RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 NCOA3Q9Y6Q9 1424 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 KRT83P78385 493 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 BMS1Q14692 1282 aaKnown RBP6.94□□□□□ -1.3
PRKDC-201ENST00000314191 IQCEQ6IPM2 695 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 SAMSN1Q9NSI8 373 aaKnown RBP6.94□□□□□ -1.3
PRKDC-201ENST00000314191 UBE2Q2LH0YL09 131 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 KRT86O43790 486 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 PTPREP23469 700 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 NSUN4Q96CB9 384 aaKnown RBP6.94□□□□□ -1.3
PRKDC-201ENST00000314191 GTPBP6O43824 516 aaPredicted RBP6.94□□□□□ -1.3
PRKDC-201ENST00000314191 CASP1P29466 404 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 MAEAQ7L5Y9 396 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 SH2D4AQ9H788 454 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 UBXN2AP68543 259 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 KIAA1524Q8TCG1 905 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 TSPOAP1O95153 1857 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 SLFN14P0C7P3 912 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 SPATA1Q5VX52 437 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 DGKHQ86XP1 1220 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 PCP11498 1178 aaKnown RBP6.94□□□□□ -1.3
PRKDC-201ENST00000314191 GPSM2P81274 684 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 UBE2SQ16763 222 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 FOXN1O15353 648 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 IGSF3O75054 1194 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 RHOXF2BP0C7M4 288 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 TMEM47Q9BQJ4 181 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 RHOXF2Q9BQY4 288 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 NAP1L4Q99733 375 aaKnown RBP6.94□□□□□ -1.3
PRKDC-201ENST00000314191 DESI2Q9BSY9 194 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 CENPHQ9H3R5 247 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 SLIT1O75093 1534 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 MMP10P09238 476 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 KIF5AQ12840 1032 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 CNNM4Q6P4Q7 775 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 SHC4Q6S5L8 630 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 SUPT20HQ8NEM7 779 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 IGDCC4Q8TDY8 1250 aa6.94□□□□□ -1.3
PRKDC-201ENST00000314191 FAM205CA6NFA0 338 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 FAM196BA6NMK8 535 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 TMEM232C9JQI7 657 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 IBSPP21815 317 aaPredicted RBP6.93□□□□□ -1.3
PRKDC-201ENST00000314191 KLRK1P26718 216 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 EVCP57679 992 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 STXBP4Q6ZWJ1 553 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 TUBB4AP04350 444 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 PRPF4BQ13523 1007 aaKnown RBP6.93□□□□□ -1.3
PRKDC-201ENST00000314191 RAPGEF1Q13905 1077 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 SLC4A9Q96Q91 983 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 BCS1LQ9Y276 419 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 LONP1P36776 959 aaKnown RBP6.93□□□□□ -1.3
PRKDC-201ENST00000314191 CCDC144BQ3MJ40 725 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 CCDC122Q5T0U0 273 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 TAF3Q5VWG9 929 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 PRR5LQ6MZQ0 368 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 TRIML1Q8N9V2 468 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 FLAD1Q8NFF5 587 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 ARHGEF10LQ9HCE6 1279 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 PREX1Q8TCU6 1659 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 MACROD2A1Z1Q3 448 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 POLD1P28340 1107 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.93□□□□□ -1.33e-7■■■■■ 34.2
PRKDC-201ENST00000314191 PNPLA7Q6ZV29 1317 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 ZC3H13Q5T200 1668 aaKnown RBP6.93□□□□□ -1.3
PRKDC-201ENST00000314191 ECM2O94769 699 aaPredicted RBP6.93□□□□□ -1.3
PRKDC-201ENST00000314191 FGFR2P21802 821 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 ALS2CR12Q96Q35 445 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 SERPINB13Q9UIV8 391 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 PPP1R2P41236 205 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 TMTC3Q6ZXV5 915 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 SPICE1Q8N0Z3 855 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 NEK11Q8NG66 645 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 GJD4Q96KN9 370 aaPredicted RBP6.93□□□□□ -1.3
PRKDC-201ENST00000314191 OR52Z1P0C646 297 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 CDR1P51861 262 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 VPS72Q15906 364 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 FBXO11Q86XK2 927 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 STAG2Q8N3U4 1231 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 FNBP4Q8N3X1 1017 aaPredicted RBP6.93□□□□□ -1.3
PRKDC-201ENST00000314191 CNKSR1Q969H4 720 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 ZNF215Q9UL58 517 aaPredicted RBP6.93□□□□□ -1.3
PRKDC-201ENST00000314191 IKBKBO14920 756 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 TMC4Q7Z404 712 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 SCLT1Q96NL6 688 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 SLC39A2Q9NP94 309 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 CACNB1Q02641 598 aaPredicted RBP6.93□□□□□ -1.3
PRKDC-201ENST00000314191 PCDHA12Q9UN75 941 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 ADGRB2O60241 1585 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 KCNJ18B7U540 433 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 KCNJ12Q14500 433 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 NSMFQ6X4W1 530 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 TXNRD3Q86VQ6 643 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 GSDMAQ96QA5 445 aa6.93□□□□□ -1.3
PRKDC-201ENST00000314191 RPN1P04843 607 aaKnown RBP6.92□□□□□ -1.3
PRKDC-201ENST00000314191 NLRC4Q9NPP4 1024 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 CTAGE9A4FU28 777 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 CASP14P31944 242 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 SSR1P43307 286 aaKnown RBP6.92□□□□□ -1.3
PRKDC-201ENST00000314191 BAG6P46379 1132 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 LEKR1Q6ZMV7 388 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 HS2ST1Q7LGA3 356 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms