RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 SPDYE2BA6NHP3 402 aa29.44■■■□□ 2.3
SDCCAG3-201ENST00000298537 GDF11O95390 407 aa29.44■■■□□ 2.3
SDCCAG3-201ENST00000298537 TTLL1O95922 423 aa29.44■■■□□ 2.3
SDCCAG3-201ENST00000298537 SPDYE6P0CI01 402 aa29.44■■■□□ 2.3
SDCCAG3-201ENST00000298537 ZNF174Q15697 407 aa29.44■■■□□ 2.3
SDCCAG3-201ENST00000298537 PIGSQ96S52 555 aa29.44■■■□□ 2.3
SDCCAG3-201ENST00000298537 DHX36Q9H2U1 1008 aaKnown RBP29.44■■■□□ 2.3
SDCCAG3-201ENST00000298537 GPCPD1Q9NPB8 672 aa29.44■■■□□ 2.3
SDCCAG3-201ENST00000298537 STXBP3O00186 592 aa29.43■■■□□ 2.3
SDCCAG3-201ENST00000298537 AP5Z1O43299 807 aa29.43■■■□□ 2.3
SDCCAG3-201ENST00000298537 CXCL9Q07325 125 aa29.43■■■□□ 2.3
SDCCAG3-201ENST00000298537 RRP1BQ14684 758 aaKnown RBP29.43■■■□□ 2.3
SDCCAG3-201ENST00000298537 RESP18Q5W5W9 173 aa29.43■■■□□ 2.3
SDCCAG3-201ENST00000298537 KRI1Q8N9T8 703 aaKnown RBP29.43■■■□□ 2.3
SDCCAG3-201ENST00000298537 ANP32BQ92688 251 aaKnown RBP29.43■■■□□ 2.3
SDCCAG3-201ENST00000298537 ZNRF3Q9ULT6 936 aa29.43■■■□□ 2.3
SDCCAG3-201ENST00000298537 SCAF8Q9UPN6 1271 aaKnown RBP29.43■■■□□ 2.3
SDCCAG3-201ENST00000298537 HPSEQ9Y251 543 aa29.43■■■□□ 2.3
SDCCAG3-201ENST00000298537 SASS6Q6UVJ0 657 aa29.43■■■□□ 2.3
SDCCAG3-201ENST00000298537 LUZP1Q86V48 1076 aa29.43■■■□□ 2.3
SDCCAG3-201ENST00000298537 CDAN1Q8IWY9 1227 aa29.43■■■□□ 2.3
SDCCAG3-201ENST00000298537 NIM1KQ8IY84 436 aa29.43■■■□□ 2.3
SDCCAG3-201ENST00000298537 JMYQ8N9B5 988 aa29.43■■■□□ 2.3
SDCCAG3-201ENST00000298537 SDF4Q9BRK5 362 aa29.43■■■□□ 2.3
SDCCAG3-201ENST00000298537 BRMS1Q9HCU9 246 aa29.43■■■□□ 2.3
SDCCAG3-201ENST00000298537 USP49Q70CQ1 688 aa29.42■■■□□ 2.3
SDCCAG3-201ENST00000298537 SPZ1Q9BXG8 430 aa29.42■■■□□ 2.3
SDCCAG3-201ENST00000298537 NFKBIEO00221 500 aa29.42■■■□□ 2.3
SDCCAG3-201ENST00000298537 CUTAO60888 179 aa29.42■■■□□ 2.3
SDCCAG3-201ENST00000298537 CERKLQ49MI3 558 aaPredicted RBP29.42■■■□□ 2.3
SDCCAG3-201ENST00000298537 TTBK2Q6IQ55 1244 aa29.42■■■□□ 2.3
SDCCAG3-201ENST00000298537 PDLIM2Q96JY6 352 aa29.42■■■□□ 2.3
SDCCAG3-201ENST00000298537 SGIP1Q9BQI5 828 aa29.42■■■□□ 2.3
SDCCAG3-201ENST00000298537 MYO3BQ8WXR4 1341 aa29.41■■■□□ 2.3
SDCCAG3-201ENST00000298537 TRIM75PA6NK02 468 aa29.41■■■□□ 2.3
SDCCAG3-201ENST00000298537 PTPREP23469 700 aa29.41■■■□□ 2.3
SDCCAG3-201ENST00000298537 BLIDQ8IZY5 108 aa29.41■■■□□ 2.3
SDCCAG3-201ENST00000298537 BARHL2Q9NY43 387 aa29.41■■■□□ 2.3
SDCCAG3-201ENST00000298537 C11orf57Q6ZUT1 292 aaPredicted RBP29.4■■■□□ 2.3
SDCCAG3-201ENST00000298537 RTN4Q9NQC3 1192 aaKnown RBP29.4■■■□□ 2.3
SDCCAG3-201ENST00000298537 SYKP43405 635 aa29.4■■■□□ 2.3
SDCCAG3-201ENST00000298537 SEPT2Q15019 361 aa29.4■■■□□ 2.3
SDCCAG3-201ENST00000298537 CBX8Q9HC52 389 aa29.4■■■□□ 2.3
SDCCAG3-201ENST00000298537 GREB1LQ9C091 1923 aaPredicted RBP29.4■■■□□ 2.3
SDCCAG3-201ENST00000298537 SNHG28P0DPA3 235 aa29.39■■■□□ 2.3
SDCCAG3-201ENST00000298537 SIAH1Q8IUQ4 282 aa29.39■■■□□ 2.3
SDCCAG3-201ENST00000298537 PCDHA4Q9UN74 947 aa29.39■■■□□ 2.3
SDCCAG3-201ENST00000298537 BCS1LQ9Y276 419 aa29.39■■■□□ 2.3
SDCCAG3-201ENST00000298537 M0R2N6 131 aa29.39■■■□□ 2.3
SDCCAG3-201ENST00000298537 DLGAP5Q15398 846 aa29.39■■■□□ 2.3
SDCCAG3-201ENST00000298537 TTC38Q5R3I4 469 aa29.39■■■□□ 2.3
SDCCAG3-201ENST00000298537 TATDN1Q6P1N9 297 aa29.39■■■□□ 2.3
SDCCAG3-201ENST00000298537 CSRNP1Q96S65 589 aa29.39■■■□□ 2.3
SDCCAG3-201ENST00000298537 LZTS2Q9BRK4 669 aa29.39■■■□□ 2.3
SDCCAG3-201ENST00000298537 TAOK3Q9H2K8 898 aa29.39■■■□□ 2.3
SDCCAG3-201ENST00000298537 ZNF70Q9UC06 446 aaPredicted RBP29.39■■■□□ 2.3
SDCCAG3-201ENST00000298537 CTAGE5O15320 804 aa29.38■■■□□ 2.29
SDCCAG3-201ENST00000298537 RAD21O60216 631 aa29.38■■■□□ 2.29
SDCCAG3-201ENST00000298537 EEF2P13639 858 aaKnown RBP29.38■■■□□ 2.29
SDCCAG3-201ENST00000298537 SLC16A2P36021 539 aa29.38■■■□□ 2.29
SDCCAG3-201ENST00000298537 KCTD1Q719H9 257 aa29.38■■■□□ 2.29
SDCCAG3-201ENST00000298537 FAM200AQ8TCP9 573 aa29.38■■■□□ 2.29
SDCCAG3-201ENST00000298537 CSRNP2Q9H175 543 aa29.38■■■□□ 2.29
SDCCAG3-201ENST00000298537 NPM3O75607 178 aaKnown RBP29.38■■■□□ 2.29
SDCCAG3-201ENST00000298537 SH3GLB2Q9NR46 395 aa29.38■■■□□ 2.29
SDCCAG3-201ENST00000298537 PCDHA6Q9UN73 950 aa29.38■■■□□ 2.29
SDCCAG3-201ENST00000298537 PCDHA8Q9Y5H6 950 aa29.38■■■□□ 2.29
SDCCAG3-201ENST00000298537 LONRF3Q496Y0 759 aa29.37■■■□□ 2.29
SDCCAG3-201ENST00000298537 OGFOD1Q8N543 542 aa29.37■■■□□ 2.29
SDCCAG3-201ENST00000298537 TRIM34Q9BYJ4 488 aa29.37■■■□□ 2.29
SDCCAG3-201ENST00000298537 ENTPD3O75355 529 aa29.37■■■□□ 2.29
SDCCAG3-201ENST00000298537 BRCA1P38398 1863 aaKnown RBP29.37■■■□□ 2.29
SDCCAG3-201ENST00000298537 PRELPP51888 382 aa29.37■■■□□ 2.29
SDCCAG3-201ENST00000298537 PLCB2Q00722 1185 aa29.37■■■□□ 2.29
SDCCAG3-201ENST00000298537 RIOX1Q9H6W3 641 aa29.37■■■□□ 2.29
SDCCAG3-201ENST00000298537 VEZTQ9HBM0 779 aa29.37■■■□□ 2.29
SDCCAG3-201ENST00000298537 KCNH3Q9ULD8 1083 aa29.37■■■□□ 2.29
SDCCAG3-201ENST00000298537 SRPRBQ9Y5M8 271 aaKnown RBP29.37■■■□□ 2.29
SDCCAG3-201ENST00000298537 ATRNL1Q5VV63 1379 aa29.36■■■□□ 2.29
SDCCAG3-201ENST00000298537 RASSF7Q02833 373 aa29.36■■■□□ 2.29
SDCCAG3-201ENST00000298537 ZNF543Q08ER8 600 aa29.36■■■□□ 2.29
SDCCAG3-201ENST00000298537 RRP36Q96EU6 259 aaKnown RBP29.36■■■□□ 2.29
SDCCAG3-201ENST00000298537 CCDC17Q96LX7 622 aa29.36■■■□□ 2.29
SDCCAG3-201ENST00000298537 MYH4Q9Y623 1939 aa29.36■■■□□ 2.29
SDCCAG3-201ENST00000298537 FAM237AA0A1B0GTK4 181 aa29.36■■■□□ 2.29
SDCCAG3-201ENST00000298537 FOXN1O15353 648 aa29.36■■■□□ 2.29
SDCCAG3-201ENST00000298537 NAPAP54920 295 aa29.36■■■□□ 2.29
SDCCAG3-201ENST00000298537 UVSSAQ2YD98 709 aa29.36■■■□□ 2.29
SDCCAG3-201ENST00000298537 SOGA3Q5TF21 947 aa29.36■■■□□ 2.29
SDCCAG3-201ENST00000298537 FOXP4Q8IVH2 680 aaPredicted RBP29.36■■■□□ 2.29
SDCCAG3-201ENST00000298537 CNTNAP1P78357 1384 aa29.35■■■□□ 2.29
SDCCAG3-201ENST00000298537 BIN1O00499 593 aa29.35■■■□□ 2.29
SDCCAG3-201ENST00000298537 EGFRP00533 1210 aa29.35■■■□□ 2.29
SDCCAG3-201ENST00000298537 MCM7P33993 719 aa29.35■■■□□ 2.29
SDCCAG3-201ENST00000298537 PTGER2P43116 358 aa29.35■■■□□ 2.29
SDCCAG3-201ENST00000298537 PTGDRQ13258 359 aa29.35■■■□□ 2.29
SDCCAG3-201ENST00000298537 NLGN2Q8NFZ4 835 aa29.35■■■□□ 2.29
SDCCAG3-201ENST00000298537 COA7Q96BR5 231 aa29.35■■■□□ 2.29
SDCCAG3-201ENST00000298537 NOL7Q9UMY1 257 aaKnown RBP29.35■■■□□ 2.29
SDCCAG3-201ENST00000298537 CALML3P27482 149 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms