RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 IL17RBQ9NRM6 502 aa14.63□□□□□ -0.07
HIF3A-204ENST00000300862 COL22A1Q8NFW1 1626 aaPredicted RBP14.63□□□□□ -0.07
HIF3A-204ENST00000300862 H2AFXP16104 143 aaPredicted RBP14.63□□□□□ -0.07
HIF3A-204ENST00000300862 TYW1BQ6NUM6 668 aa14.63□□□□□ -0.07
HIF3A-204ENST00000300862 MNS1Q8NEH6 495 aa14.63□□□□□ -0.07
HIF3A-204ENST00000300862 GSDMAQ96QA5 445 aa14.63□□□□□ -0.07
HIF3A-204ENST00000300862 MRPL44Q9H9J2 332 aaKnown RBP14.63□□□□□ -0.07
HIF3A-204ENST00000300862 TMEM51Q9NW97 253 aa14.63□□□□□ -0.07
HIF3A-204ENST00000300862 NARFQ9UHQ1 456 aa14.63□□□□□ -0.07
HIF3A-204ENST00000300862 AKR1B15C9JRZ8 316 aaPredicted RBP14.62□□□□□ -0.07
HIF3A-204ENST00000300862 BMP15O95972 392 aa14.62□□□□□ -0.07
HIF3A-204ENST00000300862 USP5P45974 858 aa14.62□□□□□ -0.07
HIF3A-204ENST00000300862 E2F4Q16254 413 aa14.62□□□□□ -0.07
HIF3A-204ENST00000300862 RRAGBQ5VZM2 374 aa14.62□□□□□ -0.07
HIF3A-204ENST00000300862 RASGRP2Q7LDG7 609 aa14.62□□□□□ -0.07
HIF3A-204ENST00000300862 SH3RF3Q8TEJ3 882 aaPredicted RBP14.62□□□□□ -0.07
HIF3A-204ENST00000300862 KAT14Q9H8E8 782 aa14.62□□□□□ -0.07
HIF3A-204ENST00000300862 ANKIB1Q9P2G1 1089 aa14.62□□□□□ -0.07
HIF3A-204ENST00000300862 ARPP21Q9UBL0 812 aaPredicted RBP14.62□□□□□ -0.07
HIF3A-204ENST00000300862 A0A1B0GUL6 1792 aa14.62□□□□□ -0.07
HIF3A-204ENST00000300862 AHDC1Q5TGY3 1603 aaPredicted RBP14.62□□□□□ -0.07
HIF3A-204ENST00000300862 TM4SF1P30408 202 aa14.62□□□□□ -0.07
HIF3A-204ENST00000300862 TPTE2Q6XPS3 522 aa14.62□□□□□ -0.07
HIF3A-204ENST00000300862 FCHSD1Q86WN1 690 aa14.62□□□□□ -0.07
HIF3A-204ENST00000300862 IQUBQ8NA54 791 aa14.62□□□□□ -0.07
HIF3A-204ENST00000300862 UBXN4Q92575 508 aa14.62□□□□□ -0.07
HIF3A-204ENST00000300862 PLIN2Q99541 437 aa14.62□□□□□ -0.07
HIF3A-204ENST00000300862 NOL10Q9BSC4 688 aaKnown RBP14.62□□□□□ -0.07
HIF3A-204ENST00000300862 NYXQ9GZU5 481 aa14.62□□□□□ -0.07
HIF3A-204ENST00000300862 ANKRD2Q9GZV1 360 aa14.62□□□□□ -0.07
HIF3A-204ENST00000300862 LZTFL1Q9NQ48 299 aa14.62□□□□□ -0.07
HIF3A-204ENST00000300862 ADD3Q9UEY8 706 aaKnown RBP14.62□□□□□ -0.07
HIF3A-204ENST00000300862 SCN7AQ01118 1682 aa14.62□□□□□ -0.07
HIF3A-204ENST00000300862 PP2D1A8MPX8 630 aa14.61□□□□□ -0.07
HIF3A-204ENST00000300862 CASQ1P31415 396 aa14.61□□□□□ -0.07
HIF3A-204ENST00000300862 CLCN6P51797 869 aa14.61□□□□□ -0.07
HIF3A-204ENST00000300862 CDKAL1Q5VV42 579 aa14.61□□□□□ -0.07
HIF3A-204ENST00000300862 RAD9BQ6WBX8 426 aa14.61□□□□□ -0.07
HIF3A-204ENST00000300862 PNMA1Q8ND90 353 aa14.61□□□□□ -0.07
HIF3A-204ENST00000300862 CPVLQ9H3G5 476 aa14.61□□□□□ -0.07
HIF3A-204ENST00000300862 SAP30BPQ9UHR5 308 aaKnown RBP14.61□□□□□ -0.07
HIF3A-204ENST00000300862 NRAPQ86VF7 1730 aa14.61□□□□□ -0.07
HIF3A-204ENST00000300862 ERICH4A6NGS2 130 aa14.61□□□□□ -0.07
HIF3A-204ENST00000300862 TUBB4AP04350 444 aa14.61□□□□□ -0.07
HIF3A-204ENST00000300862 NFIXQ14938 502 aa14.61□□□□□ -0.07
HIF3A-204ENST00000300862 SLC35G1Q2M3R5 365 aa14.61□□□□□ -0.07
HIF3A-204ENST00000300862 PDXDC2PQ6P474 469 aa14.61□□□□□ -0.07
HIF3A-204ENST00000300862 PPFIBP1Q86W92 1011 aa14.61□□□□□ -0.07
HIF3A-204ENST00000300862 C8orf37Q96NL8 207 aa14.61□□□□□ -0.07
HIF3A-204ENST00000300862 GDAQ9Y2T3 454 aa14.61□□□□□ -0.07
HIF3A-204ENST00000300862 CNTNAP4Q9C0A0 1308 aa14.6□□□□□ -0.07
HIF3A-204ENST00000300862 GOLGA8HP0CJ92 632 aa14.6□□□□□ -0.07
HIF3A-204ENST00000300862 SBK1Q52WX2 424 aa14.6□□□□□ -0.07
HIF3A-204ENST00000300862 BLIDQ8IZY5 108 aa14.6□□□□□ -0.07
HIF3A-204ENST00000300862 TGFBRAP1Q8WUH2 860 aa14.6□□□□□ -0.07
HIF3A-204ENST00000300862 ARHGEF1Q92888 912 aaKnown RBP14.6□□□□□ -0.07
HIF3A-204ENST00000300862 VPS16Q9H269 839 aa14.6□□□□□ -0.07
HIF3A-204ENST00000300862 MKNK2Q9HBH9 465 aa14.6□□□□□ -0.07
HIF3A-204ENST00000300862 CCDC66A2RUB6 948 aa14.6□□□□□ -0.07
HIF3A-204ENST00000300862 RPS6KA4O75676 772 aa14.6□□□□□ -0.07
HIF3A-204ENST00000300862 CASP14P31944 242 aa14.6□□□□□ -0.07
HIF3A-204ENST00000300862 KIF5BP33176 963 aa14.6□□□□□ -0.07
HIF3A-204ENST00000300862 FXR1P51114 621 aaKnown RBP eCLIP14.6□□□□□ -0.07
HIF3A-204ENST00000300862 C12orf60Q5U649 245 aa14.6□□□□□ -0.07
HIF3A-204ENST00000300862 STX8Q9UNK0 236 aa14.6□□□□□ -0.07
HIF3A-204ENST00000300862 FHOD1Q9Y613 1164 aa14.6□□□□□ -0.07
HIF3A-204ENST00000300862 COL5A3P25940 1745 aaPredicted RBP14.6□□□□□ -0.07
HIF3A-204ENST00000300862 TADA3O75528 432 aa14.59□□□□□ -0.07
HIF3A-204ENST00000300862 LDHBP07195 334 aaKnown RBP14.59□□□□□ -0.07
HIF3A-204ENST00000300862 BBXQ8WY36 941 aaPredicted RBP14.59□□□□□ -0.07
HIF3A-204ENST00000300862 TAB2Q9NYJ8 693 aa14.59□□□□□ -0.07
HIF3A-204ENST00000300862 CASZ1Q86V15 1759 aa14.59□□□□□ -0.07
HIF3A-204ENST00000300862 PBX1P40424 430 aa14.59□□□□□ -0.07
HIF3A-204ENST00000300862 KRT31Q15323 416 aa14.59□□□□□ -0.07
HIF3A-204ENST00000300862 HEATR3Q7Z4Q2 680 aa14.59□□□□□ -0.07
HIF3A-204ENST00000300862 MAPKAPK5Q8IW41 473 aa14.59□□□□□ -0.07
HIF3A-204ENST00000300862 C4orf32Q8N8J7 132 aa14.59□□□□□ -0.07
HIF3A-204ENST00000300862 TMEM60Q9H2L4 133 aa14.59□□□□□ -0.07
HIF3A-204ENST00000300862 RNF225M0QZC1 329 aaPredicted RBP14.58□□□□□ -0.08
HIF3A-204ENST00000300862 N4BP3O15049 544 aa14.58□□□□□ -0.08
HIF3A-204ENST00000300862 CYTH3O43739 400 aa14.58□□□□□ -0.08
HIF3A-204ENST00000300862 GYPCP04921 128 aa14.58□□□□□ -0.08
HIF3A-204ENST00000300862 INF2Q27J81 1249 aa14.58□□□□□ -0.08
HIF3A-204ENST00000300862 KIFC2Q96AC6 838 aa14.58□□□□□ -0.08
HIF3A-204ENST00000300862 NGLY1Q96IV0 654 aa14.58□□□□□ -0.08
HIF3A-204ENST00000300862 ZSWIM4Q9H7M6 989 aa14.58□□□□□ -0.08
HIF3A-204ENST00000300862 MKRN1Q9UHC7 482 aaKnown RBP14.58□□□□□ -0.08
HIF3A-204ENST00000300862 CCNL1Q9UK58 526 aaPredicted RBP14.58□□□□□ -0.08
HIF3A-204ENST00000300862 RTCBQ9Y3I0 505 aaKnown RBP14.58□□□□□ -0.08
HIF3A-204ENST00000300862 TSPY3P0CV98 308 aa14.58□□□□□ -0.08
HIF3A-204ENST00000300862 TSPY8P0CW00 308 aa14.58□□□□□ -0.08
HIF3A-204ENST00000300862 STAT6P42226 847 aa14.58□□□□□ -0.08
HIF3A-204ENST00000300862 TRAPPC10P48553 1259 aa14.58□□□□□ -0.08
HIF3A-204ENST00000300862 FILIP1LQ4L180 1135 aa14.58□□□□□ -0.08
HIF3A-204ENST00000300862 WWC2Q6AWC2 1192 aa14.58□□□□□ -0.08
HIF3A-204ENST00000300862 RASSF8Q8NHQ8 419 aa14.58□□□□□ -0.08
HIF3A-204ENST00000300862 CCDC12Q8WUD4 166 aaPredicted RBP14.58□□□□□ -0.08
HIF3A-204ENST00000300862 NELFBQ8WX92 580 aa14.58□□□□□ -0.08
HIF3A-204ENST00000300862 PANX2Q96RD6 677 aa14.58□□□□□ -0.08
HIF3A-204ENST00000300862 MAD2L2Q9UI95 211 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms