RNA–Protein interactions for RNA: ENST00000297354.6

SBSPON-201, Transcript of somatomedin B and thrombospondin type 1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SBSPON, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPON-201ENST00000297354 DONSONQ9NYP3 566 aa18.63■□□□□ 0.57
SBSPON-201ENST00000297354 LRP2BPQ9P2M1 347 aa18.63■□□□□ 0.57
SBSPON-201ENST00000297354 YEATS2Q9ULM3 1422 aa18.63■□□□□ 0.57
SBSPON-201ENST00000297354 MAGEA1P43355 309 aa18.62■□□□□ 0.57
SBSPON-201ENST00000297354 HDLBPQ00341 1268 aaKnown RBP18.62■□□□□ 0.57
SBSPON-201ENST00000297354 TRIM68Q6AZZ1 485 aa18.62■□□□□ 0.57
SBSPON-201ENST00000297354 NOC4LQ9BVI4 516 aaKnown RBP18.62■□□□□ 0.57
SBSPON-201ENST00000297354 TEX11Q8IYF3 940 aa18.62■□□□□ 0.57
SBSPON-201ENST00000297354 APPBP2Q92624 585 aa18.62■□□□□ 0.57
SBSPON-201ENST00000297354 FAM89AQ96GI7 184 aa18.62■□□□□ 0.57
SBSPON-201ENST00000297354 MS4A14Q96JA4 679 aa18.62■□□□□ 0.57
SBSPON-201ENST00000297354 ADD3Q9UEY8 706 aaKnown RBP18.62■□□□□ 0.57
SBSPON-201ENST00000297354 GGT7Q9UJ14 662 aa18.62■□□□□ 0.57
SBSPON-201ENST00000297354 HPS5Q9UPZ3 1129 aa18.62■□□□□ 0.57
SBSPON-201ENST00000297354 SETBP1Q9Y6X0 1596 aa18.62■□□□□ 0.57
SBSPON-201ENST00000297354 HEXIM1O94992 359 aaKnown RBP18.62■□□□□ 0.57
SBSPON-201ENST00000297354 MAP2K1Q02750 393 aaPredicted RBP18.62■□□□□ 0.57
SBSPON-201ENST00000297354 TRIM6Q9C030 488 aaPredicted RBP18.62■□□□□ 0.57
SBSPON-201ENST00000297354 NBPF3Q9H094 633 aa18.62■□□□□ 0.57
SBSPON-201ENST00000297354 ARMT1Q9H993 441 aa18.62■□□□□ 0.57
SBSPON-201ENST00000297354 SEC31BQ9NQW1 1179 aa18.62■□□□□ 0.57
SBSPON-201ENST00000297354 CWC25Q9NXE8 425 aaPredicted RBP18.62■□□□□ 0.57
SBSPON-201ENST00000297354 ZMYM6O95789 1325 aa18.62■□□□□ 0.57
SBSPON-201ENST00000297354 PTPRMP28827 1452 aa18.62■□□□□ 0.57
SBSPON-201ENST00000297354 PSMA7O14818 248 aa18.61■□□□□ 0.57
SBSPON-201ENST00000297354 VIMP08670 466 aaKnown RBP18.61■□□□□ 0.57
SBSPON-201ENST00000297354 ERCC5P28715 1186 aaPredicted RBP18.61■□□□□ 0.57
SBSPON-201ENST00000297354 OR2W6PQ8NHA6 318 aa18.61■□□□□ 0.57
SBSPON-201ENST00000297354 PAGE5Q96GU1 130 aa18.61■□□□□ 0.57
SBSPON-201ENST00000297354 RNF225M0QZC1 329 aaPredicted RBP18.61■□□□□ 0.57
SBSPON-201ENST00000297354 EYA2O00167 538 aa18.61■□□□□ 0.57
SBSPON-201ENST00000297354 MYO1EQ12965 1108 aa18.61■□□□□ 0.57
SBSPON-201ENST00000297354 IFIT5Q13325 482 aaKnown RBP18.61■□□□□ 0.57
SBSPON-201ENST00000297354 RNPC3Q96LT9 517 aaKnown RBP18.61■□□□□ 0.57
SBSPON-201ENST00000297354 NACAP1Q9BZK3 213 aa18.61■□□□□ 0.57
SBSPON-201ENST00000297354 LACRTQ9GZZ8 138 aa18.61■□□□□ 0.57
SBSPON-201ENST00000297354 USP5P45974 858 aa18.61■□□□□ 0.57
SBSPON-201ENST00000297354 ZNF790Q6PG37 636 aa18.61■□□□□ 0.57
SBSPON-201ENST00000297354 ZSCAN5CA6NGD5 496 aaPredicted RBP18.6■□□□□ 0.57
SBSPON-201ENST00000297354 TBX2Q13207 712 aaPredicted RBP18.6■□□□□ 0.57
SBSPON-201ENST00000297354 ADAT2Q7Z6V5 191 aaKnown RBP18.6■□□□□ 0.57
SBSPON-201ENST00000297354 SUGP1Q8IWZ8 645 aaKnown RBP18.6■□□□□ 0.57
SBSPON-201ENST00000297354 PACSIN2Q9UNF0 486 aaPredicted RBP18.6■□□□□ 0.57
SBSPON-201ENST00000297354 MBD4O95243 580 aa18.6■□□□□ 0.57
SBSPON-201ENST00000297354 FTCDO95954 541 aa18.6■□□□□ 0.57
SBSPON-201ENST00000297354 PARP1P09874 1014 aaKnown RBP18.6■□□□□ 0.57
SBSPON-201ENST00000297354 IFNAR2P48551 515 aa18.6■□□□□ 0.57
SBSPON-201ENST00000297354 ANTXR2P58335 489 aa18.6■□□□□ 0.57
SBSPON-201ENST00000297354 ASIC1P78348 528 aa18.6■□□□□ 0.57
SBSPON-201ENST00000297354 RASSF7Q02833 373 aa18.6■□□□□ 0.57
SBSPON-201ENST00000297354 SCARF1Q14162 830 aa18.6■□□□□ 0.57
SBSPON-201ENST00000297354 FAM133BQ5BKY9 247 aaKnown RBP18.6■□□□□ 0.57
SBSPON-201ENST00000297354 RRAGAQ7L523 313 aa18.6■□□□□ 0.57
SBSPON-201ENST00000297354 TBC1D10CQ8IV04 446 aa18.6■□□□□ 0.57
SBSPON-201ENST00000297354 CCDC51Q96ER9 411 aa18.6■□□□□ 0.57
SBSPON-201ENST00000297354 AGPAT5Q9NUQ2 364 aa18.6■□□□□ 0.57
SBSPON-201ENST00000297354 CUL4BQ13620 913 aa18.6■□□□□ 0.57
SBSPON-201ENST00000297354 IFT20Q8IY31 132 aa18.6■□□□□ 0.57
SBSPON-201ENST00000297354 BAZ2BQ9UIF8 2168 aaKnown RBP18.59■□□□□ 0.57
SBSPON-201ENST00000297354 TMOD1P28289 359 aa18.59■□□□□ 0.57
SBSPON-201ENST00000297354 KLK7P49862 253 aa18.59■□□□□ 0.57
SBSPON-201ENST00000297354 PTGDRQ13258 359 aa18.59■□□□□ 0.57
SBSPON-201ENST00000297354 KRT71Q3SY84 523 aa18.59■□□□□ 0.57
SBSPON-201ENST00000297354 NRXN1Q9ULB1 1477 aa18.59■□□□□ 0.57
SBSPON-201ENST00000297354 TMC4Q7Z404 712 aa18.59■□□□□ 0.57
SBSPON-201ENST00000297354 TBC1D1Q86TI0 1168 aaPredicted RBP18.59■□□□□ 0.57
SBSPON-201ENST00000297354 AMOTL1Q8IY63 956 aa18.59■□□□□ 0.57
SBSPON-201ENST00000297354 MAGEB6Q8N7X4 407 aa18.59■□□□□ 0.57
SBSPON-201ENST00000297354 NHEJ1Q9H9Q4 299 aaPredicted RBP18.59■□□□□ 0.57
SBSPON-201ENST00000297354 SEPT11Q9NVA2 429 aaKnown RBP18.59■□□□□ 0.57
SBSPON-201ENST00000297354 GCOM1H8Y6P7 765 aaPredicted RBP18.59■□□□□ 0.57
SBSPON-201ENST00000297354 MYZAPP0CAP1 466 aa18.59■□□□□ 0.57
SBSPON-201ENST00000297354 CTNNA1P35221 906 aaKnown RBP18.59■□□□□ 0.57
SBSPON-201ENST00000297354 CCT8L2Q96SF2 557 aa18.59■□□□□ 0.57
SBSPON-201ENST00000297354 FAM167BQ9BTA0 163 aa18.59■□□□□ 0.57
SBSPON-201ENST00000297354 NUTM2BA6NNL0 878 aaPredicted RBP18.58■□□□□ 0.57
SBSPON-201ENST00000297354 NUTM2EB1AL46 878 aaPredicted RBP18.58■□□□□ 0.57
SBSPON-201ENST00000297354 PTPREP23469 700 aa18.58■□□□□ 0.57
SBSPON-201ENST00000297354 LSP1P33241 339 aa18.58■□□□□ 0.57
SBSPON-201ENST00000297354 PTPAQ15257 358 aa18.58■□□□□ 0.57
SBSPON-201ENST00000297354 CCDC170Q8IYT3 715 aa18.58■□□□□ 0.57
SBSPON-201ENST00000297354 CACNA2D3Q8IZS8 1091 aa18.58■□□□□ 0.57
SBSPON-201ENST00000297354 SPDL1Q96EA4 605 aa18.58■□□□□ 0.57
SBSPON-201ENST00000297354 ZIM3Q96PE6 472 aa18.58■□□□□ 0.57
SBSPON-201ENST00000297354 KIAA1210Q9ULL0 1709 aa18.58■□□□□ 0.57
SBSPON-201ENST00000297354 PDE2AO00408 941 aaPredicted RBP18.58■□□□□ 0.56
SBSPON-201ENST00000297354 RAD21O60216 631 aa18.58■□□□□ 0.56
SBSPON-201ENST00000297354 EHHADHQ08426 723 aa18.58■□□□□ 0.56
SBSPON-201ENST00000297354 CPSF2Q9P2I0 782 aaKnown RBP18.58■□□□□ 0.56
SBSPON-201ENST00000297354 BRD2P25440 801 aaKnown RBP18.58■□□□□ 0.56
SBSPON-201ENST00000297354 AMOTQ4VCS5 1084 aa18.58■□□□□ 0.56
SBSPON-201ENST00000297354 KCNV1Q6PIU1 500 aa18.58■□□□□ 0.56
SBSPON-201ENST00000297354 FMNL3Q8IVF7 1028 aa18.58■□□□□ 0.56
SBSPON-201ENST00000297354 MGARPQ8TDB4 240 aa18.58■□□□□ 0.56
SBSPON-201ENST00000297354 UBN2Q6ZU65 1347 aa18.57■□□□□ 0.56
SBSPON-201ENST00000297354 SH3TC1Q8TE82 1336 aa18.57■□□□□ 0.56
SBSPON-201ENST00000297354 ZNF532Q9HCE3 1301 aa18.57■□□□□ 0.56
SBSPON-201ENST00000297354 ZFYP08048 801 aaPredicted RBP18.57■□□□□ 0.56
SBSPON-201ENST00000297354 KRT2P35908 639 aa18.57■□□□□ 0.56
SBSPON-201ENST00000297354 NAA35Q5VZE5 725 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms