RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 KCNV2Q8TDN2 545 aa16.12■□□□□ 0.17
CDT1-201ENST00000301019 PIK3R5Q8WYR1 880 aa16.12■□□□□ 0.17
CDT1-201ENST00000301019 MLXIPQ9HAP2 919 aa16.12■□□□□ 0.17
CDT1-201ENST00000301019 CARSP49589 748 aaKnown RBP16.12■□□□□ 0.17
CDT1-201ENST00000301019 TRIM29Q14134 588 aa16.12■□□□□ 0.17
CDT1-201ENST00000301019 MEX3CQ5U5Q3 659 aaKnown RBP16.12■□□□□ 0.17
CDT1-201ENST00000301019 TRIM68Q6AZZ1 485 aa16.12■□□□□ 0.17
CDT1-201ENST00000301019 ARMC2Q8NEN0 867 aa16.12■□□□□ 0.17
CDT1-201ENST00000301019 ENOX1Q8TC92 643 aaKnown RBP16.12■□□□□ 0.17
CDT1-201ENST00000301019 LMBR1Q8WVP7 490 aa16.12■□□□□ 0.17
CDT1-201ENST00000301019 PCDHB6Q9Y5E3 794 aa16.12■□□□□ 0.17
CDT1-201ENST00000301019 FAM205CA6NFA0 338 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 NR1D1P20393 614 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 HLFQ16534 295 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 CCDC96Q2M329 555 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 CFAP58Q5T655 872 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 RESP18Q5W5W9 173 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 CYP26C1Q6V0L0 522 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 TBC1D1Q86TI0 1168 aaPredicted RBP16.11■□□□□ 0.17
CDT1-201ENST00000301019 LBHD1Q9BQE6 289 aaPredicted RBP16.11■□□□□ 0.17
CDT1-201ENST00000301019 OSBPL7Q9BZF2 842 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 ADD3Q9UEY8 706 aaKnown RBP16.11■□□□□ 0.17
CDT1-201ENST00000301019 HPS5Q9UPZ3 1129 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 HPSEQ9Y251 543 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 CALRP27797 417 aaKnown RBP16.11■□□□□ 0.17
CDT1-201ENST00000301019 KRT31Q15323 416 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 CCDC70Q6NSX1 233 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 BRAPQ7Z569 592 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 AMOTL1Q8IY63 956 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 KRI1Q8N9T8 703 aaKnown RBP16.11■□□□□ 0.17
CDT1-201ENST00000301019 ZKSCAN3Q9BRR0 538 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 SLAIN2Q9P270 581 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 TTC26A0AVF1 554 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 TRIM49BA6NDI0 452 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 BTBD11A6QL63 1104 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 M0R2C6 588 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 OPA1O60313 960 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 GUCY1A2P33402 732 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 SMTNP53814 917 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 DDR1Q08345 913 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 PTPAQ15257 358 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 TNNI3KQ59H18 835 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 FAM133BQ5BKY9 247 aaKnown RBP16.11■□□□□ 0.17
CDT1-201ENST00000301019 MSL1Q68DK7 614 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 UBE3BQ7Z3V4 1068 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 PLIN2Q99541 437 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 MYD88Q99836 296 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 SH3GL2Q99962 352 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 BIN2Q9UBW5 565 aaPredicted RBP16.11■□□□□ 0.17
CDT1-201ENST00000301019 FPGT-TNNI3KV9GXZ4 949 aa16.11■□□□□ 0.17
CDT1-201ENST00000301019 ZMYM6O95789 1325 aa16.1■□□□□ 0.17
CDT1-201ENST00000301019 RASSF9O75901 435 aa16.1■□□□□ 0.17
CDT1-201ENST00000301019 RRAGBQ5VZM2 374 aa16.1■□□□□ 0.17
CDT1-201ENST00000301019 PI16Q6UXB8 463 aa16.1■□□□□ 0.17
CDT1-201ENST00000301019 MICALCLQ6ZW33 695 aa16.1■□□□□ 0.17
CDT1-201ENST00000301019 BRINP3Q76B58 766 aa16.1■□□□□ 0.17
CDT1-201ENST00000301019 ALDH8A1Q9H2A2 487 aaPredicted RBP16.1■□□□□ 0.17
CDT1-201ENST00000301019 SMIM23A6NLE4 172 aa16.1■□□□□ 0.17
CDT1-201ENST00000301019 HMGB1P09429 215 aaKnown RBP16.1■□□□□ 0.17
CDT1-201ENST00000301019 GUCY2DQ02846 1103 aa16.1■□□□□ 0.17
CDT1-201ENST00000301019 HLTFQ14527 1009 aaKnown RBP eCLIP16.1■□□□□ 0.17
CDT1-201ENST00000301019 CRYMQ14894 314 aa16.1■□□□□ 0.17
CDT1-201ENST00000301019 TMTC1Q8IUR5 882 aa16.1■□□□□ 0.17
CDT1-201ENST00000301019 KCNH5Q8NCM2 988 aa16.1■□□□□ 0.17
CDT1-201ENST00000301019 ANKRD18BA2A2Z9 1011 aa16.09■□□□□ 0.17
CDT1-201ENST00000301019 PPP1R37O75864 691 aa16.09■□□□□ 0.17
CDT1-201ENST00000301019 PLEKP08567 350 aaPredicted RBP16.09■□□□□ 0.17
CDT1-201ENST00000301019 METAP2P50579 478 aaKnown RBP eCLIP16.09■□□□□ 0.176e-8■■■□□ 18.6
CDT1-201ENST00000301019 TSR1Q2NL82 804 aaKnown RBP16.09■□□□□ 0.17
CDT1-201ENST00000301019 RRP12Q5JTH9 1297 aaKnown RBP16.09■□□□□ 0.17
CDT1-201ENST00000301019 MLKLQ8NB16 471 aa16.09■□□□□ 0.17
CDT1-201ENST00000301019 RASSF8Q8NHQ8 419 aa16.09■□□□□ 0.17
CDT1-201ENST00000301019 RSRC1Q96IZ7 334 aaKnown RBP16.09■□□□□ 0.17
CDT1-201ENST00000301019 CSRNP2Q9H175 543 aa16.09■□□□□ 0.17
CDT1-201ENST00000301019 TRPM3Q9HCF6 1732 aaPredicted RBP16.09■□□□□ 0.17
CDT1-201ENST00000301019 TUBGCP6Q96RT7 1819 aa16.09■□□□□ 0.17
CDT1-201ENST00000301019 BUB1O43683 1085 aa16.09■□□□□ 0.17
CDT1-201ENST00000301019 MOCS3O95396 460 aa16.09■□□□□ 0.17
CDT1-201ENST00000301019 HOXC9P31274 260 aa16.09■□□□□ 0.17
CDT1-201ENST00000301019 HERVK_113P62684 666 aa16.09■□□□□ 0.17
CDT1-201ENST00000301019 TBC1D22AQ8WUA7 517 aa16.09■□□□□ 0.17
CDT1-201ENST00000301019 CYFIP2Q96F07 1278 aa16.09■□□□□ 0.17
CDT1-201ENST00000301019 EPN3Q9H201 632 aa16.09■□□□□ 0.17
CDT1-201ENST00000301019 AGPAT5Q9NUQ2 364 aa16.09■□□□□ 0.17
CDT1-201ENST00000301019 ZNF233A6NK53 670 aa16.09■□□□□ 0.17
CDT1-201ENST00000301019 GOLGA8KD6RF30 607 aa16.09■□□□□ 0.17
CDT1-201ENST00000301019 PLCD1P51178 756 aa16.09■□□□□ 0.17
CDT1-201ENST00000301019 USP4Q13107 963 aa16.09■□□□□ 0.17
CDT1-201ENST00000301019 PTGISQ16647 500 aa16.09■□□□□ 0.17
CDT1-201ENST00000301019 NBPF14Q5TI25 921 aa16.09■□□□□ 0.17
CDT1-201ENST00000301019 ZNF274Q96GC6 653 aaPredicted RBP16.09■□□□□ 0.17
CDT1-201ENST00000301019 XAGE2Q96GT9 111 aa16.09■□□□□ 0.17
CDT1-201ENST00000301019 EPB41L5Q9HCM4 733 aa16.09■□□□□ 0.17
CDT1-201ENST00000301019 A0A087X0B3 334 aa16.08■□□□□ 0.17
CDT1-201ENST00000301019 GCP02774 474 aa16.08■□□□□ 0.17
CDT1-201ENST00000301019 NBPF9Q3BBW0 867 aa16.08■□□□□ 0.17
CDT1-201ENST00000301019 APTXQ7Z2E3 356 aaKnown RBP16.08■□□□□ 0.17
CDT1-201ENST00000301019 TMC4Q7Z404 712 aa16.08■□□□□ 0.17
CDT1-201ENST00000301019 STAG1Q8WVM7 1258 aa16.08■□□□□ 0.17
CDT1-201ENST00000301019 PRCCQ92733 491 aaPredicted RBP16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms