RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 TNFRSF25Q93038 417 aa19.22■□□□□ 0.67
CLCF1-201ENST00000312438 GOLPH3LQ9H4A5 285 aa19.22■□□□□ 0.67
CLCF1-201ENST00000312438 RIOX1Q9H6W3 641 aa19.22■□□□□ 0.67
CLCF1-201ENST00000312438 CAMK4Q16566 473 aa19.21■□□□□ 0.67
CLCF1-201ENST00000312438 ABCB5Q2M3G0 1257 aa19.21■□□□□ 0.67
CLCF1-201ENST00000312438 FAM83AQ86UY5 434 aa19.21■□□□□ 0.67
CLCF1-201ENST00000312438 CLEC10AQ8IUN9 316 aa19.21■□□□□ 0.67
CLCF1-201ENST00000312438 CCDC148Q8NFR7 591 aa19.21■□□□□ 0.67
CLCF1-201ENST00000312438 NLGN2Q8NFZ4 835 aa19.21■□□□□ 0.67
CLCF1-201ENST00000312438 MYOZ2Q9NPC6 264 aa19.21■□□□□ 0.67
CLCF1-201ENST00000312438 BARHL2Q9NY43 387 aa19.21■□□□□ 0.67
CLCF1-201ENST00000312438 NOL7Q9UMY1 257 aaKnown RBP19.21■□□□□ 0.67
CLCF1-201ENST00000312438 ATP2B2Q01814 1243 aa19.21■□□□□ 0.67
CLCF1-201ENST00000312438 RBM26Q5T8P6 1007 aaKnown RBP19.21■□□□□ 0.67
CLCF1-201ENST00000312438 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.21■□□□□ 0.67
CLCF1-201ENST00000312438 VEZTQ9HBM0 779 aa19.21■□□□□ 0.67
CLCF1-201ENST00000312438 SPON1Q9HCB6 807 aa19.21■□□□□ 0.67
CLCF1-201ENST00000312438 SEC63Q9UGP8 760 aaKnown RBP19.21■□□□□ 0.67
CLCF1-201ENST00000312438 FZD9O00144 591 aa19.2■□□□□ 0.66
CLCF1-201ENST00000312438 WNT10BO00744 389 aa19.2■□□□□ 0.66
CLCF1-201ENST00000312438 CTAGE5O15320 804 aa19.2■□□□□ 0.66
CLCF1-201ENST00000312438 EEF2P13639 858 aaKnown RBP19.2■□□□□ 0.66
CLCF1-201ENST00000312438 ZNF280AP59817 542 aaPredicted RBP19.2■□□□□ 0.66
CLCF1-201ENST00000312438 ZNF543Q08ER8 600 aa19.2■□□□□ 0.66
CLCF1-201ENST00000312438 GPATCH4Q5T3I0 446 aaKnown RBP19.2■□□□□ 0.66
CLCF1-201ENST00000312438 WWC2Q6AWC2 1192 aa19.2■□□□□ 0.66
CLCF1-201ENST00000312438 RBM43Q6ZSC3 357 aaKnown RBP19.2■□□□□ 0.66
CLCF1-201ENST00000312438 RASGRP2Q7LDG7 609 aa19.2■□□□□ 0.66
CLCF1-201ENST00000312438 BLIDQ8IZY5 108 aa19.2■□□□□ 0.66
CLCF1-201ENST00000312438 CCDC12Q8WUD4 166 aaPredicted RBP19.2■□□□□ 0.66
CLCF1-201ENST00000312438 GPKOWQ92917 476 aaPredicted RBP eCLIP19.2■□□□□ 0.66
CLCF1-201ENST00000312438 FUCA2Q9BTY2 467 aa19.2■□□□□ 0.66
CLCF1-201ENST00000312438 UBA5Q9GZZ9 404 aa19.2■□□□□ 0.66
CLCF1-201ENST00000312438 PCDHA4Q9UN74 947 aa19.2■□□□□ 0.66
CLCF1-201ENST00000312438 PSME4Q14997 1843 aa19.2■□□□□ 0.66
CLCF1-201ENST00000312438 ECM29Q5VYK3 1845 aa19.2■□□□□ 0.66
CLCF1-201ENST00000312438 FRMPD2Q68DX3 1309 aaPredicted RBP19.19■□□□□ 0.66
CLCF1-201ENST00000312438 KINO60870 393 aaKnown RBP19.19■□□□□ 0.66
CLCF1-201ENST00000312438 CUTAO60888 179 aa19.19■□□□□ 0.66
CLCF1-201ENST00000312438 HEATR3Q7Z4Q2 680 aa19.19■□□□□ 0.66
CLCF1-201ENST00000312438 FMR1NBQ8N0W7 255 aaPredicted RBP19.19■□□□□ 0.66
CLCF1-201ENST00000312438 DPF2Q92785 391 aa19.19■□□□□ 0.66
CLCF1-201ENST00000312438 CPVLQ9H3G5 476 aa19.19■□□□□ 0.66
CLCF1-201ENST00000312438 VAT1LQ9HCJ6 419 aa19.19■□□□□ 0.66
CLCF1-201ENST00000312438 PCDHB6Q9Y5E3 794 aa19.19■□□□□ 0.66
CLCF1-201ENST00000312438 MORC2Q9Y6X9 1032 aaPredicted RBP19.19■□□□□ 0.66
CLCF1-201ENST00000312438 A0A1B0GVL5 298 aa19.18■□□□□ 0.66
CLCF1-201ENST00000312438 TRIM75PA6NK02 468 aa19.18■□□□□ 0.66
CLCF1-201ENST00000312438 STXBP3O00186 592 aa19.18■□□□□ 0.66
CLCF1-201ENST00000312438 CCDC192P0DO97 292 aa19.18■□□□□ 0.66
CLCF1-201ENST00000312438 TRAPPC10P48553 1259 aa19.18■□□□□ 0.66
CLCF1-201ENST00000312438 RASSF7Q02833 373 aa19.18■□□□□ 0.66
CLCF1-201ENST00000312438 SEPT2Q15019 361 aa19.18■□□□□ 0.66
CLCF1-201ENST00000312438 EARS2Q5JPH6 523 aaKnown RBP19.18■□□□□ 0.66
CLCF1-201ENST00000312438 KRI1Q8N9T8 703 aaKnown RBP19.18■□□□□ 0.66
CLCF1-201ENST00000312438 DAGLBQ8NCG7 672 aa19.18■□□□□ 0.66
CLCF1-201ENST00000312438 CNTNAP1P78357 1384 aa19.18■□□□□ 0.66
CLCF1-201ENST00000312438 hCG_1984214I3L0E3 225 aa19.18■□□□□ 0.66
CLCF1-201ENST00000312438 TBC1D12O60347 775 aa19.18■□□□□ 0.66
CLCF1-201ENST00000312438 BMP15O95972 392 aa19.18■□□□□ 0.66
CLCF1-201ENST00000312438 ATP2B1P20020 1258 aa19.18■□□□□ 0.66
CLCF1-201ENST00000312438 NDUFA8P51970 172 aa19.18■□□□□ 0.66
CLCF1-201ENST00000312438 ICA1Q05084 483 aa19.18■□□□□ 0.66
CLCF1-201ENST00000312438 NBPF9Q3BBW0 867 aa19.18■□□□□ 0.66
CLCF1-201ENST00000312438 SIAH1Q8IUQ4 282 aa19.18■□□□□ 0.66
CLCF1-201ENST00000312438 ZNF713Q8N859 430 aaPredicted RBP19.18■□□□□ 0.66
CLCF1-201ENST00000312438 PIGSQ96S52 555 aa19.18■□□□□ 0.66
CLCF1-201ENST00000312438 MYH15Q9Y2K3 1946 aa19.18■□□□□ 0.66
CLCF1-201ENST00000312438 GDF11O95390 407 aa19.17■□□□□ 0.66
CLCF1-201ENST00000312438 PTPREP23469 700 aa19.17■□□□□ 0.66
CLCF1-201ENST00000312438 TNNI2P48788 182 aa19.17■□□□□ 0.66
CLCF1-201ENST00000312438 TYW1BQ6NUM6 668 aa19.17■□□□□ 0.66
CLCF1-201ENST00000312438 HOMER1Q86YM7 354 aa19.17■□□□□ 0.66
CLCF1-201ENST00000312438 PANK2Q9BZ23 570 aa19.17■□□□□ 0.66
CLCF1-201ENST00000312438 ZMYND12Q9H0C1 365 aa19.17■□□□□ 0.66
CLCF1-201ENST00000312438 GPCPD1Q9NPB8 672 aa19.17■□□□□ 0.66
CLCF1-201ENST00000312438 FER1L6Q2WGJ9 1857 aa19.17■□□□□ 0.66
CLCF1-201ENST00000312438 FAM205CA6NFA0 338 aa19.16■□□□□ 0.66
CLCF1-201ENST00000312438 GH2P01242 217 aa19.16■□□□□ 0.66
CLCF1-201ENST00000312438 PIK3AP1Q6ZUJ8 805 aa19.16■□□□□ 0.66
CLCF1-201ENST00000312438 CKAP2LQ8IYA6 745 aa19.16■□□□□ 0.66
CLCF1-201ENST00000312438 DCAF4Q8WV16 495 aa19.16■□□□□ 0.66
CLCF1-201ENST00000312438 ANP32BQ92688 251 aaKnown RBP19.16■□□□□ 0.66
CLCF1-201ENST00000312438 FAM237AA0A1B0GTK4 181 aa19.16■□□□□ 0.66
CLCF1-201ENST00000312438 M0R2N6 131 aa19.16■□□□□ 0.66
CLCF1-201ENST00000312438 GNA11P29992 359 aa19.16■□□□□ 0.66
CLCF1-201ENST00000312438 PRELPP51888 382 aa19.16■□□□□ 0.66
CLCF1-201ENST00000312438 NAPAP54920 295 aa19.16■□□□□ 0.66
CLCF1-201ENST00000312438 CCDC96Q2M329 555 aa19.16■□□□□ 0.66
CLCF1-201ENST00000312438 SHROOM1Q2M3G4 852 aaPredicted RBP19.16■□□□□ 0.66
CLCF1-201ENST00000312438 SLFN13Q68D06 897 aa19.16■□□□□ 0.66
CLCF1-201ENST00000312438 SHC4Q6S5L8 630 aa19.16■□□□□ 0.66
CLCF1-201ENST00000312438 ZNF579Q8NAF0 562 aaKnown RBP19.16■□□□□ 0.66
CLCF1-201ENST00000312438 TMEM39BQ9GZU3 492 aa19.16■□□□□ 0.66
CLCF1-201ENST00000312438 C6orf50Q9HD87 102 aa19.16■□□□□ 0.66
CLCF1-201ENST00000312438 SYNPO2Q9UMS6 1093 aa19.16■□□□□ 0.66
CLCF1-201ENST00000312438 SRPRBQ9Y5M8 271 aaKnown RBP19.16■□□□□ 0.66
CLCF1-201ENST00000312438 BRCA1P38398 1863 aaKnown RBP19.15■□□□□ 0.66
CLCF1-201ENST00000312438 ZNF202O95125 648 aa19.15■□□□□ 0.66
CLCF1-201ENST00000312438 PFKFB1P16118 471 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms