RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 PPP4R3CPQ6ZMV5 832 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 CCHCR1Q8TD31 782 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 GRK7Q8WTQ7 553 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 XAGE2Q96GT9 111 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 TBC1D32Q96NH3 1257 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 MED23Q9ULK4 1368 aa3.53□□□□□ -1.84
CLOCK-201ENST00000309964 PA2G4Q9UQ80 394 aaKnown RBP3.53□□□□□ -1.84
CLOCK-201ENST00000309964 KRT9P35527 623 aa3.53□□□□□ -1.85
CLOCK-201ENST00000309964 SFSWAPQ12872 951 aaKnown RBP3.53□□□□□ -1.85
CLOCK-201ENST00000309964 P3H4Q92791 437 aa3.53□□□□□ -1.85
CLOCK-201ENST00000309964 RAB17Q9H0T7 212 aa3.53□□□□□ -1.85
CLOCK-201ENST00000309964 MRVI1Q9Y6F6 885 aa3.53□□□□□ -1.85
CLOCK-201ENST00000309964 MICAL3Q7RTP6 2002 aa3.53□□□□□ -1.85
CLOCK-201ENST00000309964 KIF28PB7ZC32 967 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 RNF8O76064 485 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 STAT1P42224 750 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 ECE1P42892 770 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 RCAN1P53805 252 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 SLC12A2P55011 1212 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 PPFIA1Q13136 1202 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 CTR9Q6PD62 1173 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 DCUN1D2Q6PH85 259 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 ARHGAP24Q8N264 748 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 MMRN2Q9H8L6 949 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 URI1O94763 535 aaPredicted RBP3.52□□□□□ -1.85
CLOCK-201ENST00000309964 MCM7P33993 719 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 CEP85Q6P2H3 762 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 RUFY4Q6ZNE9 571 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.52□□□□□ -1.85
CLOCK-201ENST00000309964 MRGBPQ9NV56 204 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 RIMBP2O15034 1052 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 KDM4AO75164 1064 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 IBSPP21815 317 aaPredicted RBP3.52□□□□□ -1.85
CLOCK-201ENST00000309964 MYL5Q02045 173 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 MYO1EQ12965 1108 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 SLC39A6Q13433 755 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 SLFN12LQ6IEE8 588 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 CCDC50Q8IVM0 306 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 CCDC51Q96ER9 411 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 MRPL44Q9H9J2 332 aaKnown RBP3.52□□□□□ -1.85
CLOCK-201ENST00000309964 TOPORSQ9NS56 1045 aaPredicted RBP3.52□□□□□ -1.85
CLOCK-201ENST00000309964 JRKLQ9Y4A0 524 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 SRPRBQ9Y5M8 271 aaKnown RBP3.52□□□□□ -1.85
CLOCK-201ENST00000309964 SYCE3A1L190 88 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 CTAGE15A4D2H0 777 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 CCDC169A6NNP5 214 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 HEXIM1O94992 359 aaKnown RBP3.52□□□□□ -1.85
CLOCK-201ENST00000309964 CTAGE8P0CG41 777 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 PHBP35232 272 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 CCDC6Q16204 474 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 MAP3K21Q5TCX8 1036 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 KIAA1841Q6NSI8 718 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 CTAGE6Q86UF2 777 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 METTL23Q86XA0 190 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 CTAGE4Q8IX94 777 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.52□□□□□ -1.85
CLOCK-201ENST00000309964 RNF26Q9BY78 433 aaPredicted RBP3.52□□□□□ -1.85
CLOCK-201ENST00000309964 SNRKQ9NRH2 765 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 ZMYM2Q9UBW7 1377 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 BAZ2BQ9UIF8 2168 aaKnown RBP3.52□□□□□ -1.85
CLOCK-201ENST00000309964 STXBP3O00186 592 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 TRAF5O00463 557 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 MAFGO15525 162 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 PPFIA3O75145 1194 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 MBD4O95243 580 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 PAX3P23760 479 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 ZBTB16Q05516 673 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 ABCB5Q2M3G0 1257 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 LETM2Q2VYF4 491 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 CYP26C1Q6V0L0 522 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 CCDC144CPQ8IYA2 1237 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 TCP11Q8WWU5 503 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 SLC10A4Q96EP9 437 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 ORAI2Q96SN7 254 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 KATNAL1Q9BW62 490 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 PSTPIP2Q9H939 334 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 PLCB1Q9NQ66 1216 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 UTP6Q9NYH9 597 aaKnown RBP3.52□□□□□ -1.85
CLOCK-201ENST00000309964 DPP7Q9UHL4 492 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 USP32Q8NFA0 1604 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 ESPNB1AK53 854 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 SRGAP2BP0DMP2 458 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 GAP43P17677 238 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 LONP1P36776 959 aaKnown RBP3.52□□□□□ -1.85
CLOCK-201ENST00000309964 HAND2P61296 217 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 IGBP1P78318 339 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 ARHGAP4P98171 946 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 PPP1R7Q15435 360 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 GEN1Q17RS7 908 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 PNMA8AQ86V59 439 aaPredicted RBP3.52□□□□□ -1.85
CLOCK-201ENST00000309964 FBXO11Q86XK2 927 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 ELMOD1Q8N336 334 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 GPATCH11Q8N954 259 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.52□□□□□ -1.85
CLOCK-201ENST00000309964 THUMPD2Q9BTF0 503 aaKnown RBP3.52□□□□□ -1.85
CLOCK-201ENST00000309964 ZNF408Q9H9D4 720 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 SPON1Q9HCB6 807 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 ZBTB40Q9NUA8 1239 aa3.52□□□□□ -1.85
CLOCK-201ENST00000309964 AATFQ9NY61 560 aaKnown RBP eCLIP3.52□□□□□ -1.85
CLOCK-201ENST00000309964 IPO5O00410 1097 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms