RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 CLEC4GQ6UXB4 293 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 ARFGAP2Q8N6H7 521 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 SMARCC2Q8TAQ2 1214 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 IFT81Q8WYA0 676 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 WDR70Q9NW82 654 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 KCNH3Q9ULD8 1083 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 SH2B2O14492 632 aaPredicted RBP10.35□□□□□ -0.75
XCR1-201ENST00000309285 UFL1O94874 794 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 TUBB4BP68371 445 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 CFAP58Q5T655 872 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 DHX58Q96C10 678 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 TRIM47Q96LD4 638 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 RTEL1Q9NZ71 1219 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 VPS54Q9P1Q0 977 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 TBCAO75347 108 aaKnown RBP10.35□□□□□ -0.75
XCR1-201ENST00000309285 RFC1P35251 1148 aaPredicted RBP10.35□□□□□ -0.75
XCR1-201ENST00000309285 ST3GAL1Q11201 340 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 MCTP2Q6DN12 878 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 CYB5R4Q7L1T6 521 aa10.35□□□□□ -0.75
XCR1-201ENST00000309285 BAG1Q99933 345 aaPredicted RBP10.35□□□□□ -0.75
XCR1-201ENST00000309285 SPATA31A1Q5TZJ5 1347 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 CYP2D7A0A087X1C5 515 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 CCT5P48643 541 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 CCDC174Q6PII3 467 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 CCDC50Q8IVM0 306 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 LMNTD2Q8IXW0 634 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 BCAS4Q8TDM0 211 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 CABS1Q96KC9 395 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 SLC4A9Q96Q91 983 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 SELENOSQ9BQE4 189 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 NSRP1Q9H0G5 558 aaKnown RBP10.34□□□□□ -0.75
XCR1-201ENST00000309285 SAP30BPQ9UHR5 308 aaKnown RBP10.34□□□□□ -0.75
XCR1-201ENST00000309285 PRDM4Q9UKN5 801 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 ODF2LQ9ULJ1 636 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 COL15A1P39059 1388 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 LACTBP83111 547 aaPredicted RBP10.34□□□□□ -0.75
XCR1-201ENST00000309285 LINC00301Q8NCQ3 95 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 EHBP1Q8NDI1 1231 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 CELF1Q92879 486 aaKnown RBP10.34□□□□□ -0.75
XCR1-201ENST00000309285 DNAI2Q9GZS0 605 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 DDX41Q9UJV9 622 aaKnown RBP10.34□□□□□ -0.75
XCR1-201ENST00000309285 AKR1B10O60218 316 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 PFKFB1P16118 471 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 KRT2P35908 639 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 KIF23Q02241 960 aaPredicted RBP10.34□□□□□ -0.75
XCR1-201ENST00000309285 PDE11AQ9HCR9 933 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 KIAA1468Q9P260 1216 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 HDAC9Q9UKV0 1011 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 CAMTA2O94983 1202 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 NCBP1Q09161 790 aaKnown RBP10.34□□□□□ -0.75
XCR1-201ENST00000309285 FBXO38Q6PIJ6 1188 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 FAM196AQ6ZSG2 479 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 GPR161Q8N6U8 529 aaKnown RBP10.34□□□□□ -0.75
XCR1-201ENST00000309285 KIAA1524Q8TCG1 905 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 N4BP2L2Q92802 583 aaPredicted RBP10.34□□□□□ -0.75
XCR1-201ENST00000309285 FERMT2Q96AC1 680 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 SPAG5Q96R06 1193 aa10.34□□□□□ -0.75
XCR1-201ENST00000309285 NOSTRINQ8IVI9 506 aa10.33□□□□□ -0.76
XCR1-201ENST00000309285 PDLIM2Q96JY6 352 aa10.33□□□□□ -0.76
XCR1-201ENST00000309285 CLIC6Q96NY7 704 aa10.33□□□□□ -0.76
XCR1-201ENST00000309285 ZNF804BA4D1E1 1349 aa10.33□□□□□ -0.76
XCR1-201ENST00000309285 POLR2DO15514 142 aaKnown RBP10.33□□□□□ -0.76
XCR1-201ENST00000309285 ZNF174Q15697 407 aa10.33□□□□□ -0.76
XCR1-201ENST00000309285 EFCAB13Q8IY85 973 aa10.33□□□□□ -0.76
XCR1-201ENST00000309285 JDP2Q8WYK2 163 aa10.33□□□□□ -0.76
XCR1-201ENST00000309285 NEDD4P46934 1319 aa10.33□□□□□ -0.76
XCR1-201ENST00000309285 E2F5Q15329 346 aa10.33□□□□□ -0.76
XCR1-201ENST00000309285 KANK3Q6NY19 840 aa10.33□□□□□ -0.76
XCR1-201ENST00000309285 RGS22Q8NE09 1264 aa10.33□□□□□ -0.76
XCR1-201ENST00000309285 FAM212AQ96EL1 285 aa10.33□□□□□ -0.76
XCR1-201ENST00000309285 BSDC1Q9NW68 430 aaPredicted RBP10.33□□□□□ -0.76
XCR1-201ENST00000309285 MINPP1Q9UNW1 487 aa10.33□□□□□ -0.76
XCR1-201ENST00000309285 MED1Q15648 1581 aaPredicted RBP10.33□□□□□ -0.76
XCR1-201ENST00000309285 GOLGA6BA6NDN3 693 aa10.33□□□□□ -0.76
XCR1-201ENST00000309285 HGSO14964 777 aaPredicted RBP10.33□□□□□ -0.76
XCR1-201ENST00000309285 VAV2P52735 878 aa10.33□□□□□ -0.76
XCR1-201ENST00000309285 NEDD9Q14511 834 aa10.33□□□□□ -0.76
XCR1-201ENST00000309285 NAA30Q147X3 362 aaPredicted RBP10.33□□□□□ -0.76
XCR1-201ENST00000309285 TLDC2A0PJX2 215 aa10.32□□□□□ -0.76
XCR1-201ENST00000309285 SMIM23A6NLE4 172 aa10.32□□□□□ -0.76
XCR1-201ENST00000309285 GYS2P54840 703 aa10.32□□□□□ -0.76
XCR1-201ENST00000309285 NAPAP54920 295 aa10.32□□□□□ -0.76
XCR1-201ENST00000309285 WHAMMP3Q1A5X7 153 aa10.32□□□□□ -0.76
XCR1-201ENST00000309285 TBC1D9BQ66K14 1250 aa10.32□□□□□ -0.76
XCR1-201ENST00000309285 ZSCAN10Q96SZ4 725 aaPredicted RBP10.32□□□□□ -0.76
XCR1-201ENST00000309285 SEPT10Q9P0V9 454 aa10.32□□□□□ -0.76
XCR1-201ENST00000309285 NRBP1Q9UHY1 535 aa10.32□□□□□ -0.76
XCR1-201ENST00000309285 CTDNEP1O95476 244 aa10.32□□□□□ -0.76
XCR1-201ENST00000309285 MCM7P33993 719 aa10.32□□□□□ -0.76
XCR1-201ENST00000309285 LIFRP42702 1097 aa10.32□□□□□ -0.76
XCR1-201ENST00000309285 TFAP4Q01664 338 aa10.32□□□□□ -0.76
XCR1-201ENST00000309285 INTS5Q6P9B9 1019 aaKnown RBP10.32□□□□□ -0.76
XCR1-201ENST00000309285 DPH6Q7L8W6 267 aa10.32□□□□□ -0.76
XCR1-201ENST00000309285 NCAPGQ9BPX3 1015 aa10.32□□□□□ -0.76
XCR1-201ENST00000309285 POLR3EQ9NVU0 708 aa10.32□□□□□ -0.76
XCR1-201ENST00000309285 SAMD15Q9P1V8 674 aa10.32□□□□□ -0.76
XCR1-201ENST00000309285 FAM208AQ9UK61 1670 aaKnown RBP10.32□□□□□ -0.76
XCR1-201ENST00000309285 VWA3AA6NCI4 1184 aa10.32□□□□□ -0.76
XCR1-201ENST00000309285 GSG1L2A8MUP6 293 aa10.32□□□□□ -0.76
XCR1-201ENST00000309285 CUTAO60888 179 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms