RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 GPKOWQ92917 476 aaPredicted RBP eCLIP19.7■□□□□ 0.74
CDC42EP3-201ENST00000295324 ANTXR1Q9H6X2 564 aa19.7■□□□□ 0.74
CDC42EP3-201ENST00000295324 GUCA1BQ9UMX6 200 aa19.7■□□□□ 0.74
CDC42EP3-201ENST00000295324 FAM160B1Q5W0V3 765 aa19.7■□□□□ 0.74
CDC42EP3-201ENST00000295324 RNF34Q969K3 372 aa19.7■□□□□ 0.74
CDC42EP3-201ENST00000295324 SREK1Q8WXA9 508 aaKnown RBP19.7■□□□□ 0.74
CDC42EP3-201ENST00000295324 MAK16Q9BXY0 300 aaKnown RBP19.7■□□□□ 0.74
CDC42EP3-201ENST00000295324 DDX25Q9UHL0 483 aaKnown RBP19.7■□□□□ 0.74
CDC42EP3-201ENST00000295324 MTUS1Q9ULD2 1270 aa19.7■□□□□ 0.74
CDC42EP3-201ENST00000295324 STAMBPO95630 424 aa19.69■□□□□ 0.74
CDC42EP3-201ENST00000295324 DIXDC1Q155Q3 683 aa19.69■□□□□ 0.74
CDC42EP3-201ENST00000295324 NUP58Q9BVL2 599 aa19.69■□□□□ 0.74
CDC42EP3-201ENST00000295324 NBPF3Q9H094 633 aa19.69■□□□□ 0.74
CDC42EP3-201ENST00000295324 UNC13BO14795 1591 aa19.69■□□□□ 0.74
CDC42EP3-201ENST00000295324 NELFCDQ8IXH7 590 aa19.69■□□□□ 0.74
CDC42EP3-201ENST00000295324 SLC10A4Q96EP9 437 aa19.69■□□□□ 0.74
CDC42EP3-201ENST00000295324 ADPGKQ9BRR6 497 aa19.69■□□□□ 0.74
CDC42EP3-201ENST00000295324 KRT19P08727 400 aa19.69■□□□□ 0.74
CDC42EP3-201ENST00000295324 P4HA1P13674 534 aa19.69■□□□□ 0.74
CDC42EP3-201ENST00000295324 RASGRF1Q13972 1273 aa19.69■□□□□ 0.74
CDC42EP3-201ENST00000295324 TSGA10Q9BZW7 698 aa19.69■□□□□ 0.74
CDC42EP3-201ENST00000295324 GPBP1Q86WP2 473 aa19.69■□□□□ 0.74
CDC42EP3-201ENST00000295324 IGSF22Q8N9C0 903 aa19.69■□□□□ 0.74
CDC42EP3-201ENST00000295324 MRPS9P82933 396 aaKnown RBP19.69■□□□□ 0.74
CDC42EP3-201ENST00000295324 LARSQ9P2J5 1176 aaKnown RBP19.69■□□□□ 0.74
CDC42EP3-201ENST00000295324 MECOMQ03112 1051 aa19.68■□□□□ 0.74
CDC42EP3-201ENST00000295324 FAM102BQ5T8I3 360 aa19.68■□□□□ 0.74
CDC42EP3-201ENST00000295324 LCORLQ8N3X6 602 aa19.68■□□□□ 0.74
CDC42EP3-201ENST00000295324 PLEKHG2Q9H7P9 1386 aa19.68■□□□□ 0.74
CDC42EP3-201ENST00000295324 EN1Q05925 392 aaPredicted RBP19.68■□□□□ 0.74
CDC42EP3-201ENST00000295324 PPP1R14CQ8TAE6 165 aa19.68■□□□□ 0.74
CDC42EP3-201ENST00000295324 ZNF521Q96K83 1311 aa19.68■□□□□ 0.74
CDC42EP3-201ENST00000295324 CDHR2Q9BYE9 1310 aa19.68■□□□□ 0.74
CDC42EP3-201ENST00000295324 KCNQ2O43526 872 aa19.68■□□□□ 0.74
CDC42EP3-201ENST00000295324 PRPF6O94906 941 aaKnown RBP19.68■□□□□ 0.74
CDC42EP3-201ENST00000295324 TECP42680 631 aa19.68■□□□□ 0.74
CDC42EP3-201ENST00000295324 TBC1D9BQ66K14 1250 aa19.68■□□□□ 0.74
CDC42EP3-201ENST00000295324 NR1I2O75469 434 aa19.67■□□□□ 0.74
CDC42EP3-201ENST00000295324 CTR9Q6PD62 1173 aa19.67■□□□□ 0.74
CDC42EP3-201ENST00000295324 PI16Q6UXB8 463 aa19.67■□□□□ 0.74
CDC42EP3-201ENST00000295324 RNF26Q9BY78 433 aaPredicted RBP19.67■□□□□ 0.74
CDC42EP3-201ENST00000295324 PTCH1Q13635 1447 aa19.67■□□□□ 0.74
CDC42EP3-201ENST00000295324 PDIA3P30101 505 aaKnown RBP19.67■□□□□ 0.74
CDC42EP3-201ENST00000295324 YWHAEP62258 255 aaKnown RBP19.67■□□□□ 0.74
CDC42EP3-201ENST00000295324 CEP112Q8N8E3 955 aa19.67■□□□□ 0.74
CDC42EP3-201ENST00000295324 hCG_1984214I3L0E3 225 aa19.67■□□□□ 0.74
CDC42EP3-201ENST00000295324 BCRP11274 1271 aa19.67■□□□□ 0.74
CDC42EP3-201ENST00000295324 CD19P15391 556 aa19.67■□□□□ 0.74
CDC42EP3-201ENST00000295324 ZNF713Q8N859 430 aaPredicted RBP19.67■□□□□ 0.74
CDC42EP3-201ENST00000295324 IQCGQ9H095 443 aaKnown RBP19.67■□□□□ 0.74
CDC42EP3-201ENST00000295324 AP5M1Q9H0R1 490 aa19.67■□□□□ 0.74
CDC42EP3-201ENST00000295324 TNNI1P19237 187 aa19.67■□□□□ 0.74
CDC42EP3-201ENST00000295324 NLRP12P59046 1061 aa19.67■□□□□ 0.74
CDC42EP3-201ENST00000295324 CCDC84Q86UT8 332 aaPredicted RBP19.67■□□□□ 0.74
CDC42EP3-201ENST00000295324 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.67■□□□□ 0.74
CDC42EP3-201ENST00000295324 LSG1Q9H089 658 aaKnown RBP19.67■□□□□ 0.74
CDC42EP3-201ENST00000295324 TPCN1Q9ULQ1 816 aa19.67■□□□□ 0.74
CDC42EP3-201ENST00000295324 ASIC2Q16515 512 aa19.67■□□□□ 0.74
CDC42EP3-201ENST00000295324 SRRTQ9BXP5 876 aaKnown RBP19.67■□□□□ 0.74
CDC42EP3-201ENST00000295324 NACA2Q9H009 215 aa19.67■□□□□ 0.74
CDC42EP3-201ENST00000295324 UTP14CQ5TAP6 766 aaKnown RBP19.66■□□□□ 0.74
CDC42EP3-201ENST00000295324 ADALQ6DHV7 355 aa19.66■□□□□ 0.74
CDC42EP3-201ENST00000295324 GOLGA5Q8TBA6 731 aa19.66■□□□□ 0.74
CDC42EP3-201ENST00000295324 M0R2C6 588 aa19.66■□□□□ 0.74
CDC42EP3-201ENST00000295324 SUGCTQ9HAC7 445 aa19.66■□□□□ 0.74
CDC42EP3-201ENST00000295324 RPAP1Q9BWH6 1393 aaPredicted RBP19.66■□□□□ 0.74
CDC42EP3-201ENST00000295324 GNA14O95837 355 aa19.66■□□□□ 0.74
CDC42EP3-201ENST00000295324 STAT2P52630 851 aa19.66■□□□□ 0.74
CDC42EP3-201ENST00000295324 RNF216Q9NWF9 866 aaPredicted RBP19.66■□□□□ 0.74
CDC42EP3-201ENST00000295324 MINPP1Q9UNW1 487 aa19.66■□□□□ 0.74
CDC42EP3-201ENST00000295324 SPOPO43791 374 aa19.66■□□□□ 0.74
CDC42EP3-201ENST00000295324 ASNSP08243 561 aa19.66■□□□□ 0.74
CDC42EP3-201ENST00000295324 KRT9P35527 623 aa19.66■□□□□ 0.74
CDC42EP3-201ENST00000295324 SEL1L2Q5TEA6 688 aa19.66■□□□□ 0.74
CDC42EP3-201ENST00000295324 ZNF830Q96NB3 372 aaPredicted RBP19.66■□□□□ 0.74
CDC42EP3-201ENST00000295324 BAG1Q99933 345 aaPredicted RBP19.66■□□□□ 0.74
CDC42EP3-201ENST00000295324 SPHKAPQ2M3C7 1700 aa19.66■□□□□ 0.74
CDC42EP3-201ENST00000295324 BMS1Q14692 1282 aaKnown RBP19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 APOA5Q6Q788 366 aa19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 FAM160B2Q86V87 743 aa19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 CDHR1Q96JP9 859 aa19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 BTBD18B2RXH4 712 aa19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 CYP21A2P08686 494 aa19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 RFX1P22670 979 aa19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 TICAM2Q86XR7 235 aa19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 RNF169Q8NCN4 708 aa19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 PNMA3Q9UL41 463 aa19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 PALM3A6NDB9 673 aaPredicted RBP19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 PRKAB2O43741 272 aa19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 HSF2BPO75031 334 aa19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 CCDC122Q5T0U0 273 aa19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 STAMQ92783 540 aa19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 JPH2Q9BR39 696 aaPredicted RBP19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 LZTFL1Q9NQ48 299 aa19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 LIG4P49917 911 aa19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 KCTD1Q719H9 257 aa19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 C2orf69Q8N8R5 385 aa19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 BRIP1Q9BX63 1249 aa19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 SPON1Q9HCB6 807 aa19.65■□□□□ 0.74
CDC42EP3-201ENST00000295324 RABGAP1Q9Y3P9 1069 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms