RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 IRF2BPLQ9H1B7 796 aa9.65□□□□□ -0.86
CHD6-201ENST00000309279 ELP3Q9H9T3 547 aa9.65□□□□□ -0.86
CHD6-201ENST00000309279 ANO2Q9NQ90 1003 aa9.65□□□□□ -0.86
CHD6-201ENST00000309279 TACC3Q9Y6A5 838 aa9.65□□□□□ -0.86
CHD6-201ENST00000309279 GREB1LQ9C091 1923 aaPredicted RBP9.65□□□□□ -0.86
CHD6-201ENST00000309279 HOXA2O43364 376 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 RRP9O43818 475 aaKnown RBP9.64□□□□□ -0.87
CHD6-201ENST00000309279 REC8O95072 547 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 CYP21A2P08686 494 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 GUCY1A2P33402 732 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 GJA5P36382 358 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 NT5C2P49902 561 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 TBX4P57082 545 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 HAND2P61296 217 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 CTDSPL2Q05D32 466 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 BIRC2Q13490 618 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 ABCB5Q2M3G0 1257 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 SHROOM1Q2M3G4 852 aaPredicted RBP9.64□□□□□ -0.87
CHD6-201ENST00000309279 AKNAD1Q5T1N1 836 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 CYP4F22Q6NT55 531 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 OPTNQ96CV9 577 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 WNK4Q96J92 1243 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 CAPNS2Q96L46 248 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 RPS6KC1Q96S38 1066 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 MKNK2Q9HBH9 465 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 INCENPQ9NQS7 918 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 PICK1Q9NRD5 415 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 CUEDC1Q9NWM3 386 aaPredicted RBP9.64□□□□□ -0.87
CHD6-201ENST00000309279 ZBTB21Q9ULJ3 1066 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 RBM8AQ9Y5S9 174 aaKnown RBP9.64□□□□□ -0.87
CHD6-201ENST00000309279 PTPRFP10586 1907 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 USP17L5A8MUK1 530 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 IRF6O14896 467 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 PRDM1O75626 825 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 GDF11O95390 407 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 GH2P01242 217 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 AKR1B1P15121 316 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 VEGFBP49765 207 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 NOGQ13253 232 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 PPIL2Q13356 520 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 ICE2Q659A1 982 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 MFSD6Q6ZSS7 791 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 TMEM179Q6ZVK1 233 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 TBC1D10CQ8IV04 446 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 ZNF444Q8N0Y2 327 aaPredicted RBP9.64□□□□□ -0.87
CHD6-201ENST00000309279 ZNF830Q96NB3 372 aaPredicted RBP9.64□□□□□ -0.87
CHD6-201ENST00000309279 WDR18Q9BV38 432 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.64□□□□□ -0.87
CHD6-201ENST00000309279 BRINP2Q9C0B6 783 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 RNF41Q9H4P4 317 aaPredicted RBP9.64□□□□□ -0.87
CHD6-201ENST00000309279 CABP5Q9NP86 173 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 PRR12Q9ULL5 1215 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 KCNH4Q9UQ05 1017 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 AFG3L2Q9Y4W6 797 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 ZHX2Q9Y6X8 837 aa9.64□□□□□ -0.87
CHD6-201ENST00000309279 WDR33Q9C0J8 1336 aaKnown RBP9.63□□□□□ -0.87
CHD6-201ENST00000309279 CXCL11O14625 94 aa9.63□□□□□ -0.87
CHD6-201ENST00000309279 IBSPP21815 317 aaPredicted RBP9.63□□□□□ -0.87
CHD6-201ENST00000309279 MAP2K2P36507 400 aa9.63□□□□□ -0.87
CHD6-201ENST00000309279 POU5F1Q01860 360 aaKnown RBP9.63□□□□□ -0.87
CHD6-201ENST00000309279 PLEKHG6Q3KR16 790 aa9.63□□□□□ -0.87
CHD6-201ENST00000309279 TSGA10IPQ3SY00 556 aa9.63□□□□□ -0.87
CHD6-201ENST00000309279 C8orf34Q49A92 452 aa9.63□□□□□ -0.87
CHD6-201ENST00000309279 STK11IPQ8N1F8 1099 aa9.63□□□□□ -0.87
CHD6-201ENST00000309279 NEDD1Q8NHV4 660 aa9.63□□□□□ -0.87
CHD6-201ENST00000309279 GLMNQ92990 594 aa9.63□□□□□ -0.87
CHD6-201ENST00000309279 OTUD5Q96G74 571 aa9.63□□□□□ -0.87
CHD6-201ENST00000309279 MS4A4AQ96JQ5 239 aa9.63□□□□□ -0.87
CHD6-201ENST00000309279 MAP3K20Q9NYL2 800 aaKnown RBP9.63□□□□□ -0.87
CHD6-201ENST00000309279 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.63□□□□□ -0.87
CHD6-201ENST00000309279 PLIN4Q96Q06 1357 aa9.63□□□□□ -0.87
CHD6-201ENST00000309279 THSD7BQ9C0I4 1608 aa9.62□□□□□ -0.87
CHD6-201ENST00000309279 IGKV6D-41A0A0C4DH26 115 aa9.62□□□□□ -0.87
CHD6-201ENST00000309279 HSPA4P34932 840 aa9.62□□□□□ -0.87
CHD6-201ENST00000309279 TFAP4Q01664 338 aa9.62□□□□□ -0.87
CHD6-201ENST00000309279 SEPT2Q15019 361 aa9.62□□□□□ -0.87
CHD6-201ENST00000309279 CREB3L3Q68CJ9 461 aa9.62□□□□□ -0.87
CHD6-201ENST00000309279 PCGF5Q86SE9 256 aa9.62□□□□□ -0.87
CHD6-201ENST00000309279 SIAH1Q8IUQ4 282 aa9.62□□□□□ -0.87
CHD6-201ENST00000309279 REM2Q8IYK8 340 aaPredicted RBP9.62□□□□□ -0.87
CHD6-201ENST00000309279 ZNF280CQ8ND82 737 aa9.62□□□□□ -0.87
CHD6-201ENST00000309279 SNRNP27Q8WVK2 155 aaKnown RBP9.62□□□□□ -0.87
CHD6-201ENST00000309279 USP26Q9BXU7 913 aa9.62□□□□□ -0.87
CHD6-201ENST00000309279 KANSL2Q9H9L4 492 aa9.62□□□□□ -0.87
CHD6-201ENST00000309279 AS3MTQ9HBK9 375 aa9.62□□□□□ -0.87
CHD6-201ENST00000309279 MANSC4A6NHS7 340 aaPredicted RBP9.61□□□□□ -0.87
CHD6-201ENST00000309279 MPHOSPH10O00566 681 aaKnown RBP9.61□□□□□ -0.87
CHD6-201ENST00000309279 SLC27A2O14975 620 aa9.61□□□□□ -0.87
CHD6-201ENST00000309279 TSPY3P0CV98 308 aa9.61□□□□□ -0.87
CHD6-201ENST00000309279 TSPY8P0CW00 308 aa9.61□□□□□ -0.87
CHD6-201ENST00000309279 TM4SF4P48230 202 aa9.61□□□□□ -0.87
CHD6-201ENST00000309279 NOVP48745 357 aa9.61□□□□□ -0.87
CHD6-201ENST00000309279 GTF2A2P52657 109 aa9.61□□□□□ -0.87
CHD6-201ENST00000309279 BACE1P56817 501 aa9.61□□□□□ -0.87
CHD6-201ENST00000309279 INHBEP58166 350 aa9.61□□□□□ -0.87
CHD6-201ENST00000309279 SPP2Q13103 211 aa9.61□□□□□ -0.87
CHD6-201ENST00000309279 RAB3GAP1Q15042 981 aa9.61□□□□□ -0.87
CHD6-201ENST00000309279 TCEAL1Q15170 157 aa9.61□□□□□ -0.87
CHD6-201ENST00000309279 AMHR2Q16671 573 aa9.61□□□□□ -0.87
CHD6-201ENST00000309279 CCDC144BQ3MJ40 725 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms