RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 IP6K1Q92551 441 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 FAM212AQ96EL1 285 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 DYNLL2Q96FJ2 89 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 YY1AP1Q9H869 796 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 MRPL44Q9H9J2 332 aaKnown RBP4.07□□□□□ -1.76
GEN1-201ENST00000317402 CEP350Q5VT06 3117 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 PLEKHA8P1O95397 391 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 MAP7D1Q3KQU3 841 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 CCDC65Q8IXS2 484 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 PCDHA7Q9UN72 937 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 HPS5Q9UPZ3 1129 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.07□□□□□ -1.76
GEN1-201ENST00000317402 PCDHB6Q9Y5E3 794 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 USP6P35125 1406 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 ERICH2A1L162 156 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 CUL4AQ13619 759 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 LRRC23Q53EV4 343 aaPredicted RBP4.06□□□□□ -1.76
GEN1-201ENST00000317402 SLC44A5Q8NCS7 719 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 LZTFL1Q9NQ48 299 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 ECM29Q5VYK3 1845 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 MTX1Q13505 466 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 WHAMMP3Q1A5X7 153 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 BRINP3Q76B58 766 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 SH2D3AQ9BRG2 576 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 TRIM4Q9C037 500 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 RLFQ13129 1914 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 WDR33Q9C0J8 1336 aaKnown RBP4.06□□□□□ -1.76
GEN1-201ENST00000317402 EML6Q6ZMW3 1958 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 ZSCAN5CA6NGD5 496 aaPredicted RBP4.06□□□□□ -1.76
GEN1-201ENST00000317402 NEURL1BA8MQ27 555 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 RHOXF2BP0C7M4 288 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 CNGA1P29973 690 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 G3BP1Q13283 466 aaKnown RBP eCLIP4.06□□□□□ -1.76
GEN1-201ENST00000317402 ANKRD1Q15327 319 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 SF3A1Q15459 793 aaKnown RBP4.06□□□□□ -1.76
GEN1-201ENST00000317402 DZIP3Q86Y13 1208 aaKnown RBP4.06□□□□□ -1.76
GEN1-201ENST00000317402 ANKRD13CQ8N6S4 541 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 NSUN7Q8NE18 718 aaKnown RBP4.06□□□□□ -1.76
GEN1-201ENST00000317402 TTC16Q8NEE8 873 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 CDC5LQ99459 802 aaKnown RBP4.06□□□□□ -1.76
GEN1-201ENST00000317402 SH3GL3Q99963 347 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 RHOXF2Q9BQY4 288 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 VEZTQ9HBM0 779 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 ANAPC4Q9UJX5 808 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 MRPL42Q9Y6G3 142 aaKnown RBP4.06□□□□□ -1.76
GEN1-201ENST00000317402 LAMB4A4D0S4 1761 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 PSMA5P28066 241 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 PLA2G4AP47712 749 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 ERFP50548 548 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 IL17AQ16552 155 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 DOK7Q18PE1 504 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 ANKRD13DQ6ZTN6 518 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 TTC5Q8N0Z6 440 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 KIAA1524Q8TCG1 905 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 CAPZA3Q96KX2 299 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 UTP14AQ9BVJ6 771 aaKnown RBP4.06□□□□□ -1.76
GEN1-201ENST00000317402 ZNF287Q9HBT7 754 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 PAXBP1Q9Y5B6 917 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.06□□□□□ -1.76
GEN1-201ENST00000317402 OTOGLQ3ZCN5 2332 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 SHC4Q6S5L8 630 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 ARHGEF25Q86VW2 580 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 MICU3Q86XE3 530 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 EPB41L4AQ9HCS5 686 aaPredicted RBP4.06□□□□□ -1.76
GEN1-201ENST00000317402 CNNM1Q9NRU3 951 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 BMP2KQ9NSY1 1161 aaPredicted RBP4.06□□□□□ -1.76
GEN1-201ENST00000317402 ATG3Q9NT62 314 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 GGT7Q9UJ14 662 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 CEP104O60308 925 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 NUMBP49757 651 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 DHX9Q08211 1270 aaKnown RBP4.06□□□□□ -1.76
GEN1-201ENST00000317402 POLA2Q14181 598 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 FSIP1Q8NA03 581 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 SPATA32Q96LK8 384 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 SERTAD1Q9UHV2 236 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 NPHP3-ACAD11A0A0J9YXS1 232 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 ANKRD18BA2A2Z9 1011 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 KIF5BP33176 963 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 ZNF75DP51815 510 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 TTC39AQ5SRH9 613 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 MCTP2Q6DN12 878 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 MAST3O60307 1309 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 NWD1Q149M9 1564 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 PLXNA1Q9UIW2 1896 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 SLFN14P0C7P3 912 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 CXCR5P32302 372 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 CCT6AP40227 531 aaKnown RBP4.06□□□□□ -1.76
GEN1-201ENST00000317402 NFXL1Q6ZNB6 911 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 HDAC7Q8WUI4 952 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 GPKOWQ92917 476 aaPredicted RBP eCLIP4.06□□□□□ -1.76
GEN1-201ENST00000317402 TNMDQ9H2S6 317 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 VPS54Q9P1Q0 977 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 BIN2Q9UBW5 565 aaPredicted RBP4.06□□□□□ -1.76
GEN1-201ENST00000317402 C2orf16Q68DN1 1984 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 TANC2Q9HCD6 1990 aa4.06□□□□□ -1.76
GEN1-201ENST00000317402 SDK2Q58EX2 2172 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 MED1Q15648 1581 aaPredicted RBP4.05□□□□□ -1.76
GEN1-201ENST00000317402 PFDN1O60925 122 aa4.05□□□□□ -1.76
GEN1-201ENST00000317402 F7P08709 466 aaPredicted RBP4.05□□□□□ -1.76
GEN1-201ENST00000317402 ZKSCAN8Q15776 578 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms