RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 CRYGNQ8WXF5 182 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 FERMT2Q96AC1 680 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 GMCL1Q96IK5 515 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 DEFB129Q9H1M3 183 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 PCDHA6Q9UN73 950 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 KCNJ14Q9UNX9 436 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 CEP131Q9UPN4 1083 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 PCDHA8Q9Y5H6 950 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 V9GY48 417 aaPredicted RBP8.25□□□□□ -1.09
NPHP1-201ENST00000316534 ACTN4O43707 911 aaKnown RBP8.25□□□□□ -1.09
NPHP1-201ENST00000316534 POLR3DP05423 398 aaPredicted RBP8.25□□□□□ -1.09
NPHP1-201ENST00000316534 AKR1B1P15121 316 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 XBP1P17861 261 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 NFIAQ12857 509 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 KRI1Q8N9T8 703 aaKnown RBP8.25□□□□□ -1.09
NPHP1-201ENST00000316534 DCAF4Q8WV16 495 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 TNMDQ9H2S6 317 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 PCDHB6Q9Y5E3 794 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 LAD1O00515 517 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 TTLL1O95922 423 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 ZNF543Q08ER8 600 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 NR5A1Q13285 461 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 IL17AQ16552 155 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 FSIP1Q8NA03 581 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 ZNF622Q969S3 477 aaKnown RBP eCLIP8.25□□□□□ -1.09
NPHP1-201ENST00000316534 MBOAT7Q96N66 472 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 DBNDD1Q9H9R9 158 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 MKNK2Q9HBH9 465 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 KIAA1468Q9P260 1216 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 PI4KBQ9UBF8 816 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 SAP30BPQ9UHR5 308 aaKnown RBP8.25□□□□□ -1.09
NPHP1-201ENST00000316534 DDTLA6NHG4 134 aaPredicted RBP8.24□□□□□ -1.09
NPHP1-201ENST00000316534 MYO1BO43795 1136 aa8.24□□□□□ -1.09
NPHP1-201ENST00000316534 ZNF202O95125 648 aa8.24□□□□□ -1.09
NPHP1-201ENST00000316534 GHRHRQ02643 423 aa8.24□□□□□ -1.09
NPHP1-201ENST00000316534 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.24□□□□□ -1.09
NPHP1-201ENST00000316534 HERC5Q9UII4 1024 aaKnown RBP8.24□□□□□ -1.09
NPHP1-201ENST00000316534 ATF5Q9Y2D1 282 aaPredicted RBP8.24□□□□□ -1.09
NPHP1-201ENST00000316534 LCTP09848 1927 aa8.24□□□□□ -1.09
NPHP1-201ENST00000316534 SLC26A4O43511 780 aa8.24□□□□□ -1.09
NPHP1-201ENST00000316534 STK38Q15208 465 aa8.24□□□□□ -1.09
NPHP1-201ENST00000316534 SAFBQ15424 915 aaKnown RBP eCLIP8.24□□□□□ -1.09
NPHP1-201ENST00000316534 FOXD4L6Q3SYB3 417 aaPredicted RBP8.24□□□□□ -1.09
NPHP1-201ENST00000316534 FOXD4L3Q6VB84 417 aaPredicted RBP8.24□□□□□ -1.09
NPHP1-201ENST00000316534 CMTR1Q8N1G2 835 aaKnown RBP8.24□□□□□ -1.09
NPHP1-201ENST00000316534 HSD3B7Q9H2F3 369 aa8.24□□□□□ -1.09
NPHP1-201ENST00000316534 GINM1Q9NU53 330 aa8.24□□□□□ -1.09
NPHP1-201ENST00000316534 VPS54Q9P1Q0 977 aa8.24□□□□□ -1.09
NPHP1-201ENST00000316534 ZNF500O60304 480 aaPredicted RBP8.24□□□□□ -1.09
NPHP1-201ENST00000316534 STX1AQ16623 288 aa8.24□□□□□ -1.09
NPHP1-201ENST00000316534 DEFB132Q7Z7B7 95 aa8.24□□□□□ -1.09
NPHP1-201ENST00000316534 BLIDQ8IZY5 108 aa8.24□□□□□ -1.09
NPHP1-201ENST00000316534 FAM151AQ8WW52 585 aa8.24□□□□□ -1.09
NPHP1-201ENST00000316534 PCDHAC2Q9Y5I4 1007 aa8.24□□□□□ -1.09
NPHP1-201ENST00000316534 NLRP12P59046 1061 aa8.23□□□□□ -1.09
NPHP1-201ENST00000316534 NCAPHQ15003 741 aa8.23□□□□□ -1.09
NPHP1-201ENST00000316534 CNNM4Q6P4Q7 775 aa8.23□□□□□ -1.09
NPHP1-201ENST00000316534 KRBA2Q6ZNG9 492 aa8.23□□□□□ -1.09
NPHP1-201ENST00000316534 CCDC148Q8NFR7 591 aa8.23□□□□□ -1.09
NPHP1-201ENST00000316534 NUP133Q8WUM0 1156 aa8.23□□□□□ -1.09
NPHP1-201ENST00000316534 TMX4Q9H1E5 349 aaPredicted RBP8.23□□□□□ -1.09
NPHP1-201ENST00000316534 CBX8Q9HC52 389 aa8.23□□□□□ -1.09
NPHP1-201ENST00000316534 ZNRF3Q9ULT6 936 aa8.23□□□□□ -1.09
NPHP1-201ENST00000316534 NOL7Q9UMY1 257 aaKnown RBP8.23□□□□□ -1.09
NPHP1-201ENST00000316534 FZD9O00144 591 aa8.23□□□□□ -1.09
NPHP1-201ENST00000316534 IKBKBO14920 756 aa8.23□□□□□ -1.09
NPHP1-201ENST00000316534 RPS12P25398 132 aaKnown RBP8.23□□□□□ -1.09
NPHP1-201ENST00000316534 GPATCH4Q5T3I0 446 aaKnown RBP8.23□□□□□ -1.09
NPHP1-201ENST00000316534 FAM205CA6NFA0 338 aa8.23□□□□□ -1.09
NPHP1-201ENST00000316534 NFKBIEO00221 500 aa8.23□□□□□ -1.09
NPHP1-201ENST00000316534 PPP1R11O60927 126 aaPredicted RBP8.23□□□□□ -1.09
NPHP1-201ENST00000316534 PARP1P09874 1014 aaKnown RBP8.23□□□□□ -1.09
NPHP1-201ENST00000316534 RRP1BQ14684 758 aaKnown RBP8.23□□□□□ -1.09
NPHP1-201ENST00000316534 CCDC73Q6ZRK6 1079 aa8.23□□□□□ -1.09
NPHP1-201ENST00000316534 TRIML1Q8N9V2 468 aa8.23□□□□□ -1.09
NPHP1-201ENST00000316534 KCND1Q9NSA2 647 aa8.23□□□□□ -1.09
NPHP1-201ENST00000316534 KLRF2D3W0D1 207 aa8.22□□□□□ -1.09
NPHP1-201ENST00000316534 HLA-DOAP06340 250 aa8.22□□□□□ -1.09
NPHP1-201ENST00000316534 ME1P48163 572 aa8.22□□□□□ -1.09
NPHP1-201ENST00000316534 PRELPP51888 382 aa8.22□□□□□ -1.09
NPHP1-201ENST00000316534 CFAP100Q494V2 611 aa8.22□□□□□ -1.09
NPHP1-201ENST00000316534 NOM1Q5C9Z4 860 aaKnown RBP8.22□□□□□ -1.09
NPHP1-201ENST00000316534 TMEM179Q6ZVK1 233 aa8.22□□□□□ -1.09
NPHP1-201ENST00000316534 PRMT6Q96LA8 375 aaPredicted RBP8.22□□□□□ -1.09
NPHP1-201ENST00000316534 JMJD4Q9H9V9 463 aa8.22□□□□□ -1.09
NPHP1-201ENST00000316534 COL11A1P12107 1806 aaPredicted RBP8.22□□□□□ -1.09
NPHP1-201ENST00000316534 A0A1B0GVL5 298 aa8.22□□□□□ -1.09
NPHP1-201ENST00000316534 USP17L5A8MUK1 530 aa8.22□□□□□ -1.09
NPHP1-201ENST00000316534 PSMD14O00487 310 aa8.22□□□□□ -1.09
NPHP1-201ENST00000316534 C21orf2O43822 256 aa8.22□□□□□ -1.09
NPHP1-201ENST00000316534 JAG1P78504 1218 aa8.22□□□□□ -1.09
NPHP1-201ENST00000316534 GRIN1Q05586 938 aa8.22□□□□□ -1.09
NPHP1-201ENST00000316534 COBLL1Q53SF7 1204 aa8.22□□□□□ -1.09
NPHP1-201ENST00000316534 PDXDC2PQ6P474 469 aa8.22□□□□□ -1.09
NPHP1-201ENST00000316534 BICD2Q8TD16 824 aa8.22□□□□□ -1.09
NPHP1-201ENST00000316534 RIC8AQ9NPQ8 531 aa8.22□□□□□ -1.09
NPHP1-201ENST00000316534 PIM2Q9P1W9 311 aa8.22□□□□□ -1.09
NPHP1-201ENST00000316534 CYP3A7-CYP3A51PA0A087WV96 503 aa8.22□□□□□ -1.09
NPHP1-201ENST00000316534 A0A087X0B3 334 aa8.22□□□□□ -1.09
NPHP1-201ENST00000316534 TRIM75PA6NK02 468 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms