RNA–Protein interactions for RNA: ENST00000310169.2

CHRNA9-201, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA9, Length 2,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-201ENST00000310169 KRT23Q9C075 422 aa11.46□□□□□ -0.58
CHRNA9-201ENST00000310169 LSG1Q9H089 658 aaKnown RBP11.46□□□□□ -0.58
CHRNA9-201ENST00000310169 LMBRD1Q9NUN5 540 aa11.46□□□□□ -0.58
CHRNA9-201ENST00000310169 NYAP2Q9P242 653 aa11.46□□□□□ -0.58
CHRNA9-201ENST00000310169 TACC3Q9Y6A5 838 aa11.46□□□□□ -0.58
CHRNA9-201ENST00000310169 B4E1Z4 1266 aa11.45□□□□□ -0.58
CHRNA9-201ENST00000310169 IQCA1Q86XH1 822 aa11.45□□□□□ -0.58
CHRNA9-201ENST00000310169 LPAR1Q92633 364 aa11.45□□□□□ -0.58
CHRNA9-201ENST00000310169 VCPKMTQ9H867 229 aa11.45□□□□□ -0.58
CHRNA9-201ENST00000310169 USP17L15C9J2P7 530 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 USP17L13C9JLJ4 530 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 USP17L11C9JVI0 530 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 USP17L18D6R9N7 530 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 USP17L22D6RA61 530 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 USP17L17D6RBQ6 530 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 USP17L19D6RCP7 530 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 USP17L20D6RJB6 530 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 TULP1O00294 542 aaPredicted RBP11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 ST18O60284 1047 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 NMT2O60551 498 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 KDM4AO75164 1064 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 REC8O95072 547 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 VCAM1P19320 739 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 HOXA7P31268 230 aaPredicted RBP11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 USP17L24Q0WX57 530 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 ZSCAN23Q3MJ62 389 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 UTP14CQ5TAP6 766 aaKnown RBP11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 RNF20Q5VTR2 975 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 LRSAM1Q6UWE0 723 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 ZNF296Q8WUU4 475 aaPredicted RBP11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 C12orf42Q96LP6 360 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 TANGO6Q9C0B7 1094 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 ASCC2Q9H1I8 757 aaPredicted RBP11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 CPA4Q9UI42 421 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 NEDD4P46934 1319 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 LOC285556D6RIA3 1793 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 CENPFP49454 3210 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 IGKV6D-41A0A0C4DH26 115 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 FKTNO75072 461 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 NT5C2P49902 561 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 RALYLQ86SE5 291 aaKnown RBP11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 FAM184AQ8NB25 1140 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 SYAP1Q96A49 352 aaPredicted RBP11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 RPAP3Q9H6T3 665 aaPredicted RBP11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 PRDM10Q9NQV6 1147 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 IL17RBQ9NRM6 502 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 ZSWIM5Q9P217 1185 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 PLIN4Q96Q06 1357 aa11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 GREB1LQ9C091 1923 aaPredicted RBP11.44□□□□□ -0.58
CHRNA9-201ENST00000310169 F5H6K3 240 aa11.43□□□□□ -0.58
CHRNA9-201ENST00000310169 SP3Q02447 781 aa11.43□□□□□ -0.58
CHRNA9-201ENST00000310169 KLRC3Q07444 240 aa11.43□□□□□ -0.58
CHRNA9-201ENST00000310169 UVSSAQ2YD98 709 aa11.43□□□□□ -0.58
CHRNA9-201ENST00000310169 LRRC47Q8N1G4 583 aaKnown RBP11.43□□□□□ -0.58
CHRNA9-201ENST00000310169 ZFP91Q96JP5 570 aaPredicted RBP11.43□□□□□ -0.58
CHRNA9-201ENST00000310169 PRIMPOLQ96LW4 560 aa11.43□□□□□ -0.58
CHRNA9-201ENST00000310169 ZKSCAN3Q9BRR0 538 aa11.43□□□□□ -0.58
CHRNA9-201ENST00000310169 UBAC1Q9BSL1 405 aa11.43□□□□□ -0.58
CHRNA9-201ENST00000310169 MTMR7Q9Y216 660 aa11.43□□□□□ -0.58
CHRNA9-201ENST00000310169 E7EWF7 191 aa11.43□□□□□ -0.58
CHRNA9-201ENST00000310169 HMGN5P82970 282 aaKnown RBP11.43□□□□□ -0.58
CHRNA9-201ENST00000310169 KIF22Q14807 665 aa11.43□□□□□ -0.58
CHRNA9-201ENST00000310169 NOM1Q5C9Z4 860 aaKnown RBP11.43□□□□□ -0.58
CHRNA9-201ENST00000310169 CATSPERGQ6ZRH7 1159 aa11.43□□□□□ -0.58
CHRNA9-201ENST00000310169 NCOA7Q8NI08 942 aa11.43□□□□□ -0.58
CHRNA9-201ENST00000310169 MKL1Q969V6 931 aa11.43□□□□□ -0.58
CHRNA9-201ENST00000310169 CHMP4CQ96CF2 233 aa11.43□□□□□ -0.58
CHRNA9-201ENST00000310169 P2RX7Q99572 595 aaKnown RBP11.43□□□□□ -0.58
CHRNA9-201ENST00000310169 TCP11L1Q9NUJ3 509 aa11.43□□□□□ -0.58
CHRNA9-201ENST00000310169 SLC27A2O14975 620 aa11.42□□□□□ -0.58
CHRNA9-201ENST00000310169 WDR46O15213 610 aaKnown RBP11.42□□□□□ -0.58
CHRNA9-201ENST00000310169 ECM2O94769 699 aaPredicted RBP11.42□□□□□ -0.58
CHRNA9-201ENST00000310169 ZKSCAN1P17029 563 aaPredicted RBP11.42□□□□□ -0.58
CHRNA9-201ENST00000310169 GCLCP48506 637 aaPredicted RBP11.42□□□□□ -0.58
CHRNA9-201ENST00000310169 NECTIN1Q15223 517 aa11.42□□□□□ -0.58
CHRNA9-201ENST00000310169 CCDC178Q5BJE1 867 aa11.42□□□□□ -0.58
CHRNA9-201ENST00000310169 KIAA1755Q5JYT7 1200 aa11.42□□□□□ -0.58
CHRNA9-201ENST00000310169 CREB3L3Q68CJ9 461 aa11.42□□□□□ -0.58
CHRNA9-201ENST00000310169 ANKRD13CQ8N6S4 541 aa11.42□□□□□ -0.58
CHRNA9-201ENST00000310169 TTC14Q96N46 770 aa11.42□□□□□ -0.58
CHRNA9-201ENST00000310169 HOXC10Q9NYD6 342 aa11.42□□□□□ -0.58
CHRNA9-201ENST00000310169 FLOT1O75955 427 aa11.42□□□□□ -0.58
CHRNA9-201ENST00000310169 HERVK_113P62684 666 aa11.42□□□□□ -0.58
CHRNA9-201ENST00000310169 COG2Q14746 738 aa11.42□□□□□ -0.58
CHRNA9-201ENST00000310169 C17orf99Q6UX52 265 aa11.42□□□□□ -0.58
CHRNA9-201ENST00000310169 ERO1AQ96HE7 468 aa11.42□□□□□ -0.58
CHRNA9-201ENST00000310169 SYNPO2Q9UMS6 1093 aa11.42□□□□□ -0.58
CHRNA9-201ENST00000310169 ERICH2A1L162 156 aa11.41□□□□□ -0.58
CHRNA9-201ENST00000310169 NDUFB10O96000 172 aa11.41□□□□□ -0.58
CHRNA9-201ENST00000310169 TOP1P11387 765 aaKnown RBP11.41□□□□□ -0.58
CHRNA9-201ENST00000310169 GTF2F1P35269 517 aaKnown RBP eCLIP11.41□□□□□ -0.58
CHRNA9-201ENST00000310169 ARHGEF6Q15052 776 aa11.41□□□□□ -0.58
CHRNA9-201ENST00000310169 FAM83BQ5T0W9 1011 aa11.41□□□□□ -0.58
CHRNA9-201ENST00000310169 SLFN13Q68D06 897 aa11.41□□□□□ -0.58
CHRNA9-201ENST00000310169 ZSCAN10Q96SZ4 725 aaPredicted RBP11.41□□□□□ -0.58
CHRNA9-201ENST00000310169 TAF6LQ9Y6J9 622 aa11.41□□□□□ -0.58
CHRNA9-201ENST00000310169 MCCP23508 829 aa11.4□□□□□ -0.58
CHRNA9-201ENST00000310169 SLC1A4P43007 532 aa11.4□□□□□ -0.58
CHRNA9-201ENST00000310169 SART3Q15020 963 aaKnown RBP11.4□□□□□ -0.58
CHRNA9-201ENST00000310169 DGKHQ86XP1 1220 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms