RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 WDR78Q5VTH9 848 aa9.16□□□□□ -0.94
TM4SF1-201ENST00000305366 RNF20Q5VTR2 975 aa9.16□□□□□ -0.94
TM4SF1-201ENST00000305366 UBE2Q1Q7Z7E8 422 aa9.16□□□□□ -0.94
TM4SF1-201ENST00000305366 GPRC5AQ8NFJ5 357 aa9.16□□□□□ -0.94
TM4SF1-201ENST00000305366 ZFP91Q96JP5 570 aaPredicted RBP9.16□□□□□ -0.94
TM4SF1-201ENST00000305366 FEZ1Q99689 392 aa9.16□□□□□ -0.94
TM4SF1-201ENST00000305366 TSPY26PQ9H489 355 aa9.16□□□□□ -0.94
TM4SF1-201ENST00000305366 GJD2Q9UKL4 321 aa9.16□□□□□ -0.94
TM4SF1-201ENST00000305366 SLC27A2O14975 620 aa9.15□□□□□ -0.94
TM4SF1-201ENST00000305366 ATP5JP18859 108 aa9.15□□□□□ -0.94
TM4SF1-201ENST00000305366 MCM5P33992 734 aa9.15□□□□□ -0.94
TM4SF1-201ENST00000305366 HERVK_113P62684 666 aa9.15□□□□□ -0.94
TM4SF1-201ENST00000305366 ANKRD1Q15327 319 aa9.15□□□□□ -0.94
TM4SF1-201ENST00000305366 UVSSAQ2YD98 709 aa9.15□□□□□ -0.94
TM4SF1-201ENST00000305366 SH3D19Q5HYK7 790 aa9.15□□□□□ -0.94
TM4SF1-201ENST00000305366 FAM184AQ8NB25 1140 aa9.15□□□□□ -0.94
TM4SF1-201ENST00000305366 FAM227BQ96M60 508 aa9.15□□□□□ -0.94
TM4SF1-201ENST00000305366 WDR18Q9BV38 432 aa9.15□□□□□ -0.94
TM4SF1-201ENST00000305366 HMX1Q9NP08 348 aaPredicted RBP9.15□□□□□ -0.94
TM4SF1-201ENST00000305366 RBPJLQ9UBG7 517 aa9.15□□□□□ -0.94
TM4SF1-201ENST00000305366 ZBTB21Q9ULJ3 1066 aa9.15□□□□□ -0.94
TM4SF1-201ENST00000305366 ZMYND8Q9ULU4 1186 aaPredicted RBP9.15□□□□□ -0.94
TM4SF1-201ENST00000305366 NOL7Q9UMY1 257 aaKnown RBP9.15□□□□□ -0.94
TM4SF1-201ENST00000305366 C19orf81C9J6K1 198 aa9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 LARGE1O95461 756 aa9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 HMGCRP04035 888 aa9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 SYN1P17600 705 aa9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 ST3GAL1Q11201 340 aa9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 MAP3K12Q12852 859 aa9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 CCDC183Q5T5S1 534 aa9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 NECAB2Q7Z6G3 386 aa9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 C7orf61Q8IZ16 206 aa9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 FAM177A1Q8N128 213 aaPredicted RBP9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 NUDT12Q9BQG2 462 aa9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 PAK6Q9NQU5 681 aaPredicted RBP9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 EMILIN3Q9NT22 766 aa9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 MTMR6Q9Y217 621 aa9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 A0A0D9SFI3 127 aa9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 MPHOSPH10O00566 681 aaKnown RBP9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 ZNF500O60304 480 aaPredicted RBP9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 GADD45BO75293 160 aaPredicted RBP9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 POLR3DP05423 398 aaPredicted RBP9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 MSNP26038 577 aaKnown RBP9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 GJB2P29033 226 aa9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 ME3Q16798 604 aa9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 CERKLQ49MI3 558 aaPredicted RBP9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 USP17L2Q6R6M4 530 aa9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 CERS3Q8IU89 383 aa9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 CCDC83Q8IWF9 413 aa9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 ACER1Q8TDN7 264 aa9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 TRIB2Q92519 343 aa9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 ZNF512BQ96KM6 892 aaPredicted RBP9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 DNAJC2Q99543 621 aaKnown RBP9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 FSD1Q9BTV5 496 aa9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 PORCNQ9H237 461 aa9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 BOLA2Q9H3K6 86 aa9.14□□□□□ -0.95
TM4SF1-201ENST00000305366 RPTORQ8N122 1335 aa9.13□□□□□ -0.95
TM4SF1-201ENST00000305366 PRKAR2AP13861 404 aaKnown RBP9.13□□□□□ -0.95
TM4SF1-201ENST00000305366 CPA1P15085 419 aa9.13□□□□□ -0.95
TM4SF1-201ENST00000305366 HOXA7P31268 230 aaPredicted RBP9.13□□□□□ -0.95
TM4SF1-201ENST00000305366 PLCD1P51178 756 aa9.13□□□□□ -0.95
TM4SF1-201ENST00000305366 KRT32Q14532 448 aa9.13□□□□□ -0.95
TM4SF1-201ENST00000305366 CCL14Q16627 93 aa9.13□□□□□ -0.95
TM4SF1-201ENST00000305366 ABCB5Q2M3G0 1257 aa9.13□□□□□ -0.95
TM4SF1-201ENST00000305366 BLOC1S2Q6QNY1 142 aa9.13□□□□□ -0.95
TM4SF1-201ENST00000305366 CRISPLD2Q9H0B8 497 aa9.13□□□□□ -0.95
TM4SF1-201ENST00000305366 GDPD2Q9HCC8 539 aa9.13□□□□□ -0.95
TM4SF1-201ENST00000305366 MORF4L1Q9UBU8 362 aa9.13□□□□□ -0.95
TM4SF1-201ENST00000305366 CCDC39Q9UFE4 941 aa9.13□□□□□ -0.95
TM4SF1-201ENST00000305366 CNPY2Q9Y2B0 182 aa9.13□□□□□ -0.95
TM4SF1-201ENST00000305366 MAGEB6P1A0A0J9YX57 407 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 GOLIM4O00461 696 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 PDCP20941 246 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 RPS6KB1P23443 525 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 TERF1P54274 439 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 ERVK-9P63128 1117 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 ERVK-24P63145 666 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 SLFNL1Q499Z3 407 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 SLC9C2Q5TAH2 1124 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 POTEEQ6S8J3 1075 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 GPR142Q7Z601 462 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 PLEKHH3Q7Z736 793 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 TTC6Q86TZ1 520 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 EDC3Q96F86 508 aaKnown RBP9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 NBPF3Q9H094 633 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 CABP5Q9NP86 173 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 MCM9Q9NXL9 1143 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 SERPINB13Q9UIV8 391 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 TPCN1Q9ULQ1 816 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 USP17L15C9J2P7 530 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 USP17L13C9JLJ4 530 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 USP17L11C9JVI0 530 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 USP17L18D6R9N7 530 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 USP17L22D6RA61 530 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 USP17L17D6RBQ6 530 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 USP17L19D6RCP7 530 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 USP17L20D6RJB6 530 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 OFD1O75665 1012 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 CYP2D6P10635 497 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 CNGA1P29973 690 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms