RNA–Protein interactions for RNA: ENST00000318837.6

IGSF3-201, Transcript of immunoglobulin superfamily member 3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene IGSF3, Length 3,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGSF3-201ENST00000318837 NUP88Q99567 741 aaPredicted RBP11.13□□□□□ -0.63
IGSF3-201ENST00000318837 FUT8Q9BYC5 575 aa11.13□□□□□ -0.63
IGSF3-201ENST00000318837 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.13□□□□□ -0.63
IGSF3-201ENST00000318837 NAP1L1P55209 391 aaKnown RBP11.12□□□□□ -0.63
IGSF3-201ENST00000318837 USP49Q70CQ1 688 aa11.12□□□□□ -0.63
IGSF3-201ENST00000318837 KIFC2Q96AC6 838 aa11.12□□□□□ -0.63
IGSF3-201ENST00000318837 CWC15Q9P013 229 aaKnown RBP11.12□□□□□ -0.63
IGSF3-201ENST00000318837 RPS6KA4O75676 772 aa11.12□□□□□ -0.63
IGSF3-201ENST00000318837 TNNI2P48788 182 aa11.12□□□□□ -0.63
IGSF3-201ENST00000318837 PDE4CQ08493 712 aa11.12□□□□□ -0.63
IGSF3-201ENST00000318837 CLEC4GQ6UXB4 293 aa11.12□□□□□ -0.63
IGSF3-201ENST00000318837 VPS16Q9H269 839 aa11.12□□□□□ -0.63
IGSF3-201ENST00000318837 PDE11AQ9HCR9 933 aa11.12□□□□□ -0.63
IGSF3-201ENST00000318837 ADAM21Q9UKJ8 722 aa11.12□□□□□ -0.63
IGSF3-201ENST00000318837 THRAP3Q9Y2W1 955 aaKnown RBP11.12□□□□□ -0.63
IGSF3-201ENST00000318837 BCL9O00512 1426 aa11.12□□□□□ -0.63
IGSF3-201ENST00000318837 WDR19Q8NEZ3 1342 aa11.12□□□□□ -0.63
IGSF3-201ENST00000318837 A0A0U1RQJ8 604 aa11.12□□□□□ -0.63
IGSF3-201ENST00000318837 RBL2Q08999 1139 aa11.12□□□□□ -0.63
IGSF3-201ENST00000318837 STIM1Q13586 685 aa11.12□□□□□ -0.63
IGSF3-201ENST00000318837 INF2Q27J81 1249 aa11.12□□□□□ -0.63
IGSF3-201ENST00000318837 SRGAP1Q7Z6B7 1085 aa11.12□□□□□ -0.63
IGSF3-201ENST00000318837 ATRIPQ8WXE1 791 aa11.12□□□□□ -0.63
IGSF3-201ENST00000318837 TCP11L1Q9NUJ3 509 aa11.12□□□□□ -0.63
IGSF3-201ENST00000318837 NARFQ9UHQ1 456 aa11.12□□□□□ -0.63
IGSF3-201ENST00000318837 FRMPD2Q68DX3 1309 aaPredicted RBP11.11□□□□□ -0.63
IGSF3-201ENST00000318837 BTDP43251 543 aa11.11□□□□□ -0.63
IGSF3-201ENST00000318837 EVX2Q03828 476 aa11.11□□□□□ -0.63
IGSF3-201ENST00000318837 C10orf67Q8IYJ2 551 aa11.11□□□□□ -0.63
IGSF3-201ENST00000318837 SEPT12Q8IYM1 358 aa11.11□□□□□ -0.63
IGSF3-201ENST00000318837 SH3RF3Q8TEJ3 882 aaPredicted RBP11.11□□□□□ -0.63
IGSF3-201ENST00000318837 CCDC151A5D8V7 595 aa11.11□□□□□ -0.63
IGSF3-201ENST00000318837 H3BQF6 201 aa11.11□□□□□ -0.63
IGSF3-201ENST00000318837 ERLIN1O75477 346 aa11.11□□□□□ -0.63
IGSF3-201ENST00000318837 SERPINB2P05120 415 aa11.11□□□□□ -0.63
IGSF3-201ENST00000318837 ZNF18P17022 549 aa11.11□□□□□ -0.63
IGSF3-201ENST00000318837 BRD3Q15059 726 aa11.11□□□□□ -0.63
IGSF3-201ENST00000318837 NTRK3Q16288 839 aa11.11□□□□□ -0.63
IGSF3-201ENST00000318837 KANK3Q6NY19 840 aa11.11□□□□□ -0.63
IGSF3-201ENST00000318837 CTR9Q6PD62 1173 aa11.11□□□□□ -0.63
IGSF3-201ENST00000318837 LEKR1Q6ZMV7 388 aa11.11□□□□□ -0.63
IGSF3-201ENST00000318837 LRRC47Q8N1G4 583 aaKnown RBP11.11□□□□□ -0.63
IGSF3-201ENST00000318837 STAG1Q8WVM7 1258 aa11.11□□□□□ -0.63
IGSF3-201ENST00000318837 SYMPKQ92797 1274 aaKnown RBP11.11□□□□□ -0.63
IGSF3-201ENST00000318837 CCDC102AQ96A19 550 aa11.11□□□□□ -0.63
IGSF3-201ENST00000318837 DCP1AQ9NPI6 582 aaPredicted RBP11.11□□□□□ -0.63
IGSF3-201ENST00000318837 RBM28Q9NW13 759 aaKnown RBP11.11□□□□□ -0.63
IGSF3-201ENST00000318837 FAM237AA0A1B0GTK4 181 aa11.11□□□□□ -0.63
IGSF3-201ENST00000318837 PHACTR2O75167 634 aa11.11□□□□□ -0.63
IGSF3-201ENST00000318837 PLCD1P51178 756 aa11.11□□□□□ -0.63
IGSF3-201ENST00000318837 MDM2Q00987 491 aaPredicted RBP11.11□□□□□ -0.63
IGSF3-201ENST00000318837 MORC3Q14149 939 aa11.11□□□□□ -0.63
IGSF3-201ENST00000318837 WWC2Q6AWC2 1192 aa11.11□□□□□ -0.63
IGSF3-201ENST00000318837 RAD9BQ6WBX8 426 aa11.11□□□□□ -0.63
IGSF3-201ENST00000318837 CEP112Q8N8E3 955 aa11.11□□□□□ -0.63
IGSF3-201ENST00000318837 VGLL2Q8N8G2 317 aa11.11□□□□□ -0.63
IGSF3-201ENST00000318837 FBXO2Q9UK22 296 aaPredicted RBP11.11□□□□□ -0.63
IGSF3-201ENST00000318837 CTNND2Q9UQB3 1225 aa11.11□□□□□ -0.63
IGSF3-201ENST00000318837 FGFR2P21802 821 aa11.1□□□□□ -0.63
IGSF3-201ENST00000318837 PTPREP23469 700 aa11.1□□□□□ -0.63
IGSF3-201ENST00000318837 TOB1P50616 345 aaPredicted RBP11.1□□□□□ -0.63
IGSF3-201ENST00000318837 DTHD1Q6ZMT9 781 aa11.1□□□□□ -0.63
IGSF3-201ENST00000318837 TRIM47Q96LD4 638 aa11.1□□□□□ -0.63
IGSF3-201ENST00000318837 EYA3Q99504 573 aa11.1□□□□□ -0.63
IGSF3-201ENST00000318837 TSPYL1Q9H0U9 437 aa11.1□□□□□ -0.63
IGSF3-201ENST00000318837 QTRT2Q9H974 415 aaKnown RBP11.1□□□□□ -0.63
IGSF3-201ENST00000318837 FAM217BQ9NTX9 383 aaPredicted RBP11.1□□□□□ -0.63
IGSF3-201ENST00000318837 ADGRG1Q9Y653 693 aa11.1□□□□□ -0.63
IGSF3-201ENST00000318837 CTAGE9A4FU28 777 aa11.1□□□□□ -0.63
IGSF3-201ENST00000318837 TULP2O00295 520 aa11.1□□□□□ -0.63
IGSF3-201ENST00000318837 EIF3JO75822 258 aaKnown RBP11.1□□□□□ -0.63
IGSF3-201ENST00000318837 TFRCP02786 760 aaKnown RBP11.1□□□□□ -0.63
IGSF3-201ENST00000318837 SCG2P13521 617 aa11.1□□□□□ -0.63
IGSF3-201ENST00000318837 NR1I3Q14994 352 aa11.1□□□□□ -0.63
IGSF3-201ENST00000318837 HSP90B2PQ58FF3 399 aa11.1□□□□□ -0.63
IGSF3-201ENST00000318837 IQUBQ8NA54 791 aa11.1□□□□□ -0.63
IGSF3-201ENST00000318837 RBM17Q96I25 401 aaKnown RBP11.1□□□□□ -0.63
IGSF3-201ENST00000318837 RNF216Q9NWF9 866 aaPredicted RBP11.1□□□□□ -0.63
IGSF3-201ENST00000318837 CDC23Q9UJX2 597 aa11.1□□□□□ -0.63
IGSF3-201ENST00000318837 SPATA31A5Q5VU36 1347 aa11.1□□□□□ -0.63
IGSF3-201ENST00000318837 SPATA31A7Q8IWB4 1347 aa11.1□□□□□ -0.63
IGSF3-201ENST00000318837 PARP1P09874 1014 aaKnown RBP11.1□□□□□ -0.63
IGSF3-201ENST00000318837 USP17L2Q6R6M4 530 aa11.1□□□□□ -0.63
IGSF3-201ENST00000318837 HDXQ7Z353 690 aa11.1□□□□□ -0.63
IGSF3-201ENST00000318837 SUGCTQ9HAC7 445 aa11.1□□□□□ -0.63
IGSF3-201ENST00000318837 FEZ2Q9UHY8 353 aaPredicted RBP11.1□□□□□ -0.63
IGSF3-201ENST00000318837 SYNRGQ9UMZ2 1314 aa11.09□□□□□ -0.63
IGSF3-201ENST00000318837 CCNT1O60563 726 aaKnown RBP11.09□□□□□ -0.63
IGSF3-201ENST00000318837 CASP14P31944 242 aa11.09□□□□□ -0.63
IGSF3-201ENST00000318837 TXKP42681 527 aa11.09□□□□□ -0.63
IGSF3-201ENST00000318837 ASIC1P78348 528 aa11.09□□□□□ -0.63
IGSF3-201ENST00000318837 KIAA0825Q8IV33 1275 aa11.09□□□□□ -0.63
IGSF3-201ENST00000318837 SLF2Q8IX21 1173 aa11.09□□□□□ -0.63
IGSF3-201ENST00000318837 SLC35F6Q8N357 371 aa11.09□□□□□ -0.63
IGSF3-201ENST00000318837 ACRBPQ8NEB7 543 aa11.09□□□□□ -0.63
IGSF3-201ENST00000318837 BIN2Q9UBW5 565 aaPredicted RBP11.09□□□□□ -0.63
IGSF3-201ENST00000318837 TTF2Q9UNY4 1162 aaKnown RBP11.09□□□□□ -0.63
IGSF3-201ENST00000318837 SIPA1L3O60292 1781 aaPredicted RBP11.09□□□□□ -0.63
IGSF3-201ENST00000318837 KLRF2D3W0D1 207 aa11.09□□□□□ -0.63
IGSF3-201ENST00000318837 CALML3P27482 149 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms