RNA–Protein interactions for RNA: ENST00000301981.7

LRRC28-201, Transcript of leucine rich repeat containing 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC28, Length 5,971 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-201ENST00000301981 NAA25Q14CX7 972 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 KRT79Q5XKE5 535 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 SV2BQ7L1I2 683 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 SRGAP1Q7Z6B7 1085 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 SNX29Q8TEQ0 813 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 RRP36Q96EU6 259 aaKnown RBP8.59□□□□□ -1.03
LRRC28-201ENST00000301981 ADAM21Q9UKJ8 722 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 RTL9Q8NET4 1388 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 PDE8AO60658 829 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 HOXB7P09629 217 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 GUCY2DQ02846 1103 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 CEP85LQ5SZL2 805 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 MSL1Q68DK7 614 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 TMTC1Q8IUR5 882 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 POLR3EQ9NVU0 708 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 CRB1P82279 1406 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 USP17L3A6NCW0 530 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 USP17L4A6NCW7 530 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 SH2B2O14492 632 aaPredicted RBP8.59□□□□□ -1.03
LRRC28-201ENST00000301981 OPA1O60313 960 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 UBXN2AP68543 259 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 E2F5Q15329 346 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 USP17L1Q7RTZ2 530 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 TMC4Q7Z404 712 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 CCDC50Q8IVM0 306 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 LPIN2Q92539 896 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 KRT12Q99456 494 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 LSM14BQ9BX40 385 aaKnown RBP8.59□□□□□ -1.03
LRRC28-201ENST00000301981 MYO1AQ9UBC5 1043 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.59□□□□□ -1.03
LRRC28-201ENST00000301981 PNPLA6Q8IY17 1366 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 PSDA5PKW4 1024 aaPredicted RBP8.59□□□□□ -1.03
LRRC28-201ENST00000301981 KCNK3O14649 394 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 CC2D1AQ6P1N0 951 aaPredicted RBP8.59□□□□□ -1.03
LRRC28-201ENST00000301981 EHBP1Q8NDI1 1231 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 GJA10Q969M2 543 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 PAGE5Q96GU1 130 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 RAB34Q9BZG1 259 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 C19orf44Q9H6X5 657 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 TBX22Q9Y458 520 aa8.59□□□□□ -1.03
LRRC28-201ENST00000301981 CYP27B1O15528 508 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 TBCAO75347 108 aaKnown RBP8.58□□□□□ -1.04
LRRC28-201ENST00000301981 FDPSP14324 419 aaKnown RBP8.58□□□□□ -1.04
LRRC28-201ENST00000301981 POLR2FP61218 127 aaKnown RBP8.58□□□□□ -1.04
LRRC28-201ENST00000301981 HERC4Q5GLZ8 1057 aaPredicted RBP8.58□□□□□ -1.04
LRRC28-201ENST00000301981 VPS36Q86VN1 386 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 BANK1Q8NDB2 785 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 FAM212AQ96EL1 285 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 STK38LQ9Y2H1 464 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 CDK12Q9NYV4 1490 aaPredicted RBP8.58□□□□□ -1.04
LRRC28-201ENST00000301981 BAG3O95817 575 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 LDHBP07195 334 aaKnown RBP8.58□□□□□ -1.04
LRRC28-201ENST00000301981 PARP1P09874 1014 aaKnown RBP8.58□□□□□ -1.04
LRRC28-201ENST00000301981 USP17L8P0C7I0 530 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 NF2P35240 595 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 RFC4P35249 363 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 CASP8Q14790 479 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 SPATA1Q5VX52 437 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 DAAM2Q86T65 1068 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 METTL16Q86W50 562 aaKnown RBP8.58□□□□□ -1.04
LRRC28-201ENST00000301981 MLXIPQ9HAP2 919 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 C6orf50Q9HD87 102 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 CDC23Q9UJX2 597 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 PCDHB13Q9Y5F0 798 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 MYO3AQ8NEV4 1616 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 CLASP1Q7Z460 1538 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 SLC16A2P36021 539 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 OR8K1Q8NGG5 319 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 THOC1Q96FV9 657 aaKnown RBP8.58□□□□□ -1.04
LRRC28-201ENST00000301981 NLRP3Q96P20 1036 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 KLK7P49862 253 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 CHRNDQ07001 517 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 RASGRF1Q13972 1273 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 KRT31Q15323 416 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 DNAJC17Q9NVM6 304 aaKnown RBP8.58□□□□□ -1.04
LRRC28-201ENST00000301981 RNF17Q9BXT8 1623 aaKnown RBP8.58□□□□□ -1.04
LRRC28-201ENST00000301981 PCDH11XQ9BZA7 1347 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 PCDH11YQ9BZA8 1340 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 SMCO2A6NFE2 343 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 MEIS1O00470 390 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 HARSP12081 509 aaKnown RBP8.58□□□□□ -1.04
LRRC28-201ENST00000301981 EEF2P13639 858 aaKnown RBP8.58□□□□□ -1.04
LRRC28-201ENST00000301981 ADD2P35612 726 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 ANKRD42Q8N9B4 389 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 CHP1Q99653 195 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 AP1M1Q9BXS5 423 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 HYOU1Q9Y4L1 999 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 ATP7BP35670 1465 aa8.58□□□□□ -1.04
LRRC28-201ENST00000301981 A0A1W2PQ27 194 aa8.57□□□□□ -1.04
LRRC28-201ENST00000301981 A0A1W2PQ64 194 aa8.57□□□□□ -1.04
LRRC28-201ENST00000301981 A0A1W2PQD8 194 aa8.57□□□□□ -1.04
LRRC28-201ENST00000301981 GNPATO15228 680 aa8.57□□□□□ -1.04
LRRC28-201ENST00000301981 MMP1P03956 469 aa8.57□□□□□ -1.04
LRRC28-201ENST00000301981 IFNAR2P48551 515 aa8.57□□□□□ -1.04
LRRC28-201ENST00000301981 CYP4A11Q02928 519 aa8.57□□□□□ -1.04
LRRC28-201ENST00000301981 MICALCLQ6ZW33 695 aa8.57□□□□□ -1.04
LRRC28-201ENST00000301981 CLEC11AQ9Y240 323 aa8.57□□□□□ -1.04
LRRC28-201ENST00000301981 SH3TC1Q8TE82 1336 aa8.57□□□□□ -1.04
LRRC28-201ENST00000301981 A0A1W2PRG0 241 aa8.57□□□□□ -1.04
LRRC28-201ENST00000301981 PPP1R12BO60237 982 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms