RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 SLC12A1Q13621 1099 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 MPHOSPH6Q99547 160 aaKnown RBP9.59□□□□□ -0.87
USF3-201ENST00000316407 ANKRD20A4Q4UJ75 823 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 ANKRD20A8PQ5CZ79 823 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 ANKRD20A2Q5SQ80 823 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 ANKRD20A1Q5TYW2 823 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 AMOTL2Q9Y2J4 779 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 JAK2O60674 1132 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 MORC3Q14149 939 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 SLF2Q8IX21 1173 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 RPGRIP1Q96KN7 1286 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 DDIT3P35638 169 aa9.59□□□□□ -0.88
USF3-201ENST00000316407 NCAPH2Q6IBW4 605 aa9.59□□□□□ -0.88
USF3-201ENST00000316407 KIF1CO43896 1103 aaKnown RBP9.58□□□□□ -0.88
USF3-201ENST00000316407 S100BP04271 92 aaPredicted RBP9.58□□□□□ -0.88
USF3-201ENST00000316407 CAPRIN2Q6IMN6 1127 aaKnown RBP9.58□□□□□ -0.88
USF3-201ENST00000316407 OSBPL1AQ9BXW6 950 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 PARP2Q9UGN5 583 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 B4E1Z4 1266 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 RASSF7Q02833 373 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 P3H4Q92791 437 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 RNF113AO15541 343 aaKnown RBP9.58□□□□□ -0.88
USF3-201ENST00000316407 CEP85Q6P2H3 762 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 PROSER2Q86WR7 435 aaPredicted RBP9.58□□□□□ -0.88
USF3-201ENST00000316407 FAM227BQ96M60 508 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 DRC3Q9H069 523 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 KRT82Q9NSB4 513 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 MAGEB6P1A0A0J9YX57 407 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 EIF6P56537 245 aaKnown RBP9.58□□□□□ -0.88
USF3-201ENST00000316407 ZNF280CQ8ND82 737 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 CALUO43852 315 aaPredicted RBP9.58□□□□□ -0.88
USF3-201ENST00000316407 ATL3Q6DD88 541 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 NNTQ13423 1086 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 KRT80Q6KB66 452 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 CROCCP2Q86T23 111 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 ANKRD13CQ8N6S4 541 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 C8orf58Q8NAV2 365 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 FANCD2Q9BXW9 1451 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 ZRANB2O95218 330 aaKnown RBP eCLIP9.58□□□□□ -0.88
USF3-201ENST00000316407 PHACTR3Q96KR7 559 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 FNBP1Q96RU3 617 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 MAGED2Q9UNF1 606 aaPredicted RBP9.58□□□□□ -0.88
USF3-201ENST00000316407 PARD6BQ9BYG5 372 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 ERBB4Q15303 1308 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 KDM1AO60341 852 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 OLFML2BQ68BL8 750 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 TTBK2Q6IQ55 1244 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 CYP4F22Q6NT55 531 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 CEP19Q96LK0 163 aa9.58□□□□□ -0.88
USF3-201ENST00000316407 NCBP1Q09161 790 aaKnown RBP9.57□□□□□ -0.88
USF3-201ENST00000316407 SNX1Q13596 522 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 RIC8AQ9NPQ8 531 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.57□□□□□ -0.88
USF3-201ENST00000316407 MCF2P10911 925 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 NR1D1P20393 614 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 SLC12A2P55011 1212 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 SLC35F6Q8N357 371 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 NRBF2Q96F24 287 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 CCDC138Q96M89 665 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 KCNJ14Q9UNX9 436 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 SOWAHDA6NJG2 315 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 MAP7D3Q8IWC1 876 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 SPC25Q9HBM1 224 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 HYOU1Q9Y4L1 999 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 SNX14Q9Y5W7 946 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 GRM8O00222 908 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 ZFXP17010 805 aaPredicted RBP9.57□□□□□ -0.88
USF3-201ENST00000316407 IL9RQ01113 521 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 LGSNQ5TDP6 509 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 FAM47EQ6ZV65 393 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 BAG5Q9UL15 447 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 BEND6Q5SZJ8 279 aaPredicted RBP9.57□□□□□ -0.88
USF3-201ENST00000316407 DZIP3Q86Y13 1208 aaKnown RBP9.57□□□□□ -0.88
USF3-201ENST00000316407 NUP58Q9BVL2 599 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 METTL14Q9HCE5 456 aaKnown RBP9.57□□□□□ -0.88
USF3-201ENST00000316407 EPB41L5Q9HCM4 733 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 SAP30BPQ9UHR5 308 aaKnown RBP9.57□□□□□ -0.88
USF3-201ENST00000316407 TTC41PQ6P2S7 1318 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 PALM3A6NDB9 673 aaPredicted RBP9.57□□□□□ -0.88
USF3-201ENST00000316407 MAFGO15525 162 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 ERFP50548 548 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 HELBQ8NG08 1087 aaPredicted RBP9.57□□□□□ -0.88
USF3-201ENST00000316407 MCM9Q9NXL9 1143 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 MAD1L1Q9Y6D9 718 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 LONP1P36776 959 aaKnown RBP9.57□□□□□ -0.88
USF3-201ENST00000316407 NBPF6Q5VWK0 638 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 EXOC4Q96A65 974 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 NBPF4Q96M43 638 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 ATXN8OSP0DMR3 200 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 NBPF14Q5TI25 921 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 CASP14P31944 242 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 KDM5AP29375 1690 aaKnown RBP9.57□□□□□ -0.88
USF3-201ENST00000316407 GNGT2O14610 69 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 CFLARO15519 480 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 EVI5O60447 810 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 ATF2P15336 505 aa9.57□□□□□ -0.88
USF3-201ENST00000316407 NOP53Q9NZM5 478 aaKnown RBP9.57□□□□□ -0.88
USF3-201ENST00000316407 RDH13Q8NBN7 331 aa9.56□□□□□ -0.88
USF3-201ENST00000316407 NCF2P19878 526 aaPredicted RBP9.56□□□□□ -0.88
USF3-201ENST00000316407 AEBP2Q6ZN18 517 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms