RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 CFAP58Q5T655 872 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 PPP4R3AQ6IN85 833 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 C8orf74Q6P047 294 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 CCDC50Q8IVM0 306 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 SECISBP2LQ93073 1101 aaKnown RBP18.37■□□□□ 0.53
CLIP4-201ENST00000320081 CETN3O15182 167 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 KCNQ2O43526 872 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 GCNT3O95395 438 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 CACNB3P54284 484 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 FAM196AQ6ZSG2 479 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 BRINP3Q76B58 766 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 GJA3Q9Y6H8 435 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 HECW2Q9P2P5 1572 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 ALKQ9UM73 1620 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 GUCY2FP51841 1108 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 TTC19Q6DKK2 380 aaPredicted RBP18.37■□□□□ 0.53
CLIP4-201ENST00000320081 SERPINA10Q9UK55 444 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 USP21Q9UK80 565 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 MAN1B1Q9UKM7 699 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 UBE2Q2LH0YL09 131 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 CIAO1O76071 339 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 RBL2Q08999 1139 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 SMC1AQ14683 1233 aaKnown RBP18.37■□□□□ 0.53
CLIP4-201ENST00000320081 SLC35F6Q8N357 371 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 GUCY1A2P33402 732 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 KCTD1Q719H9 257 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 KIFC2Q96AC6 838 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 SENP2Q9HC62 589 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 IL6STP40189 918 aaPredicted RBP18.36■□□□□ 0.53
CLIP4-201ENST00000320081 GYS2P54840 703 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 KLHL30Q0D2K2 578 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 NAA35Q5VZE5 725 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 UHMK1Q8TAS1 419 aaKnown RBP18.36■□□□□ 0.53
CLIP4-201ENST00000320081 GDAQ9Y2T3 454 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 CPS1P31327 1500 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 FAM196BA6NMK8 535 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 KIF28PB7ZC32 967 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 GBP2P32456 591 aaPredicted RBP18.36■□□□□ 0.53
CLIP4-201ENST00000320081 TICAM2Q86XR7 235 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 RBM17Q96I25 401 aaKnown RBP18.36■□□□□ 0.53
CLIP4-201ENST00000320081 SELENOOQ9BVL4 669 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 EHMT1Q9H9B1 1298 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 ATG3Q9NT62 314 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 ATP10DQ9P241 1426 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 RPN1P04843 607 aaKnown RBP18.35■□□□□ 0.53
CLIP4-201ENST00000320081 GRM1Q13255 1194 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 HOOK3Q86VS8 718 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 MYCT1Q8N699 235 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 GJA10Q969M2 543 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 CRB1P82279 1406 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 MMP1P03956 469 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 IRX5P78411 483 aaPredicted RBP18.35■□□□□ 0.53
CLIP4-201ENST00000320081 KRT25Q7Z3Z0 450 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 PCDHA12Q9UN75 941 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 FAM205CA6NFA0 338 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 SNAP25P60880 206 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 BIRC3Q13489 604 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 SYNCQ9H7C4 482 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 GPR108Q9NPR9 543 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 IFNAR1P17181 557 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 SPATA1Q5VX52 437 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 CELF1Q92879 486 aaKnown RBP18.35■□□□□ 0.53
CLIP4-201ENST00000320081 MRPL44Q9H9J2 332 aaKnown RBP18.35■□□□□ 0.53
CLIP4-201ENST00000320081 CYP2J2P51589 502 aa18.34■□□□□ 0.53
CLIP4-201ENST00000320081 THRAP3Q9Y2W1 955 aaKnown RBP18.34■□□□□ 0.53
CLIP4-201ENST00000320081 ARPP21Q9UBL0 812 aaPredicted RBP18.34■□□□□ 0.53
CLIP4-201ENST00000320081 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.34■□□□□ 0.53
CLIP4-201ENST00000320081 KRT5P13647 590 aa18.34■□□□□ 0.53
CLIP4-201ENST00000320081 ATP6V0A2Q9Y487 856 aa18.34■□□□□ 0.53
CLIP4-201ENST00000320081 ATG9AQ7Z3C6 839 aa18.33■□□□□ 0.53
CLIP4-201ENST00000320081 PDLIM2Q96JY6 352 aa18.33■□□□□ 0.53
CLIP4-201ENST00000320081 DBNDD1Q9H9R9 158 aa18.33■□□□□ 0.53
CLIP4-201ENST00000320081 GSTA5Q7RTV2 222 aa18.33■□□□□ 0.52
CLIP4-201ENST00000320081 SMCR8Q8TEV9 937 aaPredicted RBP18.33■□□□□ 0.52
CLIP4-201ENST00000320081 SAR1BQ9Y6B6 198 aa18.33■□□□□ 0.52
CLIP4-201ENST00000320081 EPN1Q9Y6I3 576 aaPredicted RBP18.33■□□□□ 0.52
CLIP4-201ENST00000320081 PP2D1A8MPX8 630 aa18.33■□□□□ 0.52
CLIP4-201ENST00000320081 MEIS1O00470 390 aa18.33■□□□□ 0.52
CLIP4-201ENST00000320081 FMNL1O95466 1100 aaPredicted RBP18.33■□□□□ 0.52
CLIP4-201ENST00000320081 MECOMQ03112 1051 aa18.33■□□□□ 0.52
CLIP4-201ENST00000320081 GPBP1Q86WP2 473 aa18.33■□□□□ 0.52
CLIP4-201ENST00000320081 TAOK3Q9H2K8 898 aa18.33■□□□□ 0.52
CLIP4-201ENST00000320081 ANKRD65E5RJM6 399 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 EBAG9O00559 213 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 OR52Z1P0C646 297 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 SLC9C1Q4G0N8 1177 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 FAM76AQ8TAV0 307 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 IRX2Q9BZI1 471 aaPredicted RBP18.32■□□□□ 0.52
CLIP4-201ENST00000320081 TCP10L2B9ZVM9 353 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 EXOC3O60645 756 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 ATP1A2P50993 1020 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 POLR2FP61218 127 aaKnown RBP18.32■□□□□ 0.52
CLIP4-201ENST00000320081 FOXO4P98177 505 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 PABPC4Q13310 644 aaKnown RBP eCLIP18.32■□□□□ 0.52
CLIP4-201ENST00000320081 IFI16Q16666 785 aaKnown RBP18.32■□□□□ 0.52
CLIP4-201ENST00000320081 PIGSQ96S52 555 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 PSTPIP2Q9H939 334 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 SPTLC3Q9NUV7 552 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 HDAC9Q9UKV0 1011 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 SPHKAPQ2M3C7 1700 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms