RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ZNF792Q3KQV3 632 aa6.4□□□□□ -1.38
CKS1B-201ENST00000308987 C16orf46Q6P387 395 aa6.4□□□□□ -1.38
CKS1B-201ENST00000308987 DNAJC5GQ8N7S2 189 aa6.4□□□□□ -1.38
CKS1B-201ENST00000308987 GPR152Q8TDT2 470 aa6.4□□□□□ -1.38
CKS1B-201ENST00000308987 LRRC4CQ9HCJ2 640 aa6.4□□□□□ -1.38
CKS1B-201ENST00000308987 NUDCQ9Y266 331 aa6.4□□□□□ -1.38
CKS1B-201ENST00000308987 KDRP35968 1356 aa6.4□□□□□ -1.39
CKS1B-201ENST00000308987 NSD3Q9BZ95 1437 aa6.4□□□□□ -1.39
CKS1B-201ENST00000308987 SCN11AQ9UI33 1791 aa6.39□□□□□ -1.39
CKS1B-201ENST00000308987 SOX1O00570 391 aaPredicted RBP6.39□□□□□ -1.39
CKS1B-201ENST00000308987 TNFRSF10BO14763 440 aa6.39□□□□□ -1.39
CKS1B-201ENST00000308987 TRPA1O75762 1119 aa6.39□□□□□ -1.39
CKS1B-201ENST00000308987 ZAP70P43403 619 aa6.39□□□□□ -1.39
CKS1B-201ENST00000308987 NAA30Q147X3 362 aaPredicted RBP6.39□□□□□ -1.39
CKS1B-201ENST00000308987 PLCL1Q15111 1095 aa6.39□□□□□ -1.39
CKS1B-201ENST00000308987 RALBP1Q15311 655 aa6.39□□□□□ -1.39
CKS1B-201ENST00000308987 TMEM132AQ24JP5 1023 aa6.39□□□□□ -1.39
CKS1B-201ENST00000308987 CCDC184Q52MB2 194 aa6.39□□□□□ -1.39
CKS1B-201ENST00000308987 LCE5AQ5TCM9 118 aa6.39□□□□□ -1.39
CKS1B-201ENST00000308987 DUSP27Q5VZP5 1158 aa6.39□□□□□ -1.39
CKS1B-201ENST00000308987 KSR1Q8IVT5 923 aa6.39□□□□□ -1.39
CKS1B-201ENST00000308987 FAM9BQ8IZU0 186 aa6.39□□□□□ -1.39
CKS1B-201ENST00000308987 C2CD4AQ8NCU7 369 aaPredicted RBP6.39□□□□□ -1.39
CKS1B-201ENST00000308987 FLAD1Q8NFF5 587 aa6.39□□□□□ -1.39
CKS1B-201ENST00000308987 BCL7CQ8WUZ0 217 aaPredicted RBP6.39□□□□□ -1.39
CKS1B-201ENST00000308987 EZH1Q92800 747 aaPredicted RBP6.39□□□□□ -1.39
CKS1B-201ENST00000308987 KANSL3Q9P2N6 904 aa6.39□□□□□ -1.39
CKS1B-201ENST00000308987 SALL4Q9UJQ4 1053 aa6.39□□□□□ -1.39
CKS1B-201ENST00000308987 SOX13Q9UN79 622 aa6.39□□□□□ -1.39
CKS1B-201ENST00000308987 KIF24Q5T7B8 1368 aa6.39□□□□□ -1.39
CKS1B-201ENST00000308987 LOC100289279A0A1B0GTE1 492 aa6.38□□□□□ -1.39
CKS1B-201ENST00000308987 PDE2AO00408 941 aaPredicted RBP6.38□□□□□ -1.39
CKS1B-201ENST00000308987 ZNF865P0CJ78 1059 aaPredicted RBP6.38□□□□□ -1.39
CKS1B-201ENST00000308987 KCNA3P22001 575 aa6.38□□□□□ -1.39
CKS1B-201ENST00000308987 SSFA2P28290 1259 aa6.38□□□□□ -1.39
CKS1B-201ENST00000308987 ZNF574Q6ZN55 896 aaPredicted RBP6.38□□□□□ -1.39
CKS1B-201ENST00000308987 SPRED2Q7Z698 418 aa6.38□□□□□ -1.39
CKS1B-201ENST00000308987 SMARCC1Q92922 1105 aaPredicted RBP6.38□□□□□ -1.39
CKS1B-201ENST00000308987 HHIPQ96QV1 700 aa6.38□□□□□ -1.39
CKS1B-201ENST00000308987 USP26Q9BXU7 913 aa6.38□□□□□ -1.39
CKS1B-201ENST00000308987 ELP3Q9H9T3 547 aa6.38□□□□□ -1.39
CKS1B-201ENST00000308987 DZANK1Q9NVP4 752 aa6.38□□□□□ -1.39
CKS1B-201ENST00000308987 CNTN3Q9P232 1028 aa6.38□□□□□ -1.39
CKS1B-201ENST00000308987 SLC5A6Q9Y289 635 aa6.38□□□□□ -1.39
CKS1B-201ENST00000308987 C10orf71Q711Q0 1435 aa6.38□□□□□ -1.39
CKS1B-201ENST00000308987 DLEC1Q9Y238 1755 aa6.37□□□□□ -1.39
CKS1B-201ENST00000308987 KDM6AO15550 1401 aaPredicted RBP6.37□□□□□ -1.39
CKS1B-201ENST00000308987 A0A0G2JLW4 131 aa6.37□□□□□ -1.39
CKS1B-201ENST00000308987 MMP10P09238 476 aa6.37□□□□□ -1.39
CKS1B-201ENST00000308987 PHKG2P15735 406 aa6.37□□□□□ -1.39
CKS1B-201ENST00000308987 EXOSC6Q5RKV6 272 aaKnown RBP6.37□□□□□ -1.39
CKS1B-201ENST00000308987 ERICH6Q7L0X2 663 aa6.37□□□□□ -1.39
CKS1B-201ENST00000308987 WFDC3Q8IUB2 231 aa6.37□□□□□ -1.39
CKS1B-201ENST00000308987 PNISRQ8TF01 805 aaKnown RBP6.37□□□□□ -1.39
CKS1B-201ENST00000308987 NMRK2Q9NPI5 230 aa6.37□□□□□ -1.39
CKS1B-201ENST00000308987 TMEM63CQ9P1W3 806 aa6.37□□□□□ -1.39
CKS1B-201ENST00000308987 POLKQ9UBT6 870 aa6.37□□□□□ -1.39
CKS1B-201ENST00000308987 DICER1Q9UPY3 1922 aaKnown RBP6.37□□□□□ -1.39
CKS1B-201ENST00000308987 MYBBP1AQ9BQG0 1328 aaKnown RBP6.36□□□□□ -1.39
CKS1B-201ENST00000308987 GYS1P13807 737 aa6.36□□□□□ -1.39
CKS1B-201ENST00000308987 DPEP1P16444 411 aa6.36□□□□□ -1.39
CKS1B-201ENST00000308987 TMF1P82094 1093 aa6.36□□□□□ -1.39
CKS1B-201ENST00000308987 HTRA3P83110 453 aa6.36□□□□□ -1.39
CKS1B-201ENST00000308987 SOX4Q06945 474 aaPredicted RBP6.36□□□□□ -1.39
CKS1B-201ENST00000308987 EIF4A2Q14240 407 aaKnown RBP6.36□□□□□ -1.39
CKS1B-201ENST00000308987 KRTAP19-4Q3LI73 84 aa6.36□□□□□ -1.39
CKS1B-201ENST00000308987 ZNF765Q7L2R6 523 aa6.36□□□□□ -1.39
CKS1B-201ENST00000308987 FAM168AQ92567 244 aa6.36□□□□□ -1.39
CKS1B-201ENST00000308987 YIPF2Q9BWQ6 316 aa6.36□□□□□ -1.39
CKS1B-201ENST00000308987 TMOD3Q9NYL9 352 aa6.36□□□□□ -1.39
CKS1B-201ENST00000308987 CACNA1SQ13698 1873 aa6.36□□□□□ -1.39
CKS1B-201ENST00000308987 ANKRD31Q8N7Z5 1873 aa6.36□□□□□ -1.39
CKS1B-201ENST00000308987 NRXN2Q9P2S2 1712 aa6.36□□□□□ -1.39
CKS1B-201ENST00000308987 TNRC6CQ9HCJ0 1690 aaKnown RBP6.36□□□□□ -1.39
CKS1B-201ENST00000308987 ZBTB39O15060 712 aa6.35□□□□□ -1.39
CKS1B-201ENST00000308987 PPM1GO15355 546 aaPredicted RBP6.35□□□□□ -1.39
CKS1B-201ENST00000308987 CYP27A1Q02318 531 aa6.35□□□□□ -1.39
CKS1B-201ENST00000308987 IKBKEQ14164 716 aa6.35□□□□□ -1.39
CKS1B-201ENST00000308987 CAPN12Q6ZSI9 719 aa6.35□□□□□ -1.39
CKS1B-201ENST00000308987 VN1R5Q7Z5H4 357 aa6.35□□□□□ -1.39
CKS1B-201ENST00000308987 ATG4DQ86TL0 474 aaPredicted RBP6.35□□□□□ -1.39
CKS1B-201ENST00000308987 IFNL2Q8IZJ0 200 aa6.35□□□□□ -1.39
CKS1B-201ENST00000308987 TMEM40Q8WWA1 233 aa6.35□□□□□ -1.39
CKS1B-201ENST00000308987 KRTAP17-1Q9BYP8 105 aa6.35□□□□□ -1.39
CKS1B-201ENST00000308987 SPG7Q9UQ90 795 aa6.35□□□□□ -1.39
CKS1B-201ENST00000308987 KCPQ6ZWJ8 1503 aa6.35□□□□□ -1.39
CKS1B-201ENST00000308987 TIAM2Q8IVF5 1701 aa6.34□□□□□ -1.39
CKS1B-201ENST00000308987 NFICP08651 508 aa6.34□□□□□ -1.39
CKS1B-201ENST00000308987 PRELPP51888 382 aa6.34□□□□□ -1.39
CKS1B-201ENST00000308987 TGFB2P61812 414 aa6.34□□□□□ -1.39
CKS1B-201ENST00000308987 IRX6P78412 446 aaPredicted RBP6.34□□□□□ -1.39
CKS1B-201ENST00000308987 DDR1Q08345 913 aa6.34□□□□□ -1.39
CKS1B-201ENST00000308987 BNIP3Q12983 259 aa6.34□□□□□ -1.39
CKS1B-201ENST00000308987 PDE12Q6L8Q7 609 aaKnown RBP6.34□□□□□ -1.39
CKS1B-201ENST00000308987 ARHGAP27Q6ZUM4 889 aa6.34□□□□□ -1.39
CKS1B-201ENST00000308987 AEBP1Q8IUX7 1158 aa6.34□□□□□ -1.39
CKS1B-201ENST00000308987 C1orf127Q8N9H9 656 aa6.34□□□□□ -1.39
CKS1B-201ENST00000308987 GLIS3Q8NEA6 775 aa6.34□□□□□ -1.39
CKS1B-201ENST00000308987 TTC16Q8NEE8 873 aa6.34□□□□□ -1.39
CKS1B-201ENST00000308987 SLC38A3Q99624 504 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms