RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 WASF1Q92558 559 aa8.69□□□□□ -1.02
TRIM55-202ENST00000315962 TEKT1Q969V4 418 aa8.69□□□□□ -1.02
TRIM55-202ENST00000315962 MAD2L2Q9UI95 211 aa8.69□□□□□ -1.02
TRIM55-202ENST00000315962 VWA3AA6NCI4 1184 aa8.69□□□□□ -1.02
TRIM55-202ENST00000315962 YDJCA8MPS7 323 aa8.69□□□□□ -1.02
TRIM55-202ENST00000315962 VGLL3A8MV65 326 aa8.69□□□□□ -1.02
TRIM55-202ENST00000315962 TCP10L2B9ZVM9 353 aa8.69□□□□□ -1.02
TRIM55-202ENST00000315962 GDF11O95390 407 aa8.69□□□□□ -1.02
TRIM55-202ENST00000315962 DPEP1P16444 411 aa8.69□□□□□ -1.02
TRIM55-202ENST00000315962 TAL1P17542 331 aaPredicted RBP8.69□□□□□ -1.02
TRIM55-202ENST00000315962 ERCC6LQ2NKX8 1250 aa8.69□□□□□ -1.02
TRIM55-202ENST00000315962 RBM26Q5T8P6 1007 aaKnown RBP8.69□□□□□ -1.02
TRIM55-202ENST00000315962 UTP14CQ5TAP6 766 aaKnown RBP8.69□□□□□ -1.02
TRIM55-202ENST00000315962 KCTD1Q719H9 257 aa8.69□□□□□ -1.02
TRIM55-202ENST00000315962 FLAD1Q8NFF5 587 aa8.69□□□□□ -1.02
TRIM55-202ENST00000315962 RNF26Q9BY78 433 aaPredicted RBP8.69□□□□□ -1.02
TRIM55-202ENST00000315962 CSRNP2Q9H175 543 aa8.69□□□□□ -1.02
TRIM55-202ENST00000315962 PDS5AQ29RF7 1337 aaKnown RBP8.69□□□□□ -1.02
TRIM55-202ENST00000315962 SHTN1A0MZ66 631 aa8.68□□□□□ -1.02
TRIM55-202ENST00000315962 SCG2P13521 617 aa8.68□□□□□ -1.02
TRIM55-202ENST00000315962 KRT2P35908 639 aa8.68□□□□□ -1.02
TRIM55-202ENST00000315962 AFMP43652 599 aa8.68□□□□□ -1.02
TRIM55-202ENST00000315962 TTBK2Q6IQ55 1244 aa8.68□□□□□ -1.02
TRIM55-202ENST00000315962 SYT10Q6XYQ8 523 aa8.68□□□□□ -1.02
TRIM55-202ENST00000315962 C15orf52Q6ZUT6 534 aaKnown RBP8.68□□□□□ -1.02
TRIM55-202ENST00000315962 TMC6Q7Z403 805 aa8.68□□□□□ -1.02
TRIM55-202ENST00000315962 PRMT6Q96LA8 375 aaPredicted RBP8.68□□□□□ -1.02
TRIM55-202ENST00000315962 ARAP2Q8WZ64 1704 aa8.68□□□□□ -1.02
TRIM55-202ENST00000315962 CNTNAP5Q8WYK1 1306 aa8.68□□□□□ -1.02
TRIM55-202ENST00000315962 COL24A1Q17RW2 1714 aa8.68□□□□□ -1.02
TRIM55-202ENST00000315962 PSDA5PKW4 1024 aaPredicted RBP8.68□□□□□ -1.02
TRIM55-202ENST00000315962 PRPF3O43395 683 aaKnown RBP8.68□□□□□ -1.02
TRIM55-202ENST00000315962 YEATS4O95619 227 aa8.68□□□□□ -1.02
TRIM55-202ENST00000315962 TPM3P06753 285 aa8.68□□□□□ -1.02
TRIM55-202ENST00000315962 XBP1P17861 261 aa8.68□□□□□ -1.02
TRIM55-202ENST00000315962 LMOD1P29536 600 aaPredicted RBP8.68□□□□□ -1.02
TRIM55-202ENST00000315962 CCZ1BP86790 482 aa8.68□□□□□ -1.02
TRIM55-202ENST00000315962 CCZ1P86791 482 aaPredicted RBP8.68□□□□□ -1.02
TRIM55-202ENST00000315962 NPY5RQ15761 445 aa8.68□□□□□ -1.02
TRIM55-202ENST00000315962 FOXP4Q8IVH2 680 aaPredicted RBP8.68□□□□□ -1.02
TRIM55-202ENST00000315962 DHX40Q8IX18 779 aaKnown RBP8.68□□□□□ -1.02
TRIM55-202ENST00000315962 SPICE1Q8N0Z3 855 aa8.68□□□□□ -1.02
TRIM55-202ENST00000315962 KIF18AQ8NI77 898 aa8.68□□□□□ -1.02
TRIM55-202ENST00000315962 COA7Q96BR5 231 aa8.68□□□□□ -1.02
TRIM55-202ENST00000315962 PHF20Q9BVI0 1012 aa8.68□□□□□ -1.02
TRIM55-202ENST00000315962 SERPINB13Q9UIV8 391 aa8.68□□□□□ -1.02
TRIM55-202ENST00000315962 KCNH3Q9ULD8 1083 aa8.68□□□□□ -1.02
TRIM55-202ENST00000315962 FAM205AQ6ZU69 1335 aa8.68□□□□□ -1.02
TRIM55-202ENST00000315962 PTGDRQ13258 359 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 WWC2Q6AWC2 1192 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 C16orf86Q6ZW13 317 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 MIGA2Q7L4E1 593 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 DHX58Q96C10 678 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 PIGSQ96S52 555 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 NUP88Q99567 741 aaPredicted RBP8.67□□□□□ -1.02
TRIM55-202ENST00000315962 IFNKQ9P0W0 207 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 ZNF831Q5JPB2 1677 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 CASZ1Q86V15 1759 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 DOCK2Q92608 1830 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 PP2D1A8MPX8 630 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 DDAH1O94760 285 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 CMA1P23946 247 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 KIF5BP33176 963 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 INF2Q27J81 1249 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 CCDC84Q86UT8 332 aaPredicted RBP8.67□□□□□ -1.02
TRIM55-202ENST00000315962 DGKHQ86XP1 1220 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 LARGE2Q8N3Y3 721 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 KRI1Q8N9T8 703 aaKnown RBP8.67□□□□□ -1.02
TRIM55-202ENST00000315962 CNNM3Q8NE01 707 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 GJA10Q969M2 543 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 ZFP91Q96JP5 570 aaPredicted RBP8.67□□□□□ -1.02
TRIM55-202ENST00000315962 GTPBP4Q9BZE4 634 aaKnown RBP8.67□□□□□ -1.02
TRIM55-202ENST00000315962 FOXP1Q9H334 677 aaPredicted RBP8.67□□□□□ -1.02
TRIM55-202ENST00000315962 GAKO14976 1311 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 A0A087X0B3 334 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 PRR29P0C7W0 189 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 CALM1P0DP23 149 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 CALM2P0DP24 149 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 CALM3P0DP25 149 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 ATP1A3P13637 1013 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 STX1AQ16623 288 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 DACT2Q5SW24 774 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 PODNQ7Z5L7 613 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 SLF2Q8IX21 1173 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 XPO4Q9C0E2 1151 aaKnown RBP8.67□□□□□ -1.02
TRIM55-202ENST00000315962 VEZTQ9HBM0 779 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 RBM28Q9NW13 759 aaKnown RBP8.67□□□□□ -1.02
TRIM55-202ENST00000315962 OGFRQ9NZT2 677 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 KIAA1468Q9P260 1216 aa8.67□□□□□ -1.02
TRIM55-202ENST00000315962 BIN2Q9UBW5 565 aaPredicted RBP8.67□□□□□ -1.02
TRIM55-202ENST00000315962 DDX41Q9UJV9 622 aaKnown RBP8.67□□□□□ -1.02
TRIM55-202ENST00000315962 DUOX1Q9NRD9 1551 aa8.66□□□□□ -1.02
TRIM55-202ENST00000315962 CHD4Q14839 1912 aa8.66□□□□□ -1.02
TRIM55-202ENST00000315962 TRIM75PA6NK02 468 aa8.66□□□□□ -1.02
TRIM55-202ENST00000315962 PARP1P09874 1014 aaKnown RBP8.66□□□□□ -1.02
TRIM55-202ENST00000315962 PLCG2P16885 1265 aa8.66□□□□□ -1.02
TRIM55-202ENST00000315962 ZYXQ15942 572 aaKnown RBP8.66□□□□□ -1.02
TRIM55-202ENST00000315962 PFKFB3Q16875 520 aaPredicted RBP8.66□□□□□ -1.02
TRIM55-202ENST00000315962 RILPL1Q5EBL4 403 aa8.66□□□□□ -1.02
TRIM55-202ENST00000315962 JAKMIP3Q5VZ66 844 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms