RNA–Protein interactions for RNA: ENST00000307972.8

FOXP4-201, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 3,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-201ENST00000307972 HAUS4Q9H6D7 363 aa13.19□□□□□ -0.3
FOXP4-201ENST00000307972 RWDD2AQ9UIY3 292 aa13.19□□□□□ -0.3
FOXP4-201ENST00000307972 KRT86O43790 486 aa13.18□□□□□ -0.3
FOXP4-201ENST00000307972 PLEKHA8P1O95397 391 aa13.18□□□□□ -0.3
FOXP4-201ENST00000307972 BCAMP50895 628 aa13.18□□□□□ -0.3
FOXP4-201ENST00000307972 HINFPQ9BQA5 517 aa13.18□□□□□ -0.3
FOXP4-201ENST00000307972 GNL3LQ9NVN8 582 aaKnown RBP13.18□□□□□ -0.3
FOXP4-201ENST00000307972 LIMA1Q9UHB6 759 aaKnown RBP13.18□□□□□ -0.3
FOXP4-201ENST00000307972 CKAP4Q07065 602 aaKnown RBP13.18□□□□□ -0.3
FOXP4-201ENST00000307972 TTC31Q49AM3 519 aaPredicted RBP13.18□□□□□ -0.3
FOXP4-201ENST00000307972 GDAQ9Y2T3 454 aa13.18□□□□□ -0.3
FOXP4-201ENST00000307972 MROH5Q6ZUA9 1318 aa13.18□□□□□ -0.3
FOXP4-201ENST00000307972 ATRNO75882 1429 aa13.18□□□□□ -0.3
FOXP4-201ENST00000307972 CAMTA1Q9Y6Y1 1673 aa13.18□□□□□ -0.3
FOXP4-201ENST00000307972 CDHR2Q9BYE9 1310 aa13.18□□□□□ -0.3
FOXP4-201ENST00000307972 RNF225M0QZC1 329 aaPredicted RBP13.18□□□□□ -0.3
FOXP4-201ENST00000307972 GTPBP6O43824 516 aaPredicted RBP13.18□□□□□ -0.3
FOXP4-201ENST00000307972 KRT83P78385 493 aa13.18□□□□□ -0.3
FOXP4-201ENST00000307972 PPP2R5BQ15173 497 aa13.18□□□□□ -0.3
FOXP4-201ENST00000307972 PYM1Q9BRP8 204 aaKnown RBP13.18□□□□□ -0.3
FOXP4-201ENST00000307972 TFR2Q9UP52 801 aa13.18□□□□□ -0.3
FOXP4-201ENST00000307972 CYLC1P35663 651 aaPredicted RBP13.17□□□□□ -0.3
FOXP4-201ENST00000307972 ARHGAP25P42331 645 aa13.17□□□□□ -0.3
FOXP4-201ENST00000307972 SH3RF1Q7Z6J0 888 aa13.17□□□□□ -0.3
FOXP4-201ENST00000307972 VGLL2Q8N8G2 317 aa13.17□□□□□ -0.3
FOXP4-201ENST00000307972 EEF2KMTQ96G04 330 aa13.17□□□□□ -0.3
FOXP4-201ENST00000307972 TTC26A0AVF1 554 aa13.17□□□□□ -0.3
FOXP4-201ENST00000307972 RPN1P04843 607 aaKnown RBP13.17□□□□□ -0.3
FOXP4-201ENST00000307972 EHBP1Q8NDI1 1231 aa13.17□□□□□ -0.3
FOXP4-201ENST00000307972 JAKMIP2Q96AA8 810 aa13.17□□□□□ -0.3
FOXP4-201ENST00000307972 ZSCAN10Q96SZ4 725 aaPredicted RBP13.17□□□□□ -0.3
FOXP4-201ENST00000307972 PLIN2Q99541 437 aa13.17□□□□□ -0.3
FOXP4-201ENST00000307972 XDHP47989 1333 aa13.17□□□□□ -0.3
FOXP4-201ENST00000307972 WDR17Q8IZU2 1322 aa13.17□□□□□ -0.3
FOXP4-201ENST00000307972 MAGEB6P1A0A0J9YX57 407 aa13.17□□□□□ -0.3
FOXP4-201ENST00000307972 MACROD2A1Z1Q3 448 aa13.17□□□□□ -0.3
FOXP4-201ENST00000307972 PARP1P09874 1014 aaKnown RBP13.17□□□□□ -0.3
FOXP4-201ENST00000307972 PHF20Q9BVI0 1012 aa13.17□□□□□ -0.3
FOXP4-201ENST00000307972 TRIM49BA6NDI0 452 aa13.16□□□□□ -0.3
FOXP4-201ENST00000307972 EIF3CLB5ME19 914 aaKnown RBP13.16□□□□□ -0.3
FOXP4-201ENST00000307972 ATP1A1P05023 1023 aaKnown RBP13.16□□□□□ -0.3
FOXP4-201ENST00000307972 IDEP14735 1019 aa13.16□□□□□ -0.3
FOXP4-201ENST00000307972 USP14P54578 494 aa13.16□□□□□ -0.3
FOXP4-201ENST00000307972 ZNF658Q5TYW1 1059 aaPredicted RBP13.16□□□□□ -0.3
FOXP4-201ENST00000307972 MMS19Q96T76 1030 aa13.16□□□□□ -0.3
FOXP4-201ENST00000307972 EIF3CQ99613 913 aaKnown RBP13.16□□□□□ -0.3
FOXP4-201ENST00000307972 RBM28Q9NW13 759 aaKnown RBP13.16□□□□□ -0.3
FOXP4-201ENST00000307972 MYH7P12883 1935 aa13.16□□□□□ -0.3
FOXP4-201ENST00000307972 BAZ2BQ9UIF8 2168 aaKnown RBP13.16□□□□□ -0.3
FOXP4-201ENST00000307972 WNT7AO00755 349 aa13.16□□□□□ -0.3
FOXP4-201ENST00000307972 PRPF3O43395 683 aaKnown RBP13.16□□□□□ -0.3
FOXP4-201ENST00000307972 IGHMBP2P38935 993 aaKnown RBP13.16□□□□□ -0.3
FOXP4-201ENST00000307972 IQCEQ6IPM2 695 aa13.16□□□□□ -0.3
FOXP4-201ENST00000307972 GSPT2Q8IYD1 628 aaKnown RBP13.16□□□□□ -0.3
FOXP4-201ENST00000307972 RIN2Q8WYP3 895 aaPredicted RBP13.16□□□□□ -0.3
FOXP4-201ENST00000307972 DRC1Q96MC2 740 aa13.16□□□□□ -0.3
FOXP4-201ENST00000307972 H7C1D1 291 aa13.16□□□□□ -0.3
FOXP4-201ENST00000307972 PRCPP42785 496 aa13.16□□□□□ -0.3
FOXP4-201ENST00000307972 MATR3P43243 847 aaKnown RBP eCLIP13.16□□□□□ -0.31e-6■■□□□ 14.2
FOXP4-201ENST00000307972 WDR93Q6P2C0 686 aa13.16□□□□□ -0.3
FOXP4-201ENST00000307972 ENAHQ8N8S7 591 aaPredicted RBP13.16□□□□□ -0.3
FOXP4-201ENST00000307972 IPO4Q8TEX9 1081 aaKnown RBP13.16□□□□□ -0.3
FOXP4-201ENST00000307972 RUFY1Q96T51 708 aa13.16□□□□□ -0.3
FOXP4-201ENST00000307972 MTMR7Q9Y216 660 aa13.16□□□□□ -0.3
FOXP4-201ENST00000307972 MYH8P13535 1937 aa13.16□□□□□ -0.3
FOXP4-201ENST00000307972 SOS2Q07890 1332 aaPredicted RBP13.15□□□□□ -0.3
FOXP4-201ENST00000307972 CYP2D7A0A087X1C5 515 aa13.15□□□□□ -0.3
FOXP4-201ENST00000307972 PSMA7O14818 248 aa13.15□□□□□ -0.3
FOXP4-201ENST00000307972 LRRC31Q6UY01 552 aa13.15□□□□□ -0.3
FOXP4-201ENST00000307972 RCAN1P53805 252 aa13.15□□□□□ -0.3
FOXP4-201ENST00000307972 SPA17Q15506 151 aa13.15□□□□□ -0.3
FOXP4-201ENST00000307972 DNAJC21Q5F1R6 531 aaKnown RBP13.15□□□□□ -0.3
FOXP4-201ENST00000307972 DZIP3Q86Y13 1208 aaKnown RBP13.15□□□□□ -0.3
FOXP4-201ENST00000307972 FAM76AQ8TAV0 307 aa13.15□□□□□ -0.3
FOXP4-201ENST00000307972 CCDC47Q96A33 483 aaKnown RBP13.15□□□□□ -0.3
FOXP4-201ENST00000307972 RABEP2Q9H5N1 569 aa13.15□□□□□ -0.3
FOXP4-201ENST00000307972 CALM1P0DP23 149 aa13.15□□□□□ -0.3
FOXP4-201ENST00000307972 CALM2P0DP24 149 aa13.15□□□□□ -0.3
FOXP4-201ENST00000307972 CALM3P0DP25 149 aa13.15□□□□□ -0.3
FOXP4-201ENST00000307972 UBA7P41226 1012 aa13.15□□□□□ -0.3
FOXP4-201ENST00000307972 MAGEA9P43362 315 aa13.15□□□□□ -0.3
FOXP4-201ENST00000307972 ATP2C1P98194 919 aaPredicted RBP13.15□□□□□ -0.3
FOXP4-201ENST00000307972 PKN1Q16512 942 aa13.15□□□□□ -0.3
FOXP4-201ENST00000307972 EFCC1Q9HA90 598 aa13.15□□□□□ -0.3
FOXP4-201ENST00000307972 TJP1Q07157 1748 aa13.15□□□□□ -0.31
FOXP4-201ENST00000307972 MTIF2P46199 727 aaKnown RBP13.14□□□□□ -0.31
FOXP4-201ENST00000307972 PDE4CQ08493 712 aa13.14□□□□□ -0.31
FOXP4-201ENST00000307972 KIF5AQ12840 1032 aa13.14□□□□□ -0.31
FOXP4-201ENST00000307972 MSL3Q8N5Y2 521 aaKnown RBP13.14□□□□□ -0.31
FOXP4-201ENST00000307972 MB21D1Q8N884 522 aa13.14□□□□□ -0.31
FOXP4-201ENST00000307972 PPM1EQ8WY54 764 aa13.14□□□□□ -0.31
FOXP4-201ENST00000307972 MTA3Q9BTC8 594 aa13.14□□□□□ -0.31
FOXP4-201ENST00000307972 GTF2A1P52655 376 aaPredicted RBP13.14□□□□□ -0.31
FOXP4-201ENST00000307972 AMPD2Q01433 879 aa13.14□□□□□ -0.31
FOXP4-201ENST00000307972 TBC1D8BQ0IIM8 1120 aa13.14□□□□□ -0.31
FOXP4-201ENST00000307972 CCDC96Q2M329 555 aa13.14□□□□□ -0.31
FOXP4-201ENST00000307972 TRAPPC11Q7Z392 1133 aa13.14□□□□□ -0.31
FOXP4-201ENST00000307972 RPGRIP1Q96KN7 1286 aa13.14□□□□□ -0.31
FOXP4-201ENST00000307972 DEF6Q9H4E7 631 aa13.14□□□□□ -0.31
FOXP4-201ENST00000307972 LAMB4A4D0S4 1761 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms