RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 DICER1Q9UPY3 1922 aaKnown RBP13.68□□□□□ -0.22
TRIM40-205ENST00000307859 DDNO94850 711 aaPredicted RBP13.68□□□□□ -0.22
TRIM40-205ENST00000307859 SMARCA1P28370 1054 aa13.68□□□□□ -0.22
TRIM40-205ENST00000307859 KRT2P35908 639 aa13.68□□□□□ -0.22
TRIM40-205ENST00000307859 TOB1P50616 345 aaPredicted RBP13.68□□□□□ -0.22
TRIM40-205ENST00000307859 CACNB3P54284 484 aa13.68□□□□□ -0.22
TRIM40-205ENST00000307859 FAM160A1Q05DH4 1040 aa13.68□□□□□ -0.22
TRIM40-205ENST00000307859 NR5A1Q13285 461 aa13.68□□□□□ -0.22
TRIM40-205ENST00000307859 MAP3K11Q16584 847 aa13.68□□□□□ -0.22
TRIM40-205ENST00000307859 SLC35G1Q2M3R5 365 aa13.68□□□□□ -0.22
TRIM40-205ENST00000307859 AXDND1Q5T1B0 1012 aaPredicted RBP13.68□□□□□ -0.22
TRIM40-205ENST00000307859 CCDC73Q6ZRK6 1079 aa13.68□□□□□ -0.22
TRIM40-205ENST00000307859 SH3BP5LQ7L8J4 393 aa13.68□□□□□ -0.22
TRIM40-205ENST00000307859 NIM1KQ8IY84 436 aa13.68□□□□□ -0.22
TRIM40-205ENST00000307859 OXER1Q8TDS5 423 aa13.68□□□□□ -0.22
TRIM40-205ENST00000307859 MRPS27Q92552 414 aaKnown RBP13.68□□□□□ -0.22
TRIM40-205ENST00000307859 TNFRSF25Q93038 417 aa13.68□□□□□ -0.22
TRIM40-205ENST00000307859 CCDC17Q96LX7 622 aa13.68□□□□□ -0.22
TRIM40-205ENST00000307859 SPZ1Q9BXG8 430 aa13.68□□□□□ -0.22
TRIM40-205ENST00000307859 TNMDQ9H2S6 317 aa13.68□□□□□ -0.22
TRIM40-205ENST00000307859 DNAJC18Q9H819 358 aa13.68□□□□□ -0.22
TRIM40-205ENST00000307859 SH3GLB2Q9NR46 395 aa13.68□□□□□ -0.22
TRIM40-205ENST00000307859 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.68□□□□□ -0.22
TRIM40-205ENST00000307859 PI4KBQ9UBF8 816 aa13.68□□□□□ -0.22
TRIM40-205ENST00000307859 ZNRF3Q9ULT6 936 aa13.68□□□□□ -0.22
TRIM40-205ENST00000307859 DDTLA6NHG4 134 aaPredicted RBP13.67□□□□□ -0.22
TRIM40-205ENST00000307859 CYTH3O43739 400 aa13.67□□□□□ -0.22
TRIM40-205ENST00000307859 RAD17O75943 681 aa13.67□□□□□ -0.22
TRIM40-205ENST00000307859 SNW1Q13573 536 aaKnown RBP13.67□□□□□ -0.22
TRIM40-205ENST00000307859 METTL16Q86W50 562 aaKnown RBP13.67□□□□□ -0.22
TRIM40-205ENST00000307859 FAM177A1Q8N128 213 aaPredicted RBP13.67□□□□□ -0.22
TRIM40-205ENST00000307859 FSIP1Q8NA03 581 aa13.67□□□□□ -0.22
TRIM40-205ENST00000307859 PRMT6Q96LA8 375 aaPredicted RBP13.67□□□□□ -0.22
TRIM40-205ENST00000307859 TDRD3Q9H7E2 651 aaKnown RBP13.67□□□□□ -0.22
TRIM40-205ENST00000307859 MORC2Q9Y6X9 1032 aaPredicted RBP13.67□□□□□ -0.22
TRIM40-205ENST00000307859 SPDYE2BA6NHP3 402 aa13.66□□□□□ -0.22
TRIM40-205ENST00000307859 PARP1P09874 1014 aaKnown RBP13.66□□□□□ -0.22
TRIM40-205ENST00000307859 SPDYE6P0CI01 402 aa13.66□□□□□ -0.22
TRIM40-205ENST00000307859 TCP10Q12799 353 aa13.66□□□□□ -0.22
TRIM40-205ENST00000307859 FMR1NBQ8N0W7 255 aaPredicted RBP13.66□□□□□ -0.22
TRIM40-205ENST00000307859 AGBL3Q8NEM8 1001 aa13.66□□□□□ -0.22
TRIM40-205ENST00000307859 TAOK3Q9H2K8 898 aa13.66□□□□□ -0.22
TRIM40-205ENST00000307859 BRMS1Q9HCU9 246 aa13.66□□□□□ -0.22
TRIM40-205ENST00000307859 HDAC9Q9UKV0 1011 aa13.66□□□□□ -0.22
TRIM40-205ENST00000307859 ATAD5Q96QE3 1844 aa13.66□□□□□ -0.22
TRIM40-205ENST00000307859 THSD7BQ9C0I4 1608 aa13.65□□□□□ -0.22
TRIM40-205ENST00000307859 PDE4DIPQ5VU43 2346 aa13.65□□□□□ -0.22
TRIM40-205ENST00000307859 KLRF2D3W0D1 207 aa13.65□□□□□ -0.22
TRIM40-205ENST00000307859 TTLL1O95922 423 aa13.65□□□□□ -0.22
TRIM40-205ENST00000307859 SNHG28P0DPA3 235 aa13.65□□□□□ -0.22
TRIM40-205ENST00000307859 PDHBP11177 359 aa13.65□□□□□ -0.22
TRIM40-205ENST00000307859 CMA1P23946 247 aa13.65□□□□□ -0.22
TRIM40-205ENST00000307859 ECE1P42892 770 aa13.65□□□□□ -0.22
TRIM40-205ENST00000307859 PPP4R3BQ5MIZ7 849 aa13.65□□□□□ -0.22
TRIM40-205ENST00000307859 TATDN1Q6P1N9 297 aa13.65□□□□□ -0.22
TRIM40-205ENST00000307859 RASGRP2Q7LDG7 609 aa13.65□□□□□ -0.22
TRIM40-205ENST00000307859 FOXP4Q8IVH2 680 aaPredicted RBP13.65□□□□□ -0.22
TRIM40-205ENST00000307859 FAM237AA0A1B0GTK4 181 aa13.64□□□□□ -0.23
TRIM40-205ENST00000307859 CTAGE5O15320 804 aa13.64□□□□□ -0.23
TRIM40-205ENST00000307859 CCDC192P0DO97 292 aa13.64□□□□□ -0.23
TRIM40-205ENST00000307859 CALML3P27482 149 aa13.64□□□□□ -0.23
TRIM40-205ENST00000307859 CAMK4Q16566 473 aa13.64□□□□□ -0.23
TRIM40-205ENST00000307859 MTMR14Q8NCE2 650 aa13.64□□□□□ -0.23
TRIM40-205ENST00000307859 MCOLN1Q9GZU1 580 aa13.64□□□□□ -0.23
TRIM40-205ENST00000307859 SCN4AP35499 1836 aa13.64□□□□□ -0.23
TRIM40-205ENST00000307859 CA12O43570 354 aa13.64□□□□□ -0.23
TRIM40-205ENST00000307859 KINO60870 393 aaKnown RBP13.64□□□□□ -0.23
TRIM40-205ENST00000307859 CUTAO60888 179 aa13.64□□□□□ -0.23
TRIM40-205ENST00000307859 GOLGA8HP0CJ92 632 aa13.64□□□□□ -0.23
TRIM40-205ENST00000307859 MARCKSP29966 332 aaPredicted RBP13.64□□□□□ -0.23
TRIM40-205ENST00000307859 NLRP5P59047 1200 aa13.64□□□□□ -0.23
TRIM40-205ENST00000307859 CXCL9Q07325 125 aa13.64□□□□□ -0.23
TRIM40-205ENST00000307859 ASPRV1Q53RT3 343 aa13.64□□□□□ -0.23
TRIM40-205ENST00000307859 PRPF38BQ5VTL8 546 aaKnown RBP13.64□□□□□ -0.23
TRIM40-205ENST00000307859 USP17L2Q6R6M4 530 aa13.64□□□□□ -0.23
TRIM40-205ENST00000307859 ZSCAN29Q8IWY8 852 aaPredicted RBP13.64□□□□□ -0.23
TRIM40-205ENST00000307859 LRRC47Q8N1G4 583 aaKnown RBP13.64□□□□□ -0.23
TRIM40-205ENST00000307859 CABP5Q9NP86 173 aa13.64□□□□□ -0.23
TRIM40-205ENST00000307859 TMOD2Q9NZR1 351 aa13.64□□□□□ -0.23
TRIM40-205ENST00000307859 CEP131Q9UPN4 1083 aa13.64□□□□□ -0.23
TRIM40-205ENST00000307859 MTMR7Q9Y216 660 aa13.64□□□□□ -0.23
TRIM40-205ENST00000307859 A0A1B0GVL5 298 aa13.63□□□□□ -0.23
TRIM40-205ENST00000307859 FAM205CA6NFA0 338 aa13.63□□□□□ -0.23
TRIM40-205ENST00000307859 USP17L5A8MUK1 530 aa13.63□□□□□ -0.23
TRIM40-205ENST00000307859 SLURP2P0DP57 97 aa13.63□□□□□ -0.23
TRIM40-205ENST00000307859 NDUFA8P51970 172 aa13.63□□□□□ -0.23
TRIM40-205ENST00000307859 DLGAP5Q15398 846 aa13.63□□□□□ -0.23
TRIM40-205ENST00000307859 SPDYE2Q495Y8 402 aa13.63□□□□□ -0.23
TRIM40-205ENST00000307859 EARS2Q5JPH6 523 aaKnown RBP13.63□□□□□ -0.23
TRIM40-205ENST00000307859 FKBP1CQ5VVH2 108 aa13.63□□□□□ -0.23
TRIM40-205ENST00000307859 WWC2Q6AWC2 1192 aa13.63□□□□□ -0.23
TRIM40-205ENST00000307859 GALNT17Q6IS24 598 aa13.63□□□□□ -0.23
TRIM40-205ENST00000307859 PNMA8AQ86V59 439 aaPredicted RBP13.63□□□□□ -0.23
TRIM40-205ENST00000307859 CLEC10AQ8IUN9 316 aa13.63□□□□□ -0.23
TRIM40-205ENST00000307859 OGFOD1Q8N543 542 aa13.63□□□□□ -0.23
TRIM40-205ENST00000307859 DAGLBQ8NCG7 672 aa13.63□□□□□ -0.23
TRIM40-205ENST00000307859 CCDC148Q8NFR7 591 aa13.63□□□□□ -0.23
TRIM40-205ENST00000307859 PIBF1Q8WXW3 757 aa13.63□□□□□ -0.23
TRIM40-205ENST00000307859 GPKOWQ92917 476 aaPredicted RBP eCLIP13.63□□□□□ -0.23
TRIM40-205ENST00000307859 RIOX1Q9H6W3 641 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms