RNA–Protein interactions for RNA: ENST00000311388.7

DEPDC7-202, Transcript of DEP domain containing 7, humanhuman

TSL 1 (best) BASIC

Gene DEPDC7, Length 2,012 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-202ENST00000311388 PSMD14O00487 310 aa18.3■□□□□ 0.52
DEPDC7-202ENST00000311388 VIL1P09327 827 aaKnown RBP18.3■□□□□ 0.52
DEPDC7-202ENST00000311388 CALML3P27482 149 aa18.3■□□□□ 0.52
DEPDC7-202ENST00000311388 C11orf57Q6ZUT1 292 aaPredicted RBP18.3■□□□□ 0.52
DEPDC7-202ENST00000311388 BLIDQ8IZY5 108 aa18.3■□□□□ 0.52
DEPDC7-202ENST00000311388 TRIM44Q96DX7 344 aaPredicted RBP18.3■□□□□ 0.52
DEPDC7-202ENST00000311388 TIGD1Q96MW7 591 aa18.3■□□□□ 0.52
DEPDC7-202ENST00000311388 BARHL2Q9NY43 387 aa18.3■□□□□ 0.52
DEPDC7-202ENST00000311388 CEP131Q9UPN4 1083 aa18.3■□□□□ 0.52
DEPDC7-202ENST00000311388 TTLL1O95922 423 aa18.3■□□□□ 0.52
DEPDC7-202ENST00000311388 SNHG28P0DPA3 235 aa18.3■□□□□ 0.52
DEPDC7-202ENST00000311388 SMARCA1P28370 1054 aa18.3■□□□□ 0.52
DEPDC7-202ENST00000311388 STX1AQ16623 288 aa18.3■□□□□ 0.52
DEPDC7-202ENST00000311388 SHROOM1Q2M3G4 852 aaPredicted RBP18.3■□□□□ 0.52
DEPDC7-202ENST00000311388 PIK3AP1Q6ZUJ8 805 aa18.3■□□□□ 0.52
DEPDC7-202ENST00000311388 CCDC125Q86Z20 511 aa18.3■□□□□ 0.52
DEPDC7-202ENST00000311388 KIAA1468Q9P260 1216 aa18.3■□□□□ 0.52
DEPDC7-202ENST00000311388 PI4KBQ9UBF8 816 aa18.3■□□□□ 0.52
DEPDC7-202ENST00000311388 PCDHA4Q9UN74 947 aa18.3■□□□□ 0.52
DEPDC7-202ENST00000311388 FRMPD2Q68DX3 1309 aaPredicted RBP18.29■□□□□ 0.52
DEPDC7-202ENST00000311388 TTC38Q5R3I4 469 aa18.29■□□□□ 0.52
DEPDC7-202ENST00000311388 HEATR3Q7Z4Q2 680 aa18.29■□□□□ 0.52
DEPDC7-202ENST00000311388 ZNF579Q8NAF0 562 aaKnown RBP18.29■□□□□ 0.52
DEPDC7-202ENST00000311388 UBA5Q9GZZ9 404 aa18.29■□□□□ 0.52
DEPDC7-202ENST00000311388 KCNH3Q9ULD8 1083 aa18.29■□□□□ 0.52
DEPDC7-202ENST00000311388 NOL7Q9UMY1 257 aaKnown RBP18.29■□□□□ 0.52
DEPDC7-202ENST00000311388 MPHOSPH10O00566 681 aaKnown RBP18.28■□□□□ 0.52
DEPDC7-202ENST00000311388 ZNF165P49910 485 aa18.28■□□□□ 0.52
DEPDC7-202ENST00000311388 TGFB2P61812 414 aa18.28■□□□□ 0.52
DEPDC7-202ENST00000311388 ZNF174Q15697 407 aa18.28■□□□□ 0.52
DEPDC7-202ENST00000311388 CCDC17Q96LX7 622 aa18.28■□□□□ 0.52
DEPDC7-202ENST00000311388 RIOX1Q9H6W3 641 aa18.28■□□□□ 0.52
DEPDC7-202ENST00000311388 PIM2Q9P1W9 311 aa18.28■□□□□ 0.52
DEPDC7-202ENST00000311388 MYH4Q9Y623 1939 aa18.28■□□□□ 0.52
DEPDC7-202ENST00000311388 ADCY5O95622 1261 aa18.28■□□□□ 0.52
DEPDC7-202ENST00000311388 TATDN1Q6P1N9 297 aa18.28■□□□□ 0.52
DEPDC7-202ENST00000311388 ZSCAN29Q8IWY8 852 aaPredicted RBP18.28■□□□□ 0.52
DEPDC7-202ENST00000311388 FAM43AQ8N2R8 423 aa18.28■□□□□ 0.52
DEPDC7-202ENST00000311388 DAGLBQ8NCG7 672 aa18.28■□□□□ 0.52
DEPDC7-202ENST00000311388 RASGRP4Q8TDF6 673 aa18.28■□□□□ 0.52
DEPDC7-202ENST00000311388 CSRNP2Q9H175 543 aa18.28■□□□□ 0.52
DEPDC7-202ENST00000311388 RRAGDQ9NQL2 400 aaPredicted RBP18.28■□□□□ 0.52
DEPDC7-202ENST00000311388 ATRNL1Q5VV63 1379 aa18.27■□□□□ 0.52
DEPDC7-202ENST00000311388 ENTPD3O75355 529 aa18.27■□□□□ 0.52
DEPDC7-202ENST00000311388 IQCB1Q15051 598 aa18.27■□□□□ 0.52
DEPDC7-202ENST00000311388 LONRF3Q496Y0 759 aa18.27■□□□□ 0.52
DEPDC7-202ENST00000311388 ASPRV1Q53RT3 343 aa18.27■□□□□ 0.52
DEPDC7-202ENST00000311388 METTL16Q86W50 562 aaKnown RBP18.27■□□□□ 0.52
DEPDC7-202ENST00000311388 PIGSQ96S52 555 aa18.27■□□□□ 0.52
DEPDC7-202ENST00000311388 VPS33BQ9H267 617 aa18.27■□□□□ 0.52
DEPDC7-202ENST00000311388 VAT1LQ9HCJ6 419 aa18.27■□□□□ 0.52
DEPDC7-202ENST00000311388 ZBTB12Q9Y330 459 aaPredicted RBP18.27■□□□□ 0.52
DEPDC7-202ENST00000311388 BRCA1P38398 1863 aaKnown RBP18.27■□□□□ 0.52
DEPDC7-202ENST00000311388 SPDYE2BA6NHP3 402 aa18.27■□□□□ 0.51
DEPDC7-202ENST00000311388 CAVIN2O95810 425 aa18.27■□□□□ 0.51
DEPDC7-202ENST00000311388 SPDYE6P0CI01 402 aa18.27■□□□□ 0.51
DEPDC7-202ENST00000311388 TRAPPC10P48553 1259 aa18.27■□□□□ 0.51
DEPDC7-202ENST00000311388 USP49Q70CQ1 688 aa18.27■□□□□ 0.51
DEPDC7-202ENST00000311388 HOMER1Q86YM7 354 aa18.27■□□□□ 0.51
DEPDC7-202ENST00000311388 FOXP4Q8IVH2 680 aaPredicted RBP18.27■□□□□ 0.51
DEPDC7-202ENST00000311388 CCDC148Q8NFR7 591 aa18.27■□□□□ 0.51
DEPDC7-202ENST00000311388 RRP36Q96EU6 259 aaKnown RBP18.27■□□□□ 0.51
DEPDC7-202ENST00000311388 RTN4Q9NQC3 1192 aaKnown RBP18.27■□□□□ 0.51
DEPDC7-202ENST00000311388 PCDHA6Q9UN73 950 aa18.27■□□□□ 0.51
DEPDC7-202ENST00000311388 PCDHA8Q9Y5H6 950 aa18.27■□□□□ 0.51
DEPDC7-202ENST00000311388 CERKLQ49MI3 558 aaPredicted RBP18.26■□□□□ 0.51
DEPDC7-202ENST00000311388 MTFR1LQ9H019 292 aa18.26■□□□□ 0.51
DEPDC7-202ENST00000311388 ANO10Q9NW15 660 aa18.26■□□□□ 0.51
DEPDC7-202ENST00000311388 ZNRF3Q9ULT6 936 aa18.26■□□□□ 0.51
DEPDC7-202ENST00000311388 COL2A1P02458 1487 aaPredicted RBP18.25■□□□□ 0.51
DEPDC7-202ENST00000311388 BMP15O95972 392 aa18.25■□□□□ 0.51
DEPDC7-202ENST00000311388 ATP2C1P98194 919 aaPredicted RBP18.25■□□□□ 0.51
DEPDC7-202ENST00000311388 ZNF543Q08ER8 600 aa18.25■□□□□ 0.51
DEPDC7-202ENST00000311388 PTGDRQ13258 359 aa18.25■□□□□ 0.51
DEPDC7-202ENST00000311388 SOGA3Q5TF21 947 aa18.25■□□□□ 0.51
DEPDC7-202ENST00000311388 GALNT17Q6IS24 598 aa18.25■□□□□ 0.51
DEPDC7-202ENST00000311388 KRBA2Q6ZNG9 492 aa18.25■□□□□ 0.51
DEPDC7-202ENST00000311388 FAM177A1Q8N128 213 aaPredicted RBP18.25■□□□□ 0.51
DEPDC7-202ENST00000311388 ZMYND12Q9H0C1 365 aa18.25■□□□□ 0.51
DEPDC7-202ENST00000311388 GPCPD1Q9NPB8 672 aa18.25■□□□□ 0.51
DEPDC7-202ENST00000311388 FER1L6Q2WGJ9 1857 aa18.25■□□□□ 0.51
DEPDC7-202ENST00000311388 HS1BP3Q53T59 392 aa18.25■□□□□ 0.51
DEPDC7-202ENST00000311388 SIAH1Q8IUQ4 282 aa18.25■□□□□ 0.51
DEPDC7-202ENST00000311388 FAM13BQ9NYF5 915 aa18.25■□□□□ 0.51
DEPDC7-202ENST00000311388 ESPNB1AK53 854 aa18.24■□□□□ 0.51
DEPDC7-202ENST00000311388 POLD1P28340 1107 aa18.24■□□□□ 0.51
DEPDC7-202ENST00000311388 NAPAP54920 295 aa18.24■□□□□ 0.51
DEPDC7-202ENST00000311388 JAG1P78504 1218 aa18.24■□□□□ 0.51
DEPDC7-202ENST00000311388 ATP2B2Q01814 1243 aa18.24■□□□□ 0.51
DEPDC7-202ENST00000311388 DALRD3Q5D0E6 543 aaKnown RBP18.24■□□□□ 0.51
DEPDC7-202ENST00000311388 TTBK2Q6IQ55 1244 aa18.24■□□□□ 0.51
DEPDC7-202ENST00000311388 NIM1KQ8IY84 436 aa18.24■□□□□ 0.51
DEPDC7-202ENST00000311388 TUBE1Q9UJT0 475 aa18.24■□□□□ 0.51
DEPDC7-202ENST00000311388 CLRN2A0PK11 232 aa18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 EEF2P13639 858 aaKnown RBP18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 PLCB2Q00722 1185 aa18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 MDM2Q00987 491 aaPredicted RBP18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 PNOCQ13519 176 aa18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 DPCR1Q3MIW9 517 aa18.23■□□□□ 0.51
DEPDC7-202ENST00000311388 C4orf32Q8N8J7 132 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms