RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 PBX1P40424 430 aa12.52□□□□□ -0.41
PTPN7-201ENST00000309017 CCDC181Q5TID7 509 aa12.52□□□□□ -0.41
PTPN7-201ENST00000309017 TTC19Q6DKK2 380 aaPredicted RBP12.52□□□□□ -0.41
PTPN7-201ENST00000309017 SND1Q7KZF4 910 aaKnown RBP eCLIP12.52□□□□□ -0.41
PTPN7-201ENST00000309017 PSMB7Q99436 277 aa12.52□□□□□ -0.41
PTPN7-201ENST00000309017 RMND1Q9NWS8 449 aa12.52□□□□□ -0.41
PTPN7-201ENST00000309017 TRIM49BA6NDI0 452 aa12.52□□□□□ -0.41
PTPN7-201ENST00000309017 NAP1L1P55209 391 aaKnown RBP12.52□□□□□ -0.41
PTPN7-201ENST00000309017 MRPS25P82663 173 aaKnown RBP12.52□□□□□ -0.41
PTPN7-201ENST00000309017 EARS2Q5JPH6 523 aaKnown RBP12.52□□□□□ -0.41
PTPN7-201ENST00000309017 SDR42E1Q8WUS8 393 aa12.52□□□□□ -0.41
PTPN7-201ENST00000309017 HPCAL4Q9UM19 191 aa12.52□□□□□ -0.41
PTPN7-201ENST00000309017 ITIH6Q6UXX5 1313 aa12.52□□□□□ -0.41
PTPN7-201ENST00000309017 ABCC12Q96J65 1359 aa12.51□□□□□ -0.41
PTPN7-201ENST00000309017 GSG1L2A8MUP6 293 aa12.51□□□□□ -0.41
PTPN7-201ENST00000309017 CTSWP56202 376 aa12.51□□□□□ -0.41
PTPN7-201ENST00000309017 C2orf54Q08AI8 447 aa12.51□□□□□ -0.41
PTPN7-201ENST00000309017 PUM3Q15397 648 aaKnown RBP12.51□□□□□ -0.41
PTPN7-201ENST00000309017 CCDC96Q2M329 555 aa12.51□□□□□ -0.41
PTPN7-201ENST00000309017 DNAJC10Q8IXB1 793 aa12.51□□□□□ -0.41
PTPN7-201ENST00000309017 GPATCH11Q8N954 259 aa12.51□□□□□ -0.41
PTPN7-201ENST00000309017 SPATA20Q8TB22 786 aa12.51□□□□□ -0.41
PTPN7-201ENST00000309017 RNF26Q9BY78 433 aaPredicted RBP12.51□□□□□ -0.41
PTPN7-201ENST00000309017 PRDM11Q9NQV5 511 aa12.51□□□□□ -0.41
PTPN7-201ENST00000309017 RWDD2AQ9UIY3 292 aa12.51□□□□□ -0.41
PTPN7-201ENST00000309017 MTMR7Q9Y216 660 aa12.51□□□□□ -0.41
PTPN7-201ENST00000309017 PARP1P09874 1014 aaKnown RBP12.51□□□□□ -0.41
PTPN7-201ENST00000309017 CYP7A1P22680 504 aa12.51□□□□□ -0.41
PTPN7-201ENST00000309017 CORO7P57737 925 aa12.51□□□□□ -0.41
PTPN7-201ENST00000309017 SPA17Q15506 151 aa12.51□□□□□ -0.41
PTPN7-201ENST00000309017 WDR93Q6P2C0 686 aa12.51□□□□□ -0.41
PTPN7-201ENST00000309017 COG1Q8WTW3 980 aa12.51□□□□□ -0.41
PTPN7-201ENST00000309017 FAM107BQ9H098 131 aa12.51□□□□□ -0.41
PTPN7-201ENST00000309017 TMOD3Q9NYL9 352 aa12.51□□□□□ -0.41
PTPN7-201ENST00000309017 LIMA1Q9UHB6 759 aaKnown RBP12.51□□□□□ -0.41
PTPN7-201ENST00000309017 NOP2P46087 812 aaKnown RBP12.51□□□□□ -0.41
PTPN7-201ENST00000309017 KIF5AQ12840 1032 aa12.51□□□□□ -0.41
PTPN7-201ENST00000309017 E2F4Q16254 413 aa12.51□□□□□ -0.41
PTPN7-201ENST00000309017 IQCA1Q86XH1 822 aa12.51□□□□□ -0.41
PTPN7-201ENST00000309017 SELENOOQ9BVL4 669 aa12.51□□□□□ -0.41
PTPN7-201ENST00000309017 ZNF185O15231 689 aa12.5□□□□□ -0.41
PTPN7-201ENST00000309017 PLEKHA8P1O95397 391 aa12.5□□□□□ -0.41
PTPN7-201ENST00000309017 RPN1P04843 607 aaKnown RBP12.5□□□□□ -0.41
PTPN7-201ENST00000309017 PPARAQ07869 468 aa12.5□□□□□ -0.41
PTPN7-201ENST00000309017 RASGRF1Q13972 1273 aa12.5□□□□□ -0.41
PTPN7-201ENST00000309017 EFCAB13Q8IY85 973 aa12.5□□□□□ -0.41
PTPN7-201ENST00000309017 BCAS4Q8TDM0 211 aa12.5□□□□□ -0.41
PTPN7-201ENST00000309017 LPIN2Q92539 896 aa12.5□□□□□ -0.41
PTPN7-201ENST00000309017 PCDH11XQ9BZA7 1347 aa12.5□□□□□ -0.41
PTPN7-201ENST00000309017 PCDH11YQ9BZA8 1340 aa12.5□□□□□ -0.41
PTPN7-201ENST00000309017 RTL9Q8NET4 1388 aa12.5□□□□□ -0.41
PTPN7-201ENST00000309017 KAT6BQ8WYB5 2073 aa12.5□□□□□ -0.41
PTPN7-201ENST00000309017 GTPBP6O43824 516 aaPredicted RBP12.5□□□□□ -0.41
PTPN7-201ENST00000309017 STARD3NLO95772 234 aa12.5□□□□□ -0.41
PTPN7-201ENST00000309017 MTIF2P46199 727 aaKnown RBP12.5□□□□□ -0.41
PTPN7-201ENST00000309017 DNA2P51530 1060 aa12.5□□□□□ -0.41
PTPN7-201ENST00000309017 CYP27A1Q02318 531 aa12.5□□□□□ -0.41
PTPN7-201ENST00000309017 ALX1Q15699 326 aa12.5□□□□□ -0.41
PTPN7-201ENST00000309017 ERLIN2O94905 339 aa12.5□□□□□ -0.41
PTPN7-201ENST00000309017 GNAT2P19087 354 aa12.5□□□□□ -0.41
PTPN7-201ENST00000309017 MNAT1P51948 309 aa12.5□□□□□ -0.41
PTPN7-201ENST00000309017 TRAPPC11Q7Z392 1133 aa12.5□□□□□ -0.41
PTPN7-201ENST00000309017 ARFGEF2Q9Y6D5 1785 aa12.49□□□□□ -0.41
PTPN7-201ENST00000309017 PSMA7O14818 248 aa12.49□□□□□ -0.41
PTPN7-201ENST00000309017 SYF2O95926 243 aaKnown RBP12.49□□□□□ -0.41
PTPN7-201ENST00000309017 PRCPP42785 496 aa12.49□□□□□ -0.41
PTPN7-201ENST00000309017 AMPD2Q01433 879 aa12.49□□□□□ -0.41
PTPN7-201ENST00000309017 TBC1D8BQ0IIM8 1120 aa12.49□□□□□ -0.41
PTPN7-201ENST00000309017 TADA2BQ86TJ2 420 aa12.49□□□□□ -0.41
PTPN7-201ENST00000309017 STAG1Q8WVM7 1258 aa12.49□□□□□ -0.41
PTPN7-201ENST00000309017 VIPAS39Q9H9C1 493 aa12.49□□□□□ -0.41
PTPN7-201ENST00000309017 XDHP47989 1333 aa12.49□□□□□ -0.41
PTPN7-201ENST00000309017 WNT7AO00755 349 aa12.49□□□□□ -0.41
PTPN7-201ENST00000309017 RPS6KA5O75582 802 aa12.49□□□□□ -0.41
PTPN7-201ENST00000309017 CSF1RP07333 972 aa12.49□□□□□ -0.41
PTPN7-201ENST00000309017 HLFQ16534 295 aa12.49□□□□□ -0.41
PTPN7-201ENST00000309017 ZNF658Q5TYW1 1059 aaPredicted RBP12.49□□□□□ -0.41
PTPN7-201ENST00000309017 RPGRIP1Q96KN7 1286 aa12.49□□□□□ -0.41
PTPN7-201ENST00000309017 CCDC42Q96M95 316 aa12.49□□□□□ -0.41
PTPN7-201ENST00000309017 SLIT3O75094 1523 aa12.49□□□□□ -0.41
PTPN7-201ENST00000309017 BAZ2BQ9UIF8 2168 aaKnown RBP12.49□□□□□ -0.41
PTPN7-201ENST00000309017 NWD2Q9ULI1 1742 aa12.49□□□□□ -0.41
PTPN7-201ENST00000309017 B4DLN1 442 aa12.49□□□□□ -0.41
PTPN7-201ENST00000309017 H7C1D1 291 aa12.49□□□□□ -0.41
PTPN7-201ENST00000309017 GNGT1P63211 74 aa12.49□□□□□ -0.41
PTPN7-201ENST00000309017 MSL3Q8N5Y2 521 aaKnown RBP12.49□□□□□ -0.41
PTPN7-201ENST00000309017 MB21D1Q8N884 522 aa12.49□□□□□ -0.41
PTPN7-201ENST00000309017 CCDC47Q96A33 483 aaKnown RBP12.49□□□□□ -0.41
PTPN7-201ENST00000309017 PYM1Q9BRP8 204 aaKnown RBP12.49□□□□□ -0.41
PTPN7-201ENST00000309017 TACC3Q9Y6A5 838 aa12.49□□□□□ -0.41
PTPN7-201ENST00000309017 A0A087WUV0 522 aaPredicted RBP12.48□□□□□ -0.41
PTPN7-201ENST00000309017 TCRBV5S4A2TA0A5A2 114 aa12.48□□□□□ -0.41
PTPN7-201ENST00000309017 KIAA0754O94854 1291 aa12.48□□□□□ -0.41
PTPN7-201ENST00000309017 UBA7P41226 1012 aa12.48□□□□□ -0.41
PTPN7-201ENST00000309017 SECISBP2LQ93073 1101 aaKnown RBP12.48□□□□□ -0.41
PTPN7-201ENST00000309017 CAPS2Q9BXY5 557 aa12.48□□□□□ -0.41
PTPN7-201ENST00000309017 KAT14Q9H8E8 782 aa12.48□□□□□ -0.41
PTPN7-201ENST00000309017 ERVV-2B6SEH9 535 aa12.48□□□□□ -0.41
PTPN7-201ENST00000309017 USO1O60763 962 aaKnown RBP12.48□□□□□ -0.41
PTPN7-201ENST00000309017 BCAMP50895 628 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms