RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 CCT7Q99832 543 aa10.33□□□□□ -0.76
BDNF-201ENST00000314915 HESX1Q9UBX0 185 aa10.33□□□□□ -0.76
BDNF-201ENST00000314915 VPS37CA5D8V6 355 aaPredicted RBP10.32□□□□□ -0.76
BDNF-201ENST00000314915 BBOX1O75936 387 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 TRIM27P14373 513 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 MTTPP55157 894 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 USP46P62068 366 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 KCNA1Q09470 495 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 NEK10Q6ZWH5 1172 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 C11orf74Q86VG3 221 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 TRIM50Q86XT4 487 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 CCDC63Q8NA47 563 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 MYCBPAPQ8TBZ2 947 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 PDS5BQ9NTI5 1447 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 DAPK1P53355 1430 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 IQCA1LA6NCM1 817 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 PPP1R37O75864 691 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 GSTA1P08263 222 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 ATICP31939 592 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 GSTM4Q03013 218 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 ME3Q16798 604 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 ANKRD20A2Q5SQ80 823 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 ANKRD20A1Q5TYW2 823 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 ANKRD20A3Q5VUR7 823 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 ATRIPQ8WXE1 791 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 CENPOQ9BU64 300 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 KIAA1468Q9P260 1216 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 CHMP3Q9Y3E7 222 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 DISP1Q96F81 1524 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 ABCC11Q96J66 1382 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 CCDC162PA2VCL2 907 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 SPDYE5A6NIY4 337 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 ENDOUP21128 410 aaKnown RBP10.32□□□□□ -0.76
BDNF-201ENST00000314915 LMNB2Q03252 620 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 ALS2CLQ60I27 953 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 CCSAPQ6IQ19 270 aaPredicted RBP10.32□□□□□ -0.76
BDNF-201ENST00000314915 LRRC45Q96CN5 670 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 ZC3H4Q9UPT8 1303 aaKnown RBP10.32□□□□□ -0.76
BDNF-201ENST00000314915 DNM1LO00429 736 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 OPLAHO14841 1288 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 PFKFB2O60825 505 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 ZBED4O75132 1171 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 BYSLQ13895 437 aaKnown RBP10.32□□□□□ -0.76
BDNF-201ENST00000314915 PTGISQ16647 500 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 CFAP100Q494V2 611 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 PIAS4Q8N2W9 510 aaPredicted RBP10.32□□□□□ -0.76
BDNF-201ENST00000314915 TMCO5AQ8N6Q1 288 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 GDAP1Q8TB36 358 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 RIN2Q8WYP3 895 aaPredicted RBP10.32□□□□□ -0.76
BDNF-201ENST00000314915 HYPKQ9NX55 129 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 COMMD10Q9Y6G5 202 aa10.32□□□□□ -0.76
BDNF-201ENST00000314915 RGL2O15211 777 aa10.31□□□□□ -0.76
BDNF-201ENST00000314915 PCK1P35558 622 aa10.31□□□□□ -0.76
BDNF-201ENST00000314915 SUZ12Q15022 739 aaKnown RBP10.31□□□□□ -0.76
BDNF-201ENST00000314915 CDK5RAP3Q96JB5 506 aa10.31□□□□□ -0.76
BDNF-201ENST00000314915 NSD2O96028 1365 aa10.31□□□□□ -0.76
BDNF-201ENST00000314915 POTEIP0CG38 1075 aa10.31□□□□□ -0.76
BDNF-201ENST00000314915 ATP2A2P16615 1042 aaKnown RBP10.31□□□□□ -0.76
BDNF-201ENST00000314915 FUT4P22083 530 aa10.31□□□□□ -0.76
BDNF-201ENST00000314915 BDNFP23560 247 aa10.31□□□□□ -0.76
BDNF-201ENST00000314915 PRKAR2BP31323 418 aa10.31□□□□□ -0.76
BDNF-201ENST00000314915 TCERG1LQ5VWI1 586 aa10.31□□□□□ -0.76
BDNF-201ENST00000314915 CLASRPQ8N2M8 674 aaKnown RBP10.31□□□□□ -0.76
BDNF-201ENST00000314915 MIGA1Q8NAN2 632 aa10.31□□□□□ -0.76
BDNF-201ENST00000314915 HIC2Q96JB3 615 aa10.31□□□□□ -0.76
BDNF-201ENST00000314915 CATSPER2Q96P56 530 aa10.31□□□□□ -0.76
BDNF-201ENST00000314915 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.31□□□□□ -0.76
BDNF-201ENST00000314915 DRC3Q9H069 523 aa10.31□□□□□ -0.76
BDNF-201ENST00000314915 CTNNAL1Q9UBT7 734 aa10.31□□□□□ -0.76
BDNF-201ENST00000314915 BOLA2-SMG1P6H3BVE0 249 aa10.31□□□□□ -0.76
BDNF-201ENST00000314915 ALADP13716 330 aa10.31□□□□□ -0.76
BDNF-201ENST00000314915 HDGFP51858 240 aaKnown RBP10.31□□□□□ -0.76
BDNF-201ENST00000314915 SEPT7Q16181 437 aaKnown RBP10.31□□□□□ -0.76
BDNF-201ENST00000314915 GKAP1Q5VSY0 366 aaPredicted RBP10.31□□□□□ -0.76
BDNF-201ENST00000314915 KDM7AQ6ZMT4 941 aa10.31□□□□□ -0.76
BDNF-201ENST00000314915 AGAP11Q8TF27 550 aa10.31□□□□□ -0.76
BDNF-201ENST00000314915 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.31□□□□□ -0.76
BDNF-201ENST00000314915 IFT81Q8WYA0 676 aa10.31□□□□□ -0.76
BDNF-201ENST00000314915 CARD9Q9H257 536 aa10.31□□□□□ -0.76
BDNF-201ENST00000314915 SCOCQ9UIL1 159 aa10.31□□□□□ -0.76
BDNF-201ENST00000314915 CAMK2BQ13554 666 aa10.3□□□□□ -0.76
BDNF-201ENST00000314915 ZNF268Q14587 947 aaPredicted RBP10.3□□□□□ -0.76
BDNF-201ENST00000314915 SAFBQ15424 915 aaKnown RBP eCLIP10.3□□□□□ -0.76
BDNF-201ENST00000314915 PLEKHM2Q8IWE5 1019 aa10.3□□□□□ -0.76
BDNF-201ENST00000314915 RASEFQ8IZ41 740 aa10.3□□□□□ -0.76
BDNF-201ENST00000314915 FTOQ9C0B1 505 aaKnown RBP eCLIP10.3□□□□□ -0.76
BDNF-201ENST00000314915 KIF24Q5T7B8 1368 aa10.3□□□□□ -0.76
BDNF-201ENST00000314915 AGPSO00116 658 aa10.3□□□□□ -0.76
BDNF-201ENST00000314915 CYTH3O43739 400 aa10.3□□□□□ -0.76
BDNF-201ENST00000314915 PPIDQ08752 370 aaKnown RBP10.3□□□□□ -0.76
BDNF-201ENST00000314915 IMMTQ16891 758 aaKnown RBP10.3□□□□□ -0.76
BDNF-201ENST00000314915 TTC6Q86TZ1 520 aa10.3□□□□□ -0.76
BDNF-201ENST00000314915 PNMA8AQ86V59 439 aaPredicted RBP10.3□□□□□ -0.76
BDNF-201ENST00000314915 ARHGEF25Q86VW2 580 aa10.3□□□□□ -0.76
BDNF-201ENST00000314915 DHX40Q8IX18 779 aaKnown RBP10.3□□□□□ -0.76
BDNF-201ENST00000314915 NAA15Q9BXJ9 866 aaKnown RBP10.3□□□□□ -0.76
BDNF-201ENST00000314915 OSBPL7Q9BZF2 842 aa10.3□□□□□ -0.76
BDNF-201ENST00000314915 XPO4Q9C0E2 1151 aaKnown RBP10.3□□□□□ -0.76
BDNF-201ENST00000314915 COMMD8Q9NX08 183 aa10.3□□□□□ -0.76
BDNF-201ENST00000314915 STAG3Q9UJ98 1225 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms