RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 NTRK3Q16288 839 aa12.04□□□□□ -0.48
MUC4-201ENST00000308466 CNGA4Q8IV77 575 aa12.04□□□□□ -0.48
MUC4-201ENST00000308466 VSTM4Q8IW00 320 aa12.04□□□□□ -0.48
MUC4-201ENST00000308466 CCDC102AQ96A19 550 aa12.04□□□□□ -0.48
MUC4-201ENST00000308466 FAM212AQ96EL1 285 aa12.04□□□□□ -0.48
MUC4-201ENST00000308466 LUC7L2Q9Y383 392 aaKnown RBP12.04□□□□□ -0.48
MUC4-201ENST00000308466 PNPLA7Q6ZV29 1317 aa12.03□□□□□ -0.48
MUC4-201ENST00000308466 STK36Q9NRP7 1315 aa12.03□□□□□ -0.48
MUC4-201ENST00000308466 TCRBV5S4A2TA0A5A2 114 aa12.03□□□□□ -0.48
MUC4-201ENST00000308466 ERLIN1O75477 346 aa12.03□□□□□ -0.48
MUC4-201ENST00000308466 ZNF76P36508 570 aa12.03□□□□□ -0.48
MUC4-201ENST00000308466 MCM6Q14566 821 aa12.03□□□□□ -0.48
MUC4-201ENST00000308466 ADGRA1Q86SQ6 560 aa12.03□□□□□ -0.48
MUC4-201ENST00000308466 TRIML1Q8N9V2 468 aa12.03□□□□□ -0.48
MUC4-201ENST00000308466 SLF1Q9BQI6 1058 aa12.03□□□□□ -0.48
MUC4-201ENST00000308466 OSBPL5Q9H0X9 879 aaPredicted RBP12.03□□□□□ -0.48
MUC4-201ENST00000308466 MMRN2Q9H8L6 949 aa12.03□□□□□ -0.48
MUC4-201ENST00000308466 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.03□□□□□ -0.48
MUC4-201ENST00000308466 TUBB4AP04350 444 aa12.03□□□□□ -0.48
MUC4-201ENST00000308466 MNAT1P51948 309 aa12.03□□□□□ -0.48
MUC4-201ENST00000308466 PTPAQ15257 358 aa12.03□□□□□ -0.48
MUC4-201ENST00000308466 TDRD12Q587J7 1177 aaKnown RBP12.03□□□□□ -0.48
MUC4-201ENST00000308466 ENOX1Q8TC92 643 aaKnown RBP12.03□□□□□ -0.48
MUC4-201ENST00000308466 PAGE5Q96GU1 130 aa12.03□□□□□ -0.48
MUC4-201ENST00000308466 BRIP1Q9BX63 1249 aa12.03□□□□□ -0.48
MUC4-201ENST00000308466 BIN2Q9UBW5 565 aaPredicted RBP12.03□□□□□ -0.48
MUC4-201ENST00000308466 FBXO2Q9UK22 296 aaPredicted RBP12.03□□□□□ -0.48
MUC4-201ENST00000308466 CHD2O14647 1828 aaKnown RBP12.03□□□□□ -0.48
MUC4-201ENST00000308466 SMCO2A6NFE2 343 aa12.03□□□□□ -0.48
MUC4-201ENST00000308466 RHOXF2BP0C7M4 288 aa12.03□□□□□ -0.48
MUC4-201ENST00000308466 PPP2R3AQ06190 1150 aa12.03□□□□□ -0.48
MUC4-201ENST00000308466 TBC1D8BQ0IIM8 1120 aa12.03□□□□□ -0.48
MUC4-201ENST00000308466 TTC31Q49AM3 519 aaPredicted RBP12.03□□□□□ -0.48
MUC4-201ENST00000308466 TMTC3Q6ZXV5 915 aa12.03□□□□□ -0.48
MUC4-201ENST00000308466 DYMQ7RTS9 669 aa12.03□□□□□ -0.48
MUC4-201ENST00000308466 RHOXF2Q9BQY4 288 aa12.03□□□□□ -0.48
MUC4-201ENST00000308466 SRRTQ9BXP5 876 aaKnown RBP12.03□□□□□ -0.48
MUC4-201ENST00000308466 ARFGAP3Q9NP61 516 aa12.03□□□□□ -0.48
MUC4-201ENST00000308466 MED1Q15648 1581 aaPredicted RBP12.02□□□□□ -0.48
MUC4-201ENST00000308466 TRIM66O15016 1216 aa12.02□□□□□ -0.48
MUC4-201ENST00000308466 BTDP43251 543 aa12.02□□□□□ -0.48
MUC4-201ENST00000308466 SETQ01105 290 aaPredicted RBP12.02□□□□□ -0.48
MUC4-201ENST00000308466 CSGALNACT2Q8N6G5 542 aa12.02□□□□□ -0.48
MUC4-201ENST00000308466 FAM217BQ9NTX9 383 aaPredicted RBP12.02□□□□□ -0.48
MUC4-201ENST00000308466 FEZ2Q9UHY8 353 aaPredicted RBP12.02□□□□□ -0.48
MUC4-201ENST00000308466 CTAGE9A4FU28 777 aa12.02□□□□□ -0.49
MUC4-201ENST00000308466 PLCG2P16885 1265 aa12.02□□□□□ -0.49
MUC4-201ENST00000308466 CASP14P31944 242 aa12.02□□□□□ -0.49
MUC4-201ENST00000308466 E4F1Q66K89 784 aaPredicted RBP12.02□□□□□ -0.49
MUC4-201ENST00000308466 C3orf67Q6ZVT6 689 aa12.02□□□□□ -0.49
MUC4-201ENST00000308466 TRMT1LQ7Z2T5 733 aaKnown RBP12.02□□□□□ -0.49
MUC4-201ENST00000308466 CAPN2P17655 700 aa12.02□□□□□ -0.49
MUC4-201ENST00000308466 TECP42680 631 aa12.02□□□□□ -0.49
MUC4-201ENST00000308466 FMR1Q06787 632 aaKnown RBP eCLIP12.02□□□□□ -0.49
MUC4-201ENST00000308466 NONOQ15233 471 aaKnown RBP eCLIP12.02□□□□□ -0.49
MUC4-201ENST00000308466 CCDC181Q5TID7 509 aa12.02□□□□□ -0.49
MUC4-201ENST00000308466 USP17L2Q6R6M4 530 aa12.02□□□□□ -0.49
MUC4-201ENST00000308466 SRBD1Q8N5C6 995 aaKnown RBP12.02□□□□□ -0.49
MUC4-201ENST00000308466 NSUN4Q96CB9 384 aaKnown RBP12.02□□□□□ -0.49
MUC4-201ENST00000308466 GSDMAQ96QA5 445 aa12.02□□□□□ -0.49
MUC4-201ENST00000308466 JADE2Q9NQC1 790 aa12.02□□□□□ -0.49
MUC4-201ENST00000308466 KCNG1Q9UIX4 513 aa12.02□□□□□ -0.49
MUC4-201ENST00000308466 THRAP3Q9Y2W1 955 aaKnown RBP12.02□□□□□ -0.49
MUC4-201ENST00000308466 FRMPD2Q68DX3 1309 aaPredicted RBP12.02□□□□□ -0.49
MUC4-201ENST00000308466 AKR1B10O60218 316 aa12.01□□□□□ -0.49
MUC4-201ENST00000308466 HLA-DOAP06340 250 aa12.01□□□□□ -0.49
MUC4-201ENST00000308466 CCDC40Q4G0X9 1142 aa12.01□□□□□ -0.49
MUC4-201ENST00000308466 LINC00116Q8NCU8 138 aa12.01□□□□□ -0.49
MUC4-201ENST00000308466 NKX2-3Q8TAU0 364 aa12.01□□□□□ -0.49
MUC4-201ENST00000308466 SH3RF3Q8TEJ3 882 aaPredicted RBP12.01□□□□□ -0.49
MUC4-201ENST00000308466 BPIFA3Q9BQP9 254 aa12.01□□□□□ -0.49
MUC4-201ENST00000308466 BCCIPQ9P287 314 aaKnown RBP eCLIP12.01□□□□□ -0.49
MUC4-201ENST00000308466 SEMA3EO15041 775 aa12.01□□□□□ -0.49
MUC4-201ENST00000308466 TEX33O43247 280 aa12.01□□□□□ -0.49
MUC4-201ENST00000308466 ERCC5P28715 1186 aaPredicted RBP12.01□□□□□ -0.49
MUC4-201ENST00000308466 MATR3P43243 847 aaKnown RBP eCLIP12.01□□□□□ -0.49
MUC4-201ENST00000308466 TOB1P50616 345 aaPredicted RBP12.01□□□□□ -0.49
MUC4-201ENST00000308466 RBL2Q08999 1139 aa12.01□□□□□ -0.49
MUC4-201ENST00000308466 MORC3Q14149 939 aa12.01□□□□□ -0.49
MUC4-201ENST00000308466 CABP7Q86V35 215 aa12.01□□□□□ -0.49
MUC4-201ENST00000308466 LRRC47Q8N1G4 583 aaKnown RBP12.01□□□□□ -0.49
MUC4-201ENST00000308466 TUBE1Q9UJT0 475 aa12.01□□□□□ -0.49
MUC4-201ENST00000308466 STX10O60499 249 aa12.01□□□□□ -0.49
MUC4-201ENST00000308466 RPS6KA4O75676 772 aa12.01□□□□□ -0.49
MUC4-201ENST00000308466 PCP11498 1178 aaKnown RBP12.01□□□□□ -0.49
MUC4-201ENST00000308466 KRT79Q5XKE5 535 aa12.01□□□□□ -0.49
MUC4-201ENST00000308466 ARHGEF1Q92888 912 aaKnown RBP12.01□□□□□ -0.49
MUC4-201ENST00000308466 CAPZA3Q96KX2 299 aa12.01□□□□□ -0.49
MUC4-201ENST00000308466 NARFQ9UHQ1 456 aa12.01□□□□□ -0.49
MUC4-201ENST00000308466 ZBTB12Q9Y330 459 aaPredicted RBP12.01□□□□□ -0.49
MUC4-201ENST00000308466 SPATA31A1Q5TZJ5 1347 aa12.01□□□□□ -0.49
MUC4-201ENST00000308466 JCADQ9P266 1359 aa12.01□□□□□ -0.49
MUC4-201ENST00000308466 SOWAHDA6NJG2 315 aa12□□□□□ -0.49
MUC4-201ENST00000308466 ANKRD65E5RJM6 399 aa12□□□□□ -0.49
MUC4-201ENST00000308466 RPN1P04843 607 aaKnown RBP12□□□□□ -0.49
MUC4-201ENST00000308466 TCP10Q12799 353 aa12□□□□□ -0.49
MUC4-201ENST00000308466 CT47A1Q5JQC4 288 aaPredicted RBP12□□□□□ -0.49
MUC4-201ENST00000308466 FOXP4Q8IVH2 680 aaPredicted RBP12□□□□□ -0.49
MUC4-201ENST00000308466 STAG2Q8N3U4 1231 aa12□□□□□ -0.49
MUC4-201ENST00000308466 FBXL16Q8N461 479 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms