RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 CHST3Q7LGC8 479 aa14.55□□□□□ -0.08
VANGL1-201ENST00000310260 GBA2Q9HCG7 927 aaPredicted RBP14.55□□□□□ -0.08
VANGL1-201ENST00000310260 NAV1Q8NEY1 1877 aa14.55□□□□□ -0.08
VANGL1-201ENST00000310260 NEDD4P46934 1319 aa14.54□□□□□ -0.08
VANGL1-201ENST00000310260 NR1I2O75469 434 aa14.54□□□□□ -0.08
VANGL1-201ENST00000310260 GABPAQ06546 454 aa14.54□□□□□ -0.08
VANGL1-201ENST00000310260 RAD51AP2Q09MP3 1159 aa14.54□□□□□ -0.08
VANGL1-201ENST00000310260 TRDNQ13061 729 aa14.54□□□□□ -0.08
VANGL1-201ENST00000310260 BMS1Q14692 1282 aaKnown RBP14.54□□□□□ -0.08
VANGL1-201ENST00000310260 IQCB1Q15051 598 aa14.54□□□□□ -0.08
VANGL1-201ENST00000310260 ARMC9Q7Z3E5 817 aa14.54□□□□□ -0.08
VANGL1-201ENST00000310260 CCDC84Q86UT8 332 aaPredicted RBP14.54□□□□□ -0.08
VANGL1-201ENST00000310260 NECAB1Q8N987 351 aa14.54□□□□□ -0.08
VANGL1-201ENST00000310260 NKX2-3Q8TAU0 364 aa14.54□□□□□ -0.08
VANGL1-201ENST00000310260 GTF3C6Q969F1 213 aa14.54□□□□□ -0.08
VANGL1-201ENST00000310260 CHMP4CQ96CF2 233 aa14.54□□□□□ -0.08
VANGL1-201ENST00000310260 JAKMIP1Q96N16 626 aaKnown RBP14.54□□□□□ -0.08
VANGL1-201ENST00000310260 EHD4Q9H223 541 aa14.54□□□□□ -0.08
VANGL1-201ENST00000310260 L2HGDHQ9H9P8 463 aa14.54□□□□□ -0.08
VANGL1-201ENST00000310260 FEZ2Q9UHY8 353 aaPredicted RBP14.54□□□□□ -0.08
VANGL1-201ENST00000310260 ANAPC4Q9UJX5 808 aa14.54□□□□□ -0.08
VANGL1-201ENST00000310260 CCDC69A6NI79 296 aa14.54□□□□□ -0.08
VANGL1-201ENST00000310260 IREB2P48200 963 aaKnown RBP14.54□□□□□ -0.08
VANGL1-201ENST00000310260 JAG1P78504 1218 aa14.54□□□□□ -0.08
VANGL1-201ENST00000310260 TFAP4Q01664 338 aa14.54□□□□□ -0.08
VANGL1-201ENST00000310260 ATP2B2Q01814 1243 aa14.54□□□□□ -0.08
VANGL1-201ENST00000310260 GRM1Q13255 1194 aa14.54□□□□□ -0.08
VANGL1-201ENST00000310260 STOX1Q6ZVD7 989 aa14.54□□□□□ -0.08
VANGL1-201ENST00000310260 CLMNQ96JQ2 1002 aa14.54□□□□□ -0.08
VANGL1-201ENST00000310260 ZKSCAN3Q9BRR0 538 aa14.54□□□□□ -0.08
VANGL1-201ENST00000310260 SCAND2PQ9GZW5 306 aaPredicted RBP14.54□□□□□ -0.08
VANGL1-201ENST00000310260 ZNF287Q9HBT7 754 aa14.54□□□□□ -0.08
VANGL1-201ENST00000310260 ZSWIM6Q9HCJ5 1215 aa14.54□□□□□ -0.08
VANGL1-201ENST00000310260 ABT1Q9ULW3 272 aaKnown RBP14.54□□□□□ -0.08
VANGL1-201ENST00000310260 ZMYM6O95789 1325 aa14.53□□□□□ -0.08
VANGL1-201ENST00000310260 TSPY2A6NKD2 308 aa14.53□□□□□ -0.08
VANGL1-201ENST00000310260 PHF20L1A8MW92 1017 aa14.53□□□□□ -0.08
VANGL1-201ENST00000310260 CAVIN2O95810 425 aa14.53□□□□□ -0.08
VANGL1-201ENST00000310260 GH2P01242 217 aa14.53□□□□□ -0.08
VANGL1-201ENST00000310260 AKR1B1P15121 316 aa14.53□□□□□ -0.08
VANGL1-201ENST00000310260 CLCN6P51797 869 aa14.53□□□□□ -0.08
VANGL1-201ENST00000310260 FSTL1Q12841 308 aa14.53□□□□□ -0.08
VANGL1-201ENST00000310260 COL9A3Q14050 684 aaPredicted RBP14.53□□□□□ -0.08
VANGL1-201ENST00000310260 LARP1BQ659C4 914 aaKnown RBP14.53□□□□□ -0.08
VANGL1-201ENST00000310260 RALYLQ86SE5 291 aaKnown RBP14.53□□□□□ -0.08
VANGL1-201ENST00000310260 LEO1Q8WVC0 666 aaPredicted RBP14.53□□□□□ -0.08
VANGL1-201ENST00000310260 KLRG1Q96E93 195 aa14.53□□□□□ -0.08
VANGL1-201ENST00000310260 SPATA32Q96LK8 384 aa14.53□□□□□ -0.08
VANGL1-201ENST00000310260 RNF41Q9H4P4 317 aaPredicted RBP14.53□□□□□ -0.08
VANGL1-201ENST00000310260 SWAP70Q9UH65 585 aa14.53□□□□□ -0.08
VANGL1-201ENST00000310260 SSC5DA1L4H1 1573 aa14.53□□□□□ -0.08
VANGL1-201ENST00000310260 TBC1D12O60347 775 aa14.53□□□□□ -0.08
VANGL1-201ENST00000310260 TSPY3P0CV98 308 aa14.53□□□□□ -0.08
VANGL1-201ENST00000310260 TSPY8P0CW00 308 aa14.53□□□□□ -0.08
VANGL1-201ENST00000310260 PNMA6AP0CW24 399 aaPredicted RBP14.53□□□□□ -0.08
VANGL1-201ENST00000310260 RASA1P20936 1047 aa14.53□□□□□ -0.08
VANGL1-201ENST00000310260 ABCB5Q2M3G0 1257 aa14.53□□□□□ -0.08
VANGL1-201ENST00000310260 CLEC10AQ8IUN9 316 aa14.53□□□□□ -0.08
VANGL1-201ENST00000310260 LRRN4CLQ8ND94 238 aa14.53□□□□□ -0.08
VANGL1-201ENST00000310260 STAG1Q8WVM7 1258 aa14.53□□□□□ -0.08
VANGL1-201ENST00000310260 TRERF1Q96PN7 1200 aa14.53□□□□□ -0.08
VANGL1-201ENST00000310260 TM6SF1Q9BZW5 370 aa14.53□□□□□ -0.08
VANGL1-201ENST00000310260 ELP3Q9H9T3 547 aa14.53□□□□□ -0.08
VANGL1-201ENST00000310260 TRMT1Q9NXH9 659 aaKnown RBP14.53□□□□□ -0.08
VANGL1-201ENST00000310260 FOCADQ5VW36 1801 aa14.52□□□□□ -0.08
VANGL1-201ENST00000310260 NMT2O60551 498 aa14.52□□□□□ -0.08
VANGL1-201ENST00000310260 HUNKP57058 714 aa14.52□□□□□ -0.08
VANGL1-201ENST00000310260 MAP3K9P80192 1104 aa14.52□□□□□ -0.08
VANGL1-201ENST00000310260 MKRN3Q13064 507 aaKnown RBP14.52□□□□□ -0.08
VANGL1-201ENST00000310260 ERCC6LQ2NKX8 1250 aa14.52□□□□□ -0.08
VANGL1-201ENST00000310260 C11orf57Q6ZUT1 292 aaPredicted RBP14.52□□□□□ -0.08
VANGL1-201ENST00000310260 PAXIP1Q6ZW49 1069 aaPredicted RBP14.52□□□□□ -0.08
VANGL1-201ENST00000310260 KCNB2Q92953 911 aa14.52□□□□□ -0.08
VANGL1-201ENST00000310260 TCEANC2Q96MN5 208 aa14.52□□□□□ -0.08
VANGL1-201ENST00000310260 CSADQ9Y600 493 aa14.52□□□□□ -0.08
VANGL1-201ENST00000310260 CYP46A1Q9Y6A2 500 aa14.52□□□□□ -0.08
VANGL1-201ENST00000310260 GOLGA6L4A6NEF3 574 aa14.52□□□□□ -0.09
VANGL1-201ENST00000310260 KIF2AO00139 706 aaPredicted RBP14.52□□□□□ -0.09
VANGL1-201ENST00000310260 PLA2G4AP47712 749 aa14.52□□□□□ -0.09
VANGL1-201ENST00000310260 TATDN1Q6P1N9 297 aa14.52□□□□□ -0.09
VANGL1-201ENST00000310260 METTL16Q86W50 562 aaKnown RBP14.52□□□□□ -0.09
VANGL1-201ENST00000310260 PGBD1Q96JS3 809 aa14.52□□□□□ -0.09
VANGL1-201ENST00000310260 LRRC2Q9BYS8 371 aa14.52□□□□□ -0.09
VANGL1-201ENST00000310260 CABP5Q9NP86 173 aa14.52□□□□□ -0.09
VANGL1-201ENST00000310260 PICK1Q9NRD5 415 aa14.52□□□□□ -0.09
VANGL1-201ENST00000310260 ZSWIM5Q9P217 1185 aa14.52□□□□□ -0.09
VANGL1-201ENST00000310260 TPCN1Q9ULQ1 816 aa14.52□□□□□ -0.09
VANGL1-201ENST00000310260 PASKQ96RG2 1323 aa14.51□□□□□ -0.09
VANGL1-201ENST00000310260 RAD21O60216 631 aa14.51□□□□□ -0.09
VANGL1-201ENST00000310260 CAP2P40123 477 aa14.51□□□□□ -0.09
VANGL1-201ENST00000310260 HTRA3P83110 453 aa14.51□□□□□ -0.09
VANGL1-201ENST00000310260 VGLL4Q14135 290 aa14.51□□□□□ -0.09
VANGL1-201ENST00000310260 SEPT2Q15019 361 aa14.51□□□□□ -0.09
VANGL1-201ENST00000310260 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.51□□□□□ -0.09
VANGL1-201ENST00000310260 CNKSR2Q8WXI2 1034 aa14.51□□□□□ -0.09
VANGL1-201ENST00000310260 ESR2Q92731 530 aa14.51□□□□□ -0.09
VANGL1-201ENST00000310260 SLC10A4Q96EP9 437 aa14.51□□□□□ -0.09
VANGL1-201ENST00000310260 COL2A1P02458 1487 aaPredicted RBP14.51□□□□□ -0.09
VANGL1-201ENST00000310260 GOLGA6L19H0YKK7 550 aa14.5□□□□□ -0.09
VANGL1-201ENST00000310260 CTNND1O60716 968 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms