RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 SMARCAL1Q9NZC9 954 aa11.51□□□□□ -0.57
LMX1A-201ENST00000294816 SEMA3EO15041 775 aa11.51□□□□□ -0.57
LMX1A-201ENST00000294816 CIAO1O76071 339 aa11.51□□□□□ -0.57
LMX1A-201ENST00000294816 MBD4O95243 580 aa11.51□□□□□ -0.57
LMX1A-201ENST00000294816 TRIM21P19474 475 aaKnown RBP11.51□□□□□ -0.57
LMX1A-201ENST00000294816 KRT83P78385 493 aa11.51□□□□□ -0.57
LMX1A-201ENST00000294816 CCDC181Q5TID7 509 aa11.51□□□□□ -0.57
LMX1A-201ENST00000294816 IQCEQ6IPM2 695 aa11.51□□□□□ -0.57
LMX1A-201ENST00000294816 SMCR8Q8TEV9 937 aaPredicted RBP11.51□□□□□ -0.57
LMX1A-201ENST00000294816 LACRTQ9GZZ8 138 aa11.51□□□□□ -0.57
LMX1A-201ENST00000294816 ARMT1Q9H993 441 aa11.51□□□□□ -0.57
LMX1A-201ENST00000294816 AATFQ9NY61 560 aaKnown RBP eCLIP11.51□□□□□ -0.57
LMX1A-201ENST00000294816 LIMA1Q9UHB6 759 aaKnown RBP11.51□□□□□ -0.57
LMX1A-201ENST00000294816 HSF2BPO75031 334 aa11.51□□□□□ -0.57
LMX1A-201ENST00000294816 PDE6AP16499 860 aa11.51□□□□□ -0.57
LMX1A-201ENST00000294816 XBP1P17861 261 aa11.51□□□□□ -0.57
LMX1A-201ENST00000294816 CXCR5P32302 372 aa11.51□□□□□ -0.57
LMX1A-201ENST00000294816 RDXP35241 583 aaKnown RBP11.51□□□□□ -0.57
LMX1A-201ENST00000294816 ATP6V1AP38606 617 aa11.51□□□□□ -0.57
LMX1A-201ENST00000294816 CCDC96Q2M329 555 aa11.51□□□□□ -0.57
LMX1A-201ENST00000294816 EARS2Q5JPH6 523 aaKnown RBP11.51□□□□□ -0.57
LMX1A-201ENST00000294816 LDHAL6AQ6ZMR3 332 aa11.51□□□□□ -0.57
LMX1A-201ENST00000294816 ARL8AQ96BM9 186 aa11.51□□□□□ -0.57
LMX1A-201ENST00000294816 ORAI2Q96SN7 254 aa11.51□□□□□ -0.57
LMX1A-201ENST00000294816 MAGEC2Q9UBF1 373 aaPredicted RBP11.51□□□□□ -0.57
LMX1A-201ENST00000294816 FAM184BQ9ULE4 1060 aa11.51□□□□□ -0.57
LMX1A-201ENST00000294816 STK36Q9NRP7 1315 aa11.51□□□□□ -0.57
LMX1A-201ENST00000294816 ZC3H4Q9UPT8 1303 aaKnown RBP11.51□□□□□ -0.57
LMX1A-201ENST00000294816 OPA1O60313 960 aa11.5□□□□□ -0.57
LMX1A-201ENST00000294816 PARP1P09874 1014 aaKnown RBP11.5□□□□□ -0.57
LMX1A-201ENST00000294816 CYLC1P35663 651 aaPredicted RBP11.5□□□□□ -0.57
LMX1A-201ENST00000294816 KCNV1Q6PIU1 500 aa11.5□□□□□ -0.57
LMX1A-201ENST00000294816 GBP6Q6ZN66 633 aa11.5□□□□□ -0.57
LMX1A-201ENST00000294816 SGMS1Q86VZ5 419 aa11.5□□□□□ -0.57
LMX1A-201ENST00000294816 CRACR2BQ8N4Y2 399 aaPredicted RBP11.5□□□□□ -0.57
LMX1A-201ENST00000294816 LRRC1Q9BTT6 524 aa11.5□□□□□ -0.57
LMX1A-201ENST00000294816 AFDNP55196 1824 aaKnown RBP11.5□□□□□ -0.57
LMX1A-201ENST00000294816 TARSL2A2RTX5 802 aaKnown RBP11.5□□□□□ -0.57
LMX1A-201ENST00000294816 TICAM2Q86XR7 235 aa11.5□□□□□ -0.57
LMX1A-201ENST00000294816 EHBP1Q8NDI1 1231 aa11.5□□□□□ -0.57
LMX1A-201ENST00000294816 TRIM47Q96LD4 638 aa11.5□□□□□ -0.57
LMX1A-201ENST00000294816 UBAC1Q9BSL1 405 aa11.5□□□□□ -0.57
LMX1A-201ENST00000294816 DMGDHQ9UI17 866 aaKnown RBP11.5□□□□□ -0.57
LMX1A-201ENST00000294816 UBR1Q8IWV7 1749 aa11.5□□□□□ -0.57
LMX1A-201ENST00000294816 RCCD1A6NED2 376 aa11.5□□□□□ -0.57
LMX1A-201ENST00000294816 WNT7AO00755 349 aa11.5□□□□□ -0.57
LMX1A-201ENST00000294816 KDM6AO15550 1401 aaPredicted RBP11.5□□□□□ -0.57
LMX1A-201ENST00000294816 PRKAB2O43741 272 aa11.5□□□□□ -0.57
LMX1A-201ENST00000294816 KRT2P35908 639 aa11.5□□□□□ -0.57
LMX1A-201ENST00000294816 LIFRP42702 1097 aa11.5□□□□□ -0.57
LMX1A-201ENST00000294816 IFNL3Q8IZI9 196 aa11.5□□□□□ -0.57
LMX1A-201ENST00000294816 HELBQ8NG08 1087 aaPredicted RBP11.5□□□□□ -0.57
LMX1A-201ENST00000294816 GIMAP7Q8NHV1 300 aa11.5□□□□□ -0.57
LMX1A-201ENST00000294816 RPGRIP1Q96KN7 1286 aa11.5□□□□□ -0.57
LMX1A-201ENST00000294816 PLIN2Q99541 437 aa11.5□□□□□ -0.57
LMX1A-201ENST00000294816 NWD2Q9ULI1 1742 aa11.5□□□□□ -0.57
LMX1A-201ENST00000294816 CCDC196A0A1B0GTZ2 297 aa11.49□□□□□ -0.57
LMX1A-201ENST00000294816 MINDY4BA8MYZ0 360 aa11.49□□□□□ -0.57
LMX1A-201ENST00000294816 GOLGA8KD6RF30 607 aa11.49□□□□□ -0.57
LMX1A-201ENST00000294816 SHOX2O60902 331 aaPredicted RBP11.49□□□□□ -0.57
LMX1A-201ENST00000294816 KIF5AQ12840 1032 aa11.49□□□□□ -0.57
LMX1A-201ENST00000294816 SWT1Q5T5J6 900 aaKnown RBP11.49□□□□□ -0.57
LMX1A-201ENST00000294816 MAGEB6Q8N7X4 407 aa11.49□□□□□ -0.57
LMX1A-201ENST00000294816 EHD2Q9NZN4 543 aa11.49□□□□□ -0.57
LMX1A-201ENST00000294816 RWDD2AQ9UIY3 292 aa11.49□□□□□ -0.57
LMX1A-201ENST00000294816 MAP3K15Q6ZN16 1313 aa11.49□□□□□ -0.57
LMX1A-201ENST00000294816 B4DLN1 442 aa11.49□□□□□ -0.57
LMX1A-201ENST00000294816 MCM7P33993 719 aa11.49□□□□□ -0.57
LMX1A-201ENST00000294816 NAP1L1P55209 391 aaKnown RBP11.49□□□□□ -0.57
LMX1A-201ENST00000294816 PTGDRQ13258 359 aa11.49□□□□□ -0.57
LMX1A-201ENST00000294816 AKNAD1Q5T1N1 836 aa11.49□□□□□ -0.57
LMX1A-201ENST00000294816 PAPD7Q5XG87 772 aaKnown RBP11.49□□□□□ -0.57
LMX1A-201ENST00000294816 EP400NLQ6ZTU2 488 aa11.49□□□□□ -0.57
LMX1A-201ENST00000294816 ZNF654Q8IZM8 581 aa11.49□□□□□ -0.57
LMX1A-201ENST00000294816 FANCBQ8NB91 859 aa11.49□□□□□ -0.57
LMX1A-201ENST00000294816 AGPAT5Q9NUQ2 364 aa11.49□□□□□ -0.57
LMX1A-201ENST00000294816 XDHP47989 1333 aa11.49□□□□□ -0.57
LMX1A-201ENST00000294816 FECHP22830 423 aa11.48□□□□□ -0.57
LMX1A-201ENST00000294816 PRCPP42785 496 aa11.48□□□□□ -0.57
LMX1A-201ENST00000294816 PHKA1P46020 1223 aa11.48□□□□□ -0.57
LMX1A-201ENST00000294816 ATP2B2Q01814 1243 aa11.48□□□□□ -0.57
LMX1A-201ENST00000294816 TCIRG1Q13488 830 aa11.48□□□□□ -0.57
LMX1A-201ENST00000294816 SPA17Q15506 151 aa11.48□□□□□ -0.57
LMX1A-201ENST00000294816 CT47A1Q5JQC4 288 aaPredicted RBP11.48□□□□□ -0.57
LMX1A-201ENST00000294816 TTC38Q5R3I4 469 aa11.48□□□□□ -0.57
LMX1A-201ENST00000294816 THEMISQ8N1K5 641 aaPredicted RBP11.48□□□□□ -0.57
LMX1A-201ENST00000294816 SYNE4Q8N205 404 aa11.48□□□□□ -0.57
LMX1A-201ENST00000294816 PIAS4Q8N2W9 510 aaPredicted RBP11.48□□□□□ -0.57
LMX1A-201ENST00000294816 MB21D1Q8N884 522 aa11.48□□□□□ -0.57
LMX1A-201ENST00000294816 CABS1Q96KC9 395 aa11.48□□□□□ -0.57
LMX1A-201ENST00000294816 KRT23Q9C075 422 aa11.48□□□□□ -0.57
LMX1A-201ENST00000294816 V9GY48 417 aaPredicted RBP11.48□□□□□ -0.57
LMX1A-201ENST00000294816 KLK7P49862 253 aa11.48□□□□□ -0.57
LMX1A-201ENST00000294816 B4GALNT4Q76KP1 1039 aa11.48□□□□□ -0.57
LMX1A-201ENST00000294816 KRT26Q7Z3Y9 468 aa11.48□□□□□ -0.57
LMX1A-201ENST00000294816 TSEN2Q8NCE0 465 aaKnown RBP11.48□□□□□ -0.57
LMX1A-201ENST00000294816 IFT81Q8WYA0 676 aa11.48□□□□□ -0.57
LMX1A-201ENST00000294816 STRBPQ96SI9 672 aaKnown RBP11.48□□□□□ -0.57
LMX1A-201ENST00000294816 EPB41L4AQ9HCS5 686 aaPredicted RBP11.48□□□□□ -0.57
LMX1A-201ENST00000294816 CD248Q9HCU0 757 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms