RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 CFAP58Q5T655 872 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 PPP4R3AQ6IN85 833 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 C8orf74Q6P047 294 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 CCDC50Q8IVM0 306 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 SECISBP2LQ93073 1101 aaKnown RBP18.37■□□□□ 0.53
CLIP4-201ENST00000320081 CETN3O15182 167 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 KCNQ2O43526 872 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 GCNT3O95395 438 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 CACNB3P54284 484 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 FAM196AQ6ZSG2 479 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 BRINP3Q76B58 766 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 GJA3Q9Y6H8 435 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 HECW2Q9P2P5 1572 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 ALKQ9UM73 1620 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 GUCY2FP51841 1108 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 TTC19Q6DKK2 380 aaPredicted RBP18.37■□□□□ 0.53
CLIP4-201ENST00000320081 SERPINA10Q9UK55 444 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 USP21Q9UK80 565 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 MAN1B1Q9UKM7 699 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 UBE2Q2LH0YL09 131 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 CIAO1O76071 339 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 RBL2Q08999 1139 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 SMC1AQ14683 1233 aaKnown RBP18.37■□□□□ 0.53
CLIP4-201ENST00000320081 SLC35F6Q8N357 371 aa18.37■□□□□ 0.53
CLIP4-201ENST00000320081 GUCY1A2P33402 732 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 KCTD1Q719H9 257 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 KIFC2Q96AC6 838 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 SENP2Q9HC62 589 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 IL6STP40189 918 aaPredicted RBP18.36■□□□□ 0.53
CLIP4-201ENST00000320081 GYS2P54840 703 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 KLHL30Q0D2K2 578 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 NAA35Q5VZE5 725 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 UHMK1Q8TAS1 419 aaKnown RBP18.36■□□□□ 0.53
CLIP4-201ENST00000320081 GDAQ9Y2T3 454 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 CPS1P31327 1500 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 FAM196BA6NMK8 535 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 KIF28PB7ZC32 967 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 GBP2P32456 591 aaPredicted RBP18.36■□□□□ 0.53
CLIP4-201ENST00000320081 TICAM2Q86XR7 235 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 RBM17Q96I25 401 aaKnown RBP18.36■□□□□ 0.53
CLIP4-201ENST00000320081 SELENOOQ9BVL4 669 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 EHMT1Q9H9B1 1298 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 ATG3Q9NT62 314 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 ATP10DQ9P241 1426 aa18.36■□□□□ 0.53
CLIP4-201ENST00000320081 RPN1P04843 607 aaKnown RBP18.35■□□□□ 0.53
CLIP4-201ENST00000320081 GRM1Q13255 1194 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 HOOK3Q86VS8 718 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 MYCT1Q8N699 235 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 GJA10Q969M2 543 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 CRB1P82279 1406 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 MMP1P03956 469 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 IRX5P78411 483 aaPredicted RBP18.35■□□□□ 0.53
CLIP4-201ENST00000320081 KRT25Q7Z3Z0 450 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 PCDHA12Q9UN75 941 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 FAM205CA6NFA0 338 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 SNAP25P60880 206 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 BIRC3Q13489 604 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 SYNCQ9H7C4 482 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 GPR108Q9NPR9 543 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 IFNAR1P17181 557 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 SPATA1Q5VX52 437 aa18.35■□□□□ 0.53
CLIP4-201ENST00000320081 CELF1Q92879 486 aaKnown RBP18.35■□□□□ 0.53
CLIP4-201ENST00000320081 MRPL44Q9H9J2 332 aaKnown RBP18.35■□□□□ 0.53
CLIP4-201ENST00000320081 CYP2J2P51589 502 aa18.34■□□□□ 0.53
CLIP4-201ENST00000320081 THRAP3Q9Y2W1 955 aaKnown RBP18.34■□□□□ 0.53
CLIP4-201ENST00000320081 ARPP21Q9UBL0 812 aaPredicted RBP18.34■□□□□ 0.53
CLIP4-201ENST00000320081 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.34■□□□□ 0.53
CLIP4-201ENST00000320081 KRT5P13647 590 aa18.34■□□□□ 0.53
CLIP4-201ENST00000320081 ATP6V0A2Q9Y487 856 aa18.34■□□□□ 0.53
CLIP4-201ENST00000320081 ATG9AQ7Z3C6 839 aa18.33■□□□□ 0.53
CLIP4-201ENST00000320081 PDLIM2Q96JY6 352 aa18.33■□□□□ 0.53
CLIP4-201ENST00000320081 DBNDD1Q9H9R9 158 aa18.33■□□□□ 0.53
CLIP4-201ENST00000320081 GSTA5Q7RTV2 222 aa18.33■□□□□ 0.52
CLIP4-201ENST00000320081 SMCR8Q8TEV9 937 aaPredicted RBP18.33■□□□□ 0.52
CLIP4-201ENST00000320081 SAR1BQ9Y6B6 198 aa18.33■□□□□ 0.52
CLIP4-201ENST00000320081 EPN1Q9Y6I3 576 aaPredicted RBP18.33■□□□□ 0.52
CLIP4-201ENST00000320081 PP2D1A8MPX8 630 aa18.33■□□□□ 0.52
CLIP4-201ENST00000320081 MEIS1O00470 390 aa18.33■□□□□ 0.52
CLIP4-201ENST00000320081 FMNL1O95466 1100 aaPredicted RBP18.33■□□□□ 0.52
CLIP4-201ENST00000320081 MECOMQ03112 1051 aa18.33■□□□□ 0.52
CLIP4-201ENST00000320081 GPBP1Q86WP2 473 aa18.33■□□□□ 0.52
CLIP4-201ENST00000320081 TAOK3Q9H2K8 898 aa18.33■□□□□ 0.52
CLIP4-201ENST00000320081 ANKRD65E5RJM6 399 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 EBAG9O00559 213 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 OR52Z1P0C646 297 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 SLC9C1Q4G0N8 1177 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 FAM76AQ8TAV0 307 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 IRX2Q9BZI1 471 aaPredicted RBP18.32■□□□□ 0.52
CLIP4-201ENST00000320081 TCP10L2B9ZVM9 353 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 EXOC3O60645 756 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 ATP1A2P50993 1020 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 POLR2FP61218 127 aaKnown RBP18.32■□□□□ 0.52
CLIP4-201ENST00000320081 FOXO4P98177 505 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 PABPC4Q13310 644 aaKnown RBP eCLIP18.32■□□□□ 0.52
CLIP4-201ENST00000320081 IFI16Q16666 785 aaKnown RBP18.32■□□□□ 0.52
CLIP4-201ENST00000320081 PIGSQ96S52 555 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 PSTPIP2Q9H939 334 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 SPTLC3Q9NUV7 552 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 HDAC9Q9UKV0 1011 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 SPHKAPQ2M3C7 1700 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms