RNA–Protein interactions for RNA: ENST00000296142.3

RTP3-201, Transcript of receptor transporter protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTP3, Length 1,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3-201ENST00000296142 SDR42E1Q8WUS8 393 aa10.15□□□□□ -0.78
RTP3-201ENST00000296142 ATG4CQ96DT6 458 aa10.15□□□□□ -0.78
RTP3-201ENST00000296142 IL1RAPL2Q9NP60 686 aa10.15□□□□□ -0.78
RTP3-201ENST00000296142 PDLIM7Q9NR12 457 aa10.15□□□□□ -0.78
RTP3-201ENST00000296142 MCM9Q9NXL9 1143 aa10.15□□□□□ -0.78
RTP3-201ENST00000296142 EXOC6BQ9Y2D4 811 aa10.15□□□□□ -0.78
RTP3-201ENST00000296142 ZNF236Q9UL36 1845 aa10.14□□□□□ -0.79
RTP3-201ENST00000296142 CYP2D7A0A087X1C5 515 aa10.14□□□□□ -0.79
RTP3-201ENST00000296142 RAD21O60216 631 aa10.14□□□□□ -0.79
RTP3-201ENST00000296142 PGK1P00558 417 aa10.14□□□□□ -0.79
RTP3-201ENST00000296142 PGK2P07205 417 aa10.14□□□□□ -0.79
RTP3-201ENST00000296142 HOXC6P09630 235 aa10.14□□□□□ -0.79
RTP3-201ENST00000296142 USP14P54578 494 aa10.14□□□□□ -0.79
RTP3-201ENST00000296142 LRRC41Q15345 812 aa10.14□□□□□ -0.79
RTP3-201ENST00000296142 BMP2KLQ5H9B9 411 aa10.14□□□□□ -0.79
RTP3-201ENST00000296142 FAM109BQ6ICB4 259 aaPredicted RBP10.14□□□□□ -0.79
RTP3-201ENST00000296142 TTC6Q86TZ1 520 aa10.14□□□□□ -0.79
RTP3-201ENST00000296142 AACSQ86V21 672 aa10.14□□□□□ -0.79
RTP3-201ENST00000296142 USP38Q8NB14 1042 aa10.14□□□□□ -0.79
RTP3-201ENST00000296142 ARRDC4Q8NCT1 418 aa10.14□□□□□ -0.79
RTP3-201ENST00000296142 SSH3Q8TE77 659 aa10.14□□□□□ -0.79
RTP3-201ENST00000296142 PPM1EQ8WY54 764 aa10.14□□□□□ -0.79
RTP3-201ENST00000296142 SPATC1LQ9H0A9 340 aa10.14□□□□□ -0.79
RTP3-201ENST00000296142 GPR108Q9NPR9 543 aa10.14□□□□□ -0.79
RTP3-201ENST00000296142 PRDM6Q9NQX0 595 aa10.14□□□□□ -0.79
RTP3-201ENST00000296142 GINM1Q9NU53 330 aa10.14□□□□□ -0.79
RTP3-201ENST00000296142 MYH4Q9Y623 1939 aa10.14□□□□□ -0.79
RTP3-201ENST00000296142 MAGEB6P1A0A0J9YX57 407 aa10.13□□□□□ -0.79
RTP3-201ENST00000296142 PRKAB2O43741 272 aa10.13□□□□□ -0.79
RTP3-201ENST00000296142 MSCO60682 206 aa10.13□□□□□ -0.79
RTP3-201ENST00000296142 CHGBP05060 677 aa10.13□□□□□ -0.79
RTP3-201ENST00000296142 SLC4A3P48751 1232 aa10.13□□□□□ -0.79
RTP3-201ENST00000296142 IRX5P78411 483 aaPredicted RBP10.13□□□□□ -0.79
RTP3-201ENST00000296142 COG2Q14746 738 aa10.13□□□□□ -0.79
RTP3-201ENST00000296142 LBX2Q6XYB7 198 aa10.13□□□□□ -0.79
RTP3-201ENST00000296142 SKAP1Q86WV1 359 aa10.13□□□□□ -0.79
RTP3-201ENST00000296142 STK11IPQ8N1F8 1099 aa10.13□□□□□ -0.79
RTP3-201ENST00000296142 RIOK1Q9BRS2 568 aaKnown RBP10.13□□□□□ -0.79
RTP3-201ENST00000296142 LNPKQ9C0E8 428 aa10.13□□□□□ -0.79
RTP3-201ENST00000296142 EHD4Q9H223 541 aa10.13□□□□□ -0.79
RTP3-201ENST00000296142 DCTPP1Q9H773 170 aa10.13□□□□□ -0.79
RTP3-201ENST00000296142 FBXO28Q9NVF7 368 aa10.13□□□□□ -0.79
RTP3-201ENST00000296142 RAPGEFL1Q9UHV5 662 aa10.13□□□□□ -0.79
RTP3-201ENST00000296142 SEPT4O43236 478 aa10.12□□□□□ -0.79
RTP3-201ENST00000296142 PQBP1O60828 265 aaKnown RBP10.12□□□□□ -0.79
RTP3-201ENST00000296142 FLOT1O75955 427 aa10.12□□□□□ -0.79
RTP3-201ENST00000296142 IGHA2P01877 340 aa10.12□□□□□ -0.79
RTP3-201ENST00000296142 AKR1B1P15121 316 aa10.12□□□□□ -0.79
RTP3-201ENST00000296142 FOSL2P15408 326 aa10.12□□□□□ -0.79
RTP3-201ENST00000296142 MAP3K12Q12852 859 aa10.12□□□□□ -0.79
RTP3-201ENST00000296142 SIAH1Q8IUQ4 282 aa10.12□□□□□ -0.79
RTP3-201ENST00000296142 LCORLQ8N3X6 602 aa10.12□□□□□ -0.79
RTP3-201ENST00000296142 MAML3Q96JK9 1138 aa10.12□□□□□ -0.79
RTP3-201ENST00000296142 ZNF512BQ96KM6 892 aaPredicted RBP10.12□□□□□ -0.79
RTP3-201ENST00000296142 RNPC3Q96LT9 517 aaKnown RBP10.12□□□□□ -0.79
RTP3-201ENST00000296142 DNAJC2Q99543 621 aaKnown RBP10.12□□□□□ -0.79
RTP3-201ENST00000296142 ARMT1Q9H993 441 aa10.12□□□□□ -0.79
RTP3-201ENST00000296142 GOLIM4O00461 696 aa10.11□□□□□ -0.79
RTP3-201ENST00000296142 PDE6AP16499 860 aa10.11□□□□□ -0.79
RTP3-201ENST00000296142 DSG3P32926 999 aa10.11□□□□□ -0.79
RTP3-201ENST00000296142 GABPAQ06546 454 aa10.11□□□□□ -0.79
RTP3-201ENST00000296142 GRIN2CQ14957 1233 aa10.11□□□□□ -0.79
RTP3-201ENST00000296142 SLC9C2Q5TAH2 1124 aa10.11□□□□□ -0.79
RTP3-201ENST00000296142 OLFML2BQ68BL8 750 aa10.11□□□□□ -0.79
RTP3-201ENST00000296142 XPNPEP3Q9NQH7 507 aa10.11□□□□□ -0.79
RTP3-201ENST00000296142 HOXC10Q9NYD6 342 aa10.11□□□□□ -0.79
RTP3-201ENST00000296142 ZNF532Q9HCE3 1301 aa10.11□□□□□ -0.79
RTP3-201ENST00000296142 GRXCR1A8MXD5 290 aa10.1□□□□□ -0.79
RTP3-201ENST00000296142 STRNO43815 780 aa10.1□□□□□ -0.79
RTP3-201ENST00000296142 CDC45O75419 566 aa10.1□□□□□ -0.79
RTP3-201ENST00000296142 FCER1AP12319 257 aa10.1□□□□□ -0.79
RTP3-201ENST00000296142 RAG1P15918 1043 aa10.1□□□□□ -0.79
RTP3-201ENST00000296142 TMEM132BQ14DG7 1078 aa10.1□□□□□ -0.79
RTP3-201ENST00000296142 HSP90AB4PQ58FF6 505 aa10.1□□□□□ -0.79
RTP3-201ENST00000296142 CEP85Q6P2H3 762 aa10.1□□□□□ -0.79
RTP3-201ENST00000296142 CHMP4CQ96CF2 233 aa10.1□□□□□ -0.79
RTP3-201ENST00000296142 TBC1D32Q96NH3 1257 aa10.1□□□□□ -0.79
RTP3-201ENST00000296142 MMP19Q99542 508 aa10.1□□□□□ -0.79
RTP3-201ENST00000296142 CRNKL1Q9BZJ0 848 aaKnown RBP10.1□□□□□ -0.79
RTP3-201ENST00000296142 DCP1AQ9NPI6 582 aaPredicted RBP10.1□□□□□ -0.79
RTP3-201ENST00000296142 REV3LO60673 3130 aa10.1□□□□□ -0.79
RTP3-201ENST00000296142 MYADML2A6NDP7 307 aa10.09□□□□□ -0.79
RTP3-201ENST00000296142 CLTBP09497 229 aa10.09□□□□□ -0.79
RTP3-201ENST00000296142 PBX2P40425 430 aa10.09□□□□□ -0.79
RTP3-201ENST00000296142 SMAD3P84022 425 aaKnown RBP10.09□□□□□ -0.79
RTP3-201ENST00000296142 ICA1Q05084 483 aa10.09□□□□□ -0.79
RTP3-201ENST00000296142 SNX17Q15036 470 aa10.09□□□□□ -0.79
RTP3-201ENST00000296142 NUP88Q99567 741 aaPredicted RBP10.09□□□□□ -0.79
RTP3-201ENST00000296142 C22orf23Q9BZE7 217 aa10.09□□□□□ -0.79
RTP3-201ENST00000296142 TMEM39AQ9NV64 488 aa10.09□□□□□ -0.79
RTP3-201ENST00000296142 PRRC2BQ5JSZ5 2229 aaKnown RBP10.09□□□□□ -0.79
RTP3-201ENST00000296142 SPTBN5Q9NRC6 3674 aaKnown RBP10.09□□□□□ -0.79
RTP3-201ENST00000296142 A0A1W2PQ45 241 aaPredicted RBP10.08□□□□□ -0.8
RTP3-201ENST00000296142 A0A1W2PQY0 241 aa10.08□□□□□ -0.8
RTP3-201ENST00000296142 MBD4O95243 580 aa10.08□□□□□ -0.8
RTP3-201ENST00000296142 ACRP10323 421 aa10.08□□□□□ -0.8
RTP3-201ENST00000296142 RARBP10826 455 aa10.08□□□□□ -0.8
RTP3-201ENST00000296142 EEF2P13639 858 aaKnown RBP10.08□□□□□ -0.8
RTP3-201ENST00000296142 MFAP1P55081 439 aaKnown RBP10.08□□□□□ -0.8
RTP3-201ENST00000296142 CCDC85BQ15834 202 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms