RNA–Protein interactions for RNA: ENST00000319410.9

KARS-202, Transcript of lysyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KARS, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-202ENST00000319410 RHBDL3P58872 404 aa11.32□□□□□ -0.6
KARS-202ENST00000319410 OTUD7BQ6GQQ9 843 aa11.32□□□□□ -0.6
KARS-202ENST00000319410 CCDC112Q8NEF3 446 aa11.32□□□□□ -0.6
KARS-202ENST00000319410 HOOK2Q96ED9 719 aa11.32□□□□□ -0.6
KARS-202ENST00000319410 TRIM17Q9Y577 477 aa11.32□□□□□ -0.6
KARS-202ENST00000319410 ENTPD3O75355 529 aa11.31□□□□□ -0.6
KARS-202ENST00000319410 PDE6AP16499 860 aa11.31□□□□□ -0.6
KARS-202ENST00000319410 CYP7A1P22680 504 aa11.31□□□□□ -0.6
KARS-202ENST00000319410 ADD2P35612 726 aa11.31□□□□□ -0.6
KARS-202ENST00000319410 TAF1CQ15572 869 aaPredicted RBP11.31□□□□□ -0.6
KARS-202ENST00000319410 SLC9C2Q5TAH2 1124 aa11.31□□□□□ -0.6
KARS-202ENST00000319410 NEK11Q8NG66 645 aa11.31□□□□□ -0.6
KARS-202ENST00000319410 LMBRD1Q9NUN5 540 aa11.31□□□□□ -0.6
KARS-202ENST00000319410 ATRNL1Q5VV63 1379 aa11.31□□□□□ -0.6
KARS-202ENST00000319410 TCRBV5S4A2TA0A5A2 114 aa11.31□□□□□ -0.6
KARS-202ENST00000319410 BTBD19C9JJ37 291 aa11.31□□□□□ -0.6
KARS-202ENST00000319410 SMC2O95347 1197 aa11.31□□□□□ -0.6
KARS-202ENST00000319410 USP8P40818 1118 aa11.31□□□□□ -0.6
KARS-202ENST00000319410 ADGRA1Q86SQ6 560 aa11.31□□□□□ -0.6
KARS-202ENST00000319410 CCDC84Q86UT8 332 aaPredicted RBP11.31□□□□□ -0.6
KARS-202ENST00000319410 FMNL3Q8IVF7 1028 aa11.31□□□□□ -0.6
KARS-202ENST00000319410 MAGEB6Q8N7X4 407 aa11.31□□□□□ -0.6
KARS-202ENST00000319410 TTC12Q9H892 705 aaPredicted RBP11.31□□□□□ -0.6
KARS-202ENST00000319410 MYO5AQ9Y4I1 1855 aaKnown RBP11.31□□□□□ -0.6
KARS-202ENST00000319410 KLHL23Q8NBE8 558 aa11.3□□□□□ -0.6
KARS-202ENST00000319410 SH3RF3Q8TEJ3 882 aaPredicted RBP11.3□□□□□ -0.6
KARS-202ENST00000319410 TSPAN18Q96SJ8 248 aa11.3□□□□□ -0.6
KARS-202ENST00000319410 TSPY26PQ9H489 355 aa11.3□□□□□ -0.6
KARS-202ENST00000319410 AATFQ9NY61 560 aaKnown RBP eCLIP11.3□□□□□ -0.6
KARS-202ENST00000319410 ETAA1Q9NY74 926 aa11.3□□□□□ -0.6
KARS-202ENST00000319410 ZNF112Q9UJU3 913 aa11.3□□□□□ -0.6
KARS-202ENST00000319410 COL2A1P02458 1487 aaPredicted RBP11.3□□□□□ -0.6
KARS-202ENST00000319410 PHF20L1A8MW92 1017 aa11.3□□□□□ -0.6
KARS-202ENST00000319410 PPIL2Q13356 520 aa11.3□□□□□ -0.6
KARS-202ENST00000319410 SNAPC2Q13487 334 aa11.3□□□□□ -0.6
KARS-202ENST00000319410 OTOP1Q7RTM1 612 aa11.3□□□□□ -0.6
KARS-202ENST00000319410 EDC3Q96F86 508 aaKnown RBP11.3□□□□□ -0.6
KARS-202ENST00000319410 RNF113AO15541 343 aaKnown RBP11.29□□□□□ -0.6
KARS-202ENST00000319410 EIF3JO75822 258 aaKnown RBP11.29□□□□□ -0.6
KARS-202ENST00000319410 CETPP11597 493 aa11.29□□□□□ -0.6
KARS-202ENST00000319410 SP3Q02447 781 aa11.29□□□□□ -0.6
KARS-202ENST00000319410 PPATQ06203 517 aa11.29□□□□□ -0.6
KARS-202ENST00000319410 SLC4A8Q2Y0W8 1093 aa11.29□□□□□ -0.6
KARS-202ENST00000319410 C1QTNF12Q5T7M4 302 aa11.29□□□□□ -0.6
KARS-202ENST00000319410 TSHZ3Q63HK5 1081 aa11.29□□□□□ -0.6
KARS-202ENST00000319410 AP1ARQ63HQ0 302 aa11.29□□□□□ -0.6
KARS-202ENST00000319410 MCTP1Q6DN14 999 aa11.29□□□□□ -0.6
KARS-202ENST00000319410 C17orf53Q8N3J3 647 aaPredicted RBP11.29□□□□□ -0.6
KARS-202ENST00000319410 ZNF532Q9HCE3 1301 aa11.29□□□□□ -0.6
KARS-202ENST00000319410 CPP00450 1065 aa11.29□□□□□ -0.6
KARS-202ENST00000319410 MLLT1Q03111 559 aaPredicted RBP11.29□□□□□ -0.6
KARS-202ENST00000319410 ADCY2Q08462 1091 aa11.29□□□□□ -0.6
KARS-202ENST00000319410 FBXO46Q6PJ61 603 aaPredicted RBP11.29□□□□□ -0.6
KARS-202ENST00000319410 TEX11Q8IYF3 940 aa11.29□□□□□ -0.6
KARS-202ENST00000319410 ZSWIM8A7E2V4 1837 aa11.28□□□□□ -0.6
KARS-202ENST00000319410 MAGEB6P1A0A0J9YX57 407 aa11.28□□□□□ -0.6
KARS-202ENST00000319410 SYCE3A1L190 88 aa11.28□□□□□ -0.6
KARS-202ENST00000319410 ZRSR1Q15695 479 aaKnown RBP11.28□□□□□ -0.6
KARS-202ENST00000319410 PKN2Q16513 984 aaKnown RBP11.28□□□□□ -0.6
KARS-202ENST00000319410 STAG1Q8WVM7 1258 aa11.28□□□□□ -0.6
KARS-202ENST00000319410 APPBP2Q92624 585 aa11.28□□□□□ -0.6
KARS-202ENST00000319410 RIOK1Q9BRS2 568 aaKnown RBP11.28□□□□□ -0.6
KARS-202ENST00000319410 ARHGAP39Q9C0H5 1083 aa11.28□□□□□ -0.6
KARS-202ENST00000319410 ZFYVE28Q9HCC9 887 aa11.28□□□□□ -0.6
KARS-202ENST00000319410 ST7Q9NRC1 585 aa11.28□□□□□ -0.6
KARS-202ENST00000319410 PSD3Q9NYI0 1048 aa11.28□□□□□ -0.6
KARS-202ENST00000319410 ZHX2Q9Y6X8 837 aa11.28□□□□□ -0.6
KARS-202ENST00000319410 MYH7P12883 1935 aa11.28□□□□□ -0.6
KARS-202ENST00000319410 HIP1O00291 1037 aa11.28□□□□□ -0.6
KARS-202ENST00000319410 MBD3O95983 291 aa11.28□□□□□ -0.6
KARS-202ENST00000319410 PAX7P23759 505 aa11.28□□□□□ -0.6
KARS-202ENST00000319410 TRAF1Q13077 416 aa11.28□□□□□ -0.6
KARS-202ENST00000319410 TTC22Q5TAA0 569 aa11.28□□□□□ -0.6
KARS-202ENST00000319410 GPT2Q8TD30 523 aa11.28□□□□□ -0.6
KARS-202ENST00000319410 RGS19P49795 217 aa11.27□□□□□ -0.6
KARS-202ENST00000319410 DYNLL1P63167 89 aaKnown RBP11.27□□□□□ -0.6
KARS-202ENST00000319410 MAPKAPK5Q8IW41 473 aa11.27□□□□□ -0.6
KARS-202ENST00000319410 SCYL3Q8IZE3 742 aa11.27□□□□□ -0.6
KARS-202ENST00000319410 MIGA1Q8NAN2 632 aa11.27□□□□□ -0.6
KARS-202ENST00000319410 RNF214Q8ND24 703 aa11.27□□□□□ -0.6
KARS-202ENST00000319410 TGFBRAP1Q8WUH2 860 aa11.27□□□□□ -0.6
KARS-202ENST00000319410 TATDN2Q93075 761 aa11.27□□□□□ -0.6
KARS-202ENST00000319410 SYAP1Q96A49 352 aaPredicted RBP11.27□□□□□ -0.6
KARS-202ENST00000319410 MIEF2Q96C03 454 aa11.27□□□□□ -0.6
KARS-202ENST00000319410 ERO1AQ96HE7 468 aa11.27□□□□□ -0.6
KARS-202ENST00000319410 FSD1Q9BTV5 496 aa11.27□□□□□ -0.6
KARS-202ENST00000319410 OSBPL5Q9H0X9 879 aaPredicted RBP11.27□□□□□ -0.6
KARS-202ENST00000319410 PICK1Q9NRD5 415 aa11.27□□□□□ -0.6
KARS-202ENST00000319410 CPA4Q9UI42 421 aa11.27□□□□□ -0.6
KARS-202ENST00000319410 PDHXO00330 501 aa11.27□□□□□ -0.61
KARS-202ENST00000319410 CAND2O75155 1236 aa11.27□□□□□ -0.61
KARS-202ENST00000319410 SETSIPP0DME0 302 aa11.27□□□□□ -0.61
KARS-202ENST00000319410 PTPRAP18433 802 aa11.27□□□□□ -0.61
KARS-202ENST00000319410 CCT2P78371 535 aaKnown RBP11.27□□□□□ -0.61
KARS-202ENST00000319410 MOGSQ13724 837 aa11.27□□□□□ -0.61
KARS-202ENST00000319410 RRP1BQ14684 758 aaKnown RBP11.27□□□□□ -0.61
KARS-202ENST00000319410 ZMYM1Q5SVZ6 1142 aa11.27□□□□□ -0.61
KARS-202ENST00000319410 NOL9Q5SY16 702 aaKnown RBP11.27□□□□□ -0.61
KARS-202ENST00000319410 GIMAP7Q8NHV1 300 aa11.27□□□□□ -0.61
KARS-202ENST00000319410 CRNKL1Q9BZJ0 848 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms