RNA–Protein interactions for RNA: ENST00000295400.10

TGFA-201, Transcript of transforming growth factor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFA, Length 4,310 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-201ENST00000295400 USP17L1Q7RTZ2 530 aa12.97□□□□□ -0.33
TGFA-201ENST00000295400 MICALL1Q8N3F8 863 aa12.97□□□□□ -0.33
TGFA-201ENST00000295400 HPDP32754 393 aaPredicted RBP12.97□□□□□ -0.33
TGFA-201ENST00000295400 COPB1P53618 953 aaKnown RBP12.97□□□□□ -0.33
TGFA-201ENST00000295400 GTF2IP78347 998 aa12.97□□□□□ -0.33
TGFA-201ENST00000295400 CYP27A1Q02318 531 aa12.97□□□□□ -0.33
TGFA-201ENST00000295400 SP4Q02446 784 aa12.97□□□□□ -0.33
TGFA-201ENST00000295400 LRRC41Q15345 812 aa12.97□□□□□ -0.33
TGFA-201ENST00000295400 KLHL7Q8IXQ5 586 aa12.97□□□□□ -0.33
TGFA-201ENST00000295400 GPR161Q8N6U8 529 aaKnown RBP12.97□□□□□ -0.33
TGFA-201ENST00000295400 ANKARQ7Z5J8 1434 aa12.96□□□□□ -0.33
TGFA-201ENST00000295400 SPDYE3A6NKU9 549 aa12.96□□□□□ -0.33
TGFA-201ENST00000295400 EFCAB8A8MWE9 144 aa12.96□□□□□ -0.33
TGFA-201ENST00000295400 UBAP1LF5GYI3 381 aa12.96□□□□□ -0.33
TGFA-201ENST00000295400 CACNB1Q02641 598 aaPredicted RBP12.96□□□□□ -0.33
TGFA-201ENST00000295400 SARM1Q6SZW1 724 aa12.96□□□□□ -0.33
TGFA-201ENST00000295400 BRINP3Q76B58 766 aa12.96□□□□□ -0.33
TGFA-201ENST00000295400 SECISBP2LQ93073 1101 aaKnown RBP12.96□□□□□ -0.33
TGFA-201ENST00000295400 PLCD4Q9BRC7 762 aa12.96□□□□□ -0.33
TGFA-201ENST00000295400 SRP68Q9UHB9 627 aaKnown RBP12.96□□□□□ -0.33
TGFA-201ENST00000295400 EPN1Q9Y6I3 576 aaPredicted RBP12.96□□□□□ -0.33
TGFA-201ENST00000295400 UBN2Q6ZU65 1347 aa12.96□□□□□ -0.33
TGFA-201ENST00000295400 SCNN1DP51172 638 aa12.96□□□□□ -0.33
TGFA-201ENST00000295400 DMTNQ08495 405 aa12.96□□□□□ -0.33
TGFA-201ENST00000295400 CALCRLQ16602 461 aa12.96□□□□□ -0.33
TGFA-201ENST00000295400 MFSD14BQ5SR56 506 aa12.96□□□□□ -0.33
TGFA-201ENST00000295400 REXO1Q8N1G1 1221 aaKnown RBP12.96□□□□□ -0.33
TGFA-201ENST00000295400 LY9Q9HBG7 655 aa12.96□□□□□ -0.33
TGFA-201ENST00000295400 PRDX5P30044 214 aa12.96□□□□□ -0.34
TGFA-201ENST00000295400 IL6STP40189 918 aaPredicted RBP12.96□□□□□ -0.34
TGFA-201ENST00000295400 ANTXR2P58335 489 aa12.96□□□□□ -0.34
TGFA-201ENST00000295400 SLFN14P0C7P3 912 aa12.95□□□□□ -0.34
TGFA-201ENST00000295400 RNF26Q9BY78 433 aaPredicted RBP12.95□□□□□ -0.34
TGFA-201ENST00000295400 PARD6BQ9BYG5 372 aa12.95□□□□□ -0.34
TGFA-201ENST00000295400 SAR1BQ9Y6B6 198 aa12.95□□□□□ -0.34
TGFA-201ENST00000295400 CXCR5P32302 372 aa12.95□□□□□ -0.34
TGFA-201ENST00000295400 GRIN1Q05586 938 aa12.95□□□□□ -0.34
TGFA-201ENST00000295400 TTC19Q6DKK2 380 aaPredicted RBP12.95□□□□□ -0.34
TGFA-201ENST00000295400 NBPF11Q86T75 865 aa12.95□□□□□ -0.34
TGFA-201ENST00000295400 IFIH1Q9BYX4 1025 aaKnown RBP12.95□□□□□ -0.34
TGFA-201ENST00000295400 KRT13P13646 458 aa12.95□□□□□ -0.34
TGFA-201ENST00000295400 GJC1P36383 396 aa12.95□□□□□ -0.34
TGFA-201ENST00000295400 LIFRP42702 1097 aa12.95□□□□□ -0.34
TGFA-201ENST00000295400 VAV2P52735 878 aa12.95□□□□□ -0.34
TGFA-201ENST00000295400 CNNM4Q6P4Q7 775 aa12.95□□□□□ -0.34
TGFA-201ENST00000295400 RDH13Q8NBN7 331 aa12.95□□□□□ -0.34
TGFA-201ENST00000295400 PAGE5Q96GU1 130 aa12.95□□□□□ -0.34
TGFA-201ENST00000295400 KIAA1210Q9ULL0 1709 aa12.95□□□□□ -0.34
TGFA-201ENST00000295400 CEMIPQ8WUJ3 1361 aa12.95□□□□□ -0.34
TGFA-201ENST00000295400 ANKRD62A6NC57 917 aa12.94□□□□□ -0.34
TGFA-201ENST00000295400 TRIM49BA6NDI0 452 aa12.94□□□□□ -0.34
TGFA-201ENST00000295400 RESP18Q5W5W9 173 aa12.94□□□□□ -0.34
TGFA-201ENST00000295400 NCAPH2Q6IBW4 605 aa12.94□□□□□ -0.34
TGFA-201ENST00000295400 USP17L2Q6R6M4 530 aa12.94□□□□□ -0.34
TGFA-201ENST00000295400 SLC44A5Q8NCS7 719 aa12.94□□□□□ -0.34
TGFA-201ENST00000295400 ERMNQ8TAM6 284 aa12.94□□□□□ -0.34
TGFA-201ENST00000295400 WDR66Q8TBY9 1149 aa12.94□□□□□ -0.34
TGFA-201ENST00000295400 VEZTQ9HBM0 779 aa12.94□□□□□ -0.34
TGFA-201ENST00000295400 GSG1L2A8MUP6 293 aa12.94□□□□□ -0.34
TGFA-201ENST00000295400 PPP2R5BQ15173 497 aa12.94□□□□□ -0.34
TGFA-201ENST00000295400 E4F1Q66K89 784 aaPredicted RBP12.94□□□□□ -0.34
TGFA-201ENST00000295400 FNBP4Q8N3X1 1017 aaPredicted RBP12.94□□□□□ -0.34
TGFA-201ENST00000295400 ISCA1Q9BUE6 129 aa12.94□□□□□ -0.34
TGFA-201ENST00000295400 LRRC27Q9C0I9 530 aa12.94□□□□□ -0.34
TGFA-201ENST00000295400 MYOM1P52179 1685 aa12.94□□□□□ -0.34
TGFA-201ENST00000295400 PP2D1A8MPX8 630 aa12.94□□□□□ -0.34
TGFA-201ENST00000295400 ANKRD65E5RJM6 399 aa12.94□□□□□ -0.34
TGFA-201ENST00000295400 GTPBP6O43824 516 aaPredicted RBP12.94□□□□□ -0.34
TGFA-201ENST00000295400 PTPREP23469 700 aa12.94□□□□□ -0.34
TGFA-201ENST00000295400 C8orf74Q6P047 294 aa12.94□□□□□ -0.34
TGFA-201ENST00000295400 SRPRBQ9Y5M8 271 aaKnown RBP12.94□□□□□ -0.34
TGFA-201ENST00000295400 MRPL12P52815 198 aaKnown RBP12.94□□□□□ -0.34
TGFA-201ENST00000295400 CUL4BQ13620 913 aa12.94□□□□□ -0.34
TGFA-201ENST00000295400 METTL16Q86W50 562 aaKnown RBP12.94□□□□□ -0.34
TGFA-201ENST00000295400 ZNF710Q8N1W2 664 aa12.94□□□□□ -0.34
TGFA-201ENST00000295400 ENOX1Q8TC92 643 aaKnown RBP12.94□□□□□ -0.34
TGFA-201ENST00000295400 GGA1Q9UJY5 639 aa12.94□□□□□ -0.34
TGFA-201ENST00000295400 MNAT1P51948 309 aa12.93□□□□□ -0.34
TGFA-201ENST00000295400 CCZ1BP86790 482 aa12.93□□□□□ -0.34
TGFA-201ENST00000295400 CCZ1P86791 482 aaPredicted RBP12.93□□□□□ -0.34
TGFA-201ENST00000295400 ZSCAN26Q16670 478 aa12.93□□□□□ -0.34
TGFA-201ENST00000295400 LONRF2Q1L5Z9 754 aa12.93□□□□□ -0.34
TGFA-201ENST00000295400 CFAP58Q5T655 872 aa12.93□□□□□ -0.34
TGFA-201ENST00000295400 RBM26Q5T8P6 1007 aaKnown RBP12.93□□□□□ -0.34
TGFA-201ENST00000295400 TRIML1Q8N9V2 468 aa12.93□□□□□ -0.34
TGFA-201ENST00000295400 FAM76AQ8TAV0 307 aa12.93□□□□□ -0.34
TGFA-201ENST00000295400 SPATA31A3Q5VYP0 1347 aa12.93□□□□□ -0.34
TGFA-201ENST00000295400 DDX39AO00148 427 aaKnown RBP12.93□□□□□ -0.34
TGFA-201ENST00000295400 GUCY2FP51841 1108 aa12.93□□□□□ -0.34
TGFA-201ENST00000295400 KIAA0753Q2KHM9 967 aa12.93□□□□□ -0.34
TGFA-201ENST00000295400 GSDMAQ96QA5 445 aa12.93□□□□□ -0.34
TGFA-201ENST00000295400 TUBGCP2Q9BSJ2 902 aa12.93□□□□□ -0.34
TGFA-201ENST00000295400 ZNF335Q9H4Z2 1342 aaPredicted RBP12.93□□□□□ -0.34
TGFA-201ENST00000295400 POLD4Q9HCU8 107 aa12.93□□□□□ -0.34
TGFA-201ENST00000295400 RIPOR2Q9Y4F9 1068 aa12.93□□□□□ -0.34
TGFA-201ENST00000295400 FAM13AO94988 1023 aa12.93□□□□□ -0.34
TGFA-201ENST00000295400 MECOMQ03112 1051 aa12.93□□□□□ -0.34
TGFA-201ENST00000295400 CCDC25Q86WR0 208 aa12.93□□□□□ -0.34
TGFA-201ENST00000295400 WDR24Q96S15 920 aa12.93□□□□□ -0.34
TGFA-201ENST00000295400 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms