RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 CCDC93Q567U6 631 aa15.05■□□□□ 0
CLCN6-201ENST00000312413 PCDHB13Q9Y5F0 798 aa15.05■□□□□ 0
CLCN6-201ENST00000312413 PROCA1Q8NCQ7 364 aaPredicted RBP15.05■□□□□ -0
CLCN6-201ENST00000312413 TRIM6Q9C030 488 aaPredicted RBP15.05■□□□□ -0
CLCN6-201ENST00000312413 EVI5O60447 810 aa15.05■□□□□ -0
CLCN6-201ENST00000312413 PPFIA2O75334 1257 aa15.05■□□□□ -0
CLCN6-201ENST00000312413 EIF6P56537 245 aaKnown RBP15.05■□□□□ -0
CLCN6-201ENST00000312413 IFT88Q13099 833 aa15.05■□□□□ -0
CLCN6-201ENST00000312413 NOSTRINQ8IVI9 506 aa15.05■□□□□ -0
CLCN6-201ENST00000312413 MYOCDQ8IZQ8 938 aa15.05■□□□□ -0
CLCN6-201ENST00000312413 PPP1R13BQ96KQ4 1090 aa15.05■□□□□ -0
CLCN6-201ENST00000312413 EYA3Q99504 573 aa15.05■□□□□ -0
CLCN6-201ENST00000312413 RIMS2Q9UQ26 1411 aa15.05■□□□□ -0
CLCN6-201ENST00000312413 GUCY2DQ02846 1103 aa15.05■□□□□ -0
CLCN6-201ENST00000312413 SPATA1Q5VX52 437 aa15.05■□□□□ -0
CLCN6-201ENST00000312413 HIBADHP31937 336 aaKnown RBP15.04■□□□□ -0
CLCN6-201ENST00000312413 KCTD16Q68DU8 428 aa15.04■□□□□ -0
CLCN6-201ENST00000312413 REXO1Q8N1G1 1221 aaKnown RBP15.04■□□□□ -0
CLCN6-201ENST00000312413 LRRC8CQ8TDW0 803 aa15.04■□□□□ -0
CLCN6-201ENST00000312413 RAB20Q9NX57 234 aa15.04■□□□□ -0
CLCN6-201ENST00000312413 PER1O15534 1290 aaPredicted RBP15.04■□□□□ -0
CLCN6-201ENST00000312413 CDAN1Q8IWY9 1227 aa15.04■□□□□ -0
CLCN6-201ENST00000312413 A0A087WUV0 522 aaPredicted RBP15.04■□□□□ -0
CLCN6-201ENST00000312413 FRMD3A2A2Y4 597 aa15.04■□□□□ -0
CLCN6-201ENST00000312413 PFDN1O60925 122 aa15.04■□□□□ -0
CLCN6-201ENST00000312413 IL2RBP14784 551 aa15.04■□□□□ -0
CLCN6-201ENST00000312413 CEBPAP49715 358 aaPredicted RBP15.04■□□□□ -0
CLCN6-201ENST00000312413 VPS41P49754 854 aa15.04■□□□□ -0
CLCN6-201ENST00000312413 BSPRYQ5W0U4 402 aa15.04■□□□□ -0
CLCN6-201ENST00000312413 TTC19Q6DKK2 380 aaPredicted RBP15.04■□□□□ -0
CLCN6-201ENST00000312413 UHMK1Q8TAS1 419 aaKnown RBP15.04■□□□□ -0
CLCN6-201ENST00000312413 INTS9Q9NV88 658 aaKnown RBP15.04■□□□□ -0
CLCN6-201ENST00000312413 SPECC1L-ADORA2AF8WAN1 911 aa15.03■□□□□ -0
CLCN6-201ENST00000312413 RIMBP2O15034 1052 aa15.03■□□□□ -0
CLCN6-201ENST00000312413 CNGA1P29973 690 aa15.03■□□□□ -0
CLCN6-201ENST00000312413 CDC25BP30305 580 aa15.03■□□□□ -0
CLCN6-201ENST00000312413 H2AFZP0C0S5 128 aa15.03■□□□□ -0
CLCN6-201ENST00000312413 H2AFVQ71UI9 128 aa15.03■□□□□ -0
CLCN6-201ENST00000312413 CERS3Q8IU89 383 aa15.03■□□□□ -0
CLCN6-201ENST00000312413 THOC2Q8NI27 1593 aaKnown RBP15.03■□□□□ -0
CLCN6-201ENST00000312413 RPSAP08865 295 aaKnown RBP15.03■□□□□ -0
CLCN6-201ENST00000312413 BBOF1Q8ND07 529 aa15.03■□□□□ -0
CLCN6-201ENST00000312413 WHAMMQ8TF30 809 aa15.03■□□□□ -0
CLCN6-201ENST00000312413 ARHGEF10LQ9HCE6 1279 aa15.03■□□□□ -0
CLCN6-201ENST00000312413 SBNO1A3KN83 1393 aa15.03■□□□□ -0
CLCN6-201ENST00000312413 hCG_1642624A0A1W2PR95 340 aa15.03■□□□□ -0
CLCN6-201ENST00000312413 SEC31AO94979 1220 aaKnown RBP15.03■□□□□ -0
CLCN6-201ENST00000312413 ZNF827Q17R98 1081 aa15.03■□□□□ -0
CLCN6-201ENST00000312413 ZMYM4Q5VZL5 1548 aa15.03■□□□□ -0
CLCN6-201ENST00000312413 TDRD7Q8NHU6 1098 aaKnown RBP15.03■□□□□ -0
CLCN6-201ENST00000312413 NSMCE1Q8WV22 266 aa15.03■□□□□ -0
CLCN6-201ENST00000312413 THEGQ9P2T0 379 aa15.03■□□□□ -0
CLCN6-201ENST00000312413 KDM3AQ9Y4C1 1321 aa15.03■□□□□ -0
CLCN6-201ENST00000312413 ZNF608Q9ULD9 1512 aaPredicted RBP15.03■□□□□ -0
CLCN6-201ENST00000312413 NXNQ6DKJ4 435 aa15.03■□□□□ -0
CLCN6-201ENST00000312413 RASEFQ8IZ41 740 aa15.03■□□□□ -0
CLCN6-201ENST00000312413 RUNDC3BQ96NL0 473 aa15.03■□□□□ -0
CLCN6-201ENST00000312413 ARMCX3Q9UH62 379 aaPredicted RBP15.03■□□□□ -0
CLCN6-201ENST00000312413 CHL1O00533 1208 aa15.02■□□□□ -0
CLCN6-201ENST00000312413 SERPINB6P35237 376 aa15.02■□□□□ -0
CLCN6-201ENST00000312413 SUCLG2Q96I99 432 aa15.02■□□□□ -0
CLCN6-201ENST00000312413 PCDHA7Q9UN72 937 aa15.02■□□□□ -0
CLCN6-201ENST00000312413 RNF123Q5XPI4 1314 aa15.02■□□□□ -0
CLCN6-201ENST00000312413 PFKFB2O60825 505 aa15.02□□□□□ -0.01
CLCN6-201ENST00000312413 ATP5JP18859 108 aa15.02□□□□□ -0.01
CLCN6-201ENST00000312413 SLC1A4P43007 532 aa15.02□□□□□ -0.01
CLCN6-201ENST00000312413 PKP1Q13835 747 aa15.02□□□□□ -0.01
CLCN6-201ENST00000312413 NDUFB9Q9Y6M9 179 aa15.02□□□□□ -0.01
CLCN6-201ENST00000312413 KDM5BQ9UGL1 1544 aa15.02□□□□□ -0.01
CLCN6-201ENST00000312413 PASKQ96RG2 1323 aa15.02□□□□□ -0.01
CLCN6-201ENST00000312413 GABPAQ06546 454 aa15.02□□□□□ -0.01
CLCN6-201ENST00000312413 CUL4BQ13620 913 aa15.02□□□□□ -0.01
CLCN6-201ENST00000312413 RDH13Q8NBN7 331 aa15.02□□□□□ -0.01
CLCN6-201ENST00000312413 ZNF594Q96JF6 807 aaPredicted RBP15.02□□□□□ -0.01
CLCN6-201ENST00000312413 IWS1Q96ST2 819 aa15.02□□□□□ -0.01
CLCN6-201ENST00000312413 SH3TC1Q8TE82 1336 aa15.01□□□□□ -0.01
CLCN6-201ENST00000312413 ZNF532Q9HCE3 1301 aa15.01□□□□□ -0.01
CLCN6-201ENST00000312413 DDX39AO00148 427 aaKnown RBP15.01□□□□□ -0.01
CLCN6-201ENST00000312413 WDR46O15213 610 aaKnown RBP15.01□□□□□ -0.01
CLCN6-201ENST00000312413 ATF2P15336 505 aa15.01□□□□□ -0.01
CLCN6-201ENST00000312413 IL9RQ01113 521 aa15.01□□□□□ -0.01
CLCN6-201ENST00000312413 LPIN2Q92539 896 aa15.01□□□□□ -0.01
CLCN6-201ENST00000312413 GTPBP6O43824 516 aaPredicted RBP15.01□□□□□ -0.01
CLCN6-201ENST00000312413 EPHB4P54760 987 aa15.01□□□□□ -0.01
CLCN6-201ENST00000312413 E2F5Q15329 346 aa15.01□□□□□ -0.01
CLCN6-201ENST00000312413 SLC35F6Q8N357 371 aa15.01□□□□□ -0.01
CLCN6-201ENST00000312413 HAUS8Q9BT25 410 aa15.01□□□□□ -0.01
CLCN6-201ENST00000312413 A0A1W2PP64 1363 aa15.01□□□□□ -0.01
CLCN6-201ENST00000312413 TNNI1P19237 187 aa15.01□□□□□ -0.01
CLCN6-201ENST00000312413 ZBTB17Q13105 803 aa15.01□□□□□ -0.01
CLCN6-201ENST00000312413 ZSWIM6Q9HCJ5 1215 aa15.01□□□□□ -0.01
CLCN6-201ENST00000312413 TPCN1Q9ULQ1 816 aa15.01□□□□□ -0.01
CLCN6-201ENST00000312413 ZMYM3Q14202 1370 aa15.01□□□□□ -0.01
CLCN6-201ENST00000312413 SART1O43290 800 aaKnown RBP15.01□□□□□ -0.01
CLCN6-201ENST00000312413 IFNAR2P48551 515 aa15.01□□□□□ -0.01
CLCN6-201ENST00000312413 POLR2FP61218 127 aaKnown RBP15.01□□□□□ -0.01
CLCN6-201ENST00000312413 YWHAEP62258 255 aaKnown RBP15.01□□□□□ -0.01
CLCN6-201ENST00000312413 PTPROQ16827 1216 aa15.01□□□□□ -0.01
CLCN6-201ENST00000312413 CAPN12Q6ZSI9 719 aa15.01□□□□□ -0.01
CLCN6-201ENST00000312413 ZNF654Q8IZM8 581 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms