RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 QSER1Q2KHR3 1735 aa17.13■□□□□ 0.33
CCDC116-201ENST00000292779 ADKP55263 362 aaKnown RBP17.13■□□□□ 0.33
CCDC116-201ENST00000292779 GRAPQ13588 217 aa17.13■□□□□ 0.33
CCDC116-201ENST00000292779 NR1I3Q14994 352 aa17.13■□□□□ 0.33
CCDC116-201ENST00000292779 ELF2Q15723 593 aa17.13■□□□□ 0.33
CCDC116-201ENST00000292779 CCDC93Q567U6 631 aa17.13■□□□□ 0.33
CCDC116-201ENST00000292779 TRIM65Q6PJ69 517 aa17.13■□□□□ 0.33
CCDC116-201ENST00000292779 FCHSD1Q86WN1 690 aa17.13■□□□□ 0.33
CCDC116-201ENST00000292779 GRAPLQ8TC17 118 aaPredicted RBP17.13■□□□□ 0.33
CCDC116-201ENST00000292779 BAG1Q99933 345 aaPredicted RBP17.13■□□□□ 0.33
CCDC116-201ENST00000292779 ZMYND15Q9H091 742 aa17.13■□□□□ 0.33
CCDC116-201ENST00000292779 DNAI1Q9UI46 699 aa17.13■□□□□ 0.33
CCDC116-201ENST00000292779 SRCAPQ6ZRS2 3230 aa17.13■□□□□ 0.33
CCDC116-201ENST00000292779 LDHBP07195 334 aaKnown RBP17.12■□□□□ 0.33
CCDC116-201ENST00000292779 STX17P56962 302 aa17.12■□□□□ 0.33
CCDC116-201ENST00000292779 TFAP4Q01664 338 aa17.12■□□□□ 0.33
CCDC116-201ENST00000292779 SF3B2Q13435 895 aaKnown RBP17.12■□□□□ 0.33
CCDC116-201ENST00000292779 CUL4BQ13620 913 aa17.12■□□□□ 0.33
CCDC116-201ENST00000292779 SMAP1Q8IYB5 467 aaPredicted RBP17.12■□□□□ 0.33
CCDC116-201ENST00000292779 SMYD4Q8IYR2 804 aaPredicted RBP17.12■□□□□ 0.33
CCDC116-201ENST00000292779 STAMQ92783 540 aa17.12■□□□□ 0.33
CCDC116-201ENST00000292779 GPR101Q96P66 508 aaPredicted RBP17.12■□□□□ 0.33
CCDC116-201ENST00000292779 GSDMAQ96QA5 445 aa17.12■□□□□ 0.33
CCDC116-201ENST00000292779 MKRN1Q9UHC7 482 aaKnown RBP17.12■□□□□ 0.33
CCDC116-201ENST00000292779 PHLPP2Q6ZVD8 1323 aa17.12■□□□□ 0.33
CCDC116-201ENST00000292779 SYNRGQ9UMZ2 1314 aa17.12■□□□□ 0.33
CCDC116-201ENST00000292779 COL11A2P13942 1736 aaPredicted RBP17.12■□□□□ 0.33
CCDC116-201ENST00000292779 A0A1B0GTH6 734 aa17.12■□□□□ 0.33
CCDC116-201ENST00000292779 HMGB2P26583 209 aaKnown RBP17.12■□□□□ 0.33
CCDC116-201ENST00000292779 KIF5BP33176 963 aa17.12■□□□□ 0.33
CCDC116-201ENST00000292779 MCM7P33993 719 aa17.12■□□□□ 0.33
CCDC116-201ENST00000292779 DIXDC1Q155Q3 683 aa17.12■□□□□ 0.33
CCDC116-201ENST00000292779 GRIK5Q16478 980 aa17.12■□□□□ 0.33
CCDC116-201ENST00000292779 CT47A1Q5JQC4 288 aaPredicted RBP17.12■□□□□ 0.33
CCDC116-201ENST00000292779 C12orf60Q5U649 245 aa17.12■□□□□ 0.33
CCDC116-201ENST00000292779 SPATA1Q5VX52 437 aa17.12■□□□□ 0.33
CCDC116-201ENST00000292779 TMED8Q6PL24 325 aaPredicted RBP17.12■□□□□ 0.33
CCDC116-201ENST00000292779 FEZ1Q99689 392 aa17.12■□□□□ 0.33
CCDC116-201ENST00000292779 KAT14Q9H8E8 782 aa17.12■□□□□ 0.33
CCDC116-201ENST00000292779 PRDM10Q9NQV6 1147 aa17.12■□□□□ 0.33
CCDC116-201ENST00000292779 IL17RBQ9NRM6 502 aa17.12■□□□□ 0.33
CCDC116-201ENST00000292779 STK32BQ9NY57 414 aa17.12■□□□□ 0.33
CCDC116-201ENST00000292779 ZSCAN12O43309 604 aa17.11■□□□□ 0.33
CCDC116-201ENST00000292779 USP5P45974 858 aa17.11■□□□□ 0.33
CCDC116-201ENST00000292779 TRAPPC10P48553 1259 aa17.11■□□□□ 0.33
CCDC116-201ENST00000292779 IL17AQ16552 155 aa17.11■□□□□ 0.33
CCDC116-201ENST00000292779 APTXQ7Z2E3 356 aaKnown RBP17.11■□□□□ 0.33
CCDC116-201ENST00000292779 NLGN1Q8N2Q7 840 aa17.11■□□□□ 0.33
CCDC116-201ENST00000292779 LRRN4CLQ8ND94 238 aa17.11■□□□□ 0.33
CCDC116-201ENST00000292779 WDR66Q8TBY9 1149 aa17.11■□□□□ 0.33
CCDC116-201ENST00000292779 SH3RF3Q8TEJ3 882 aaPredicted RBP17.11■□□□□ 0.33
CCDC116-201ENST00000292779 DYNLL2Q96FJ2 89 aa17.11■□□□□ 0.33
CCDC116-201ENST00000292779 PPP2R2CQ9Y2T4 447 aa17.11■□□□□ 0.33
CCDC116-201ENST00000292779 LEMD3Q9Y2U8 911 aa17.11■□□□□ 0.33
CCDC116-201ENST00000292779 XDHP47989 1333 aa17.11■□□□□ 0.33
CCDC116-201ENST00000292779 E2F4Q16254 413 aa17.1■□□□□ 0.33
CCDC116-201ENST00000292779 ZNF397Q8NF99 534 aaPredicted RBP17.1■□□□□ 0.33
CCDC116-201ENST00000292779 PPP1R3GB7ZBB8 358 aa17.1■□□□□ 0.33
CCDC116-201ENST00000292779 FANCGO15287 622 aa17.1■□□□□ 0.33
CCDC116-201ENST00000292779 TEX33O43247 280 aa17.1■□□□□ 0.33
CCDC116-201ENST00000292779 STX10O60499 249 aa17.1■□□□□ 0.33
CCDC116-201ENST00000292779 KMT5BQ4FZB7 885 aa17.1■□□□□ 0.33
CCDC116-201ENST00000292779 STAG2Q8N3U4 1231 aa17.1■□□□□ 0.33
CCDC116-201ENST00000292779 PNMA1Q8ND90 353 aa17.1■□□□□ 0.33
CCDC116-201ENST00000292779 GPKOWQ92917 476 aaPredicted RBP eCLIP17.1■□□□□ 0.33
CCDC116-201ENST00000292779 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.1■□□□□ 0.332e-6■■■■□ 25.1
CCDC116-201ENST00000292779 ZBTB22O15209 634 aa17.09■□□□□ 0.33
CCDC116-201ENST00000292779 CRY2Q49AN0 593 aa17.09■□□□□ 0.33
CCDC116-201ENST00000292779 DGKHQ86XP1 1220 aa17.09■□□□□ 0.33
CCDC116-201ENST00000292779 IQUBQ8NA54 791 aa17.09■□□□□ 0.33
CCDC116-201ENST00000292779 BLZF1Q9H2G9 400 aa17.09■□□□□ 0.33
CCDC116-201ENST00000292779 CALML3P27482 149 aa17.09■□□□□ 0.33
CCDC116-201ENST00000292779 CDKAL1Q5VV42 579 aa17.09■□□□□ 0.33
CCDC116-201ENST00000292779 PDXDC2PQ6P474 469 aa17.09■□□□□ 0.33
CCDC116-201ENST00000292779 TOGARAM2Q6ZUX3 1019 aa17.09■□□□□ 0.33
CCDC116-201ENST00000292779 BLIDQ8IZY5 108 aa17.09■□□□□ 0.33
CCDC116-201ENST00000292779 FLAD1Q8NFF5 587 aa17.09■□□□□ 0.33
CCDC116-201ENST00000292779 FAM205AQ6ZU69 1335 aa17.08■□□□□ 0.33
CCDC116-201ENST00000292779 NAV1Q8NEY1 1877 aa17.08■□□□□ 0.33
CCDC116-201ENST00000292779 ERCC6LQ2NKX8 1250 aa17.08■□□□□ 0.33
CCDC116-201ENST00000292779 FBXO38Q6PIJ6 1188 aa17.08■□□□□ 0.33
CCDC116-201ENST00000292779 ZNF804AQ7Z570 1209 aa17.08■□□□□ 0.33
CCDC116-201ENST00000292779 TGFBRAP1Q8WUH2 860 aa17.08■□□□□ 0.33
CCDC116-201ENST00000292779 MKNK2Q9HBH9 465 aa17.08■□□□□ 0.33
CCDC116-201ENST00000292779 OGFRQ9NZT2 677 aa17.08■□□□□ 0.33
CCDC116-201ENST00000292779 USP17L3A6NCW0 530 aa17.08■□□□□ 0.32
CCDC116-201ENST00000292779 USP17L4A6NCW7 530 aa17.08■□□□□ 0.32
CCDC116-201ENST00000292779 ST5P78524 1137 aa17.08■□□□□ 0.32
CCDC116-201ENST00000292779 USP17L1Q7RTZ2 530 aa17.08■□□□□ 0.32
CCDC116-201ENST00000292779 FAM177A1Q8N128 213 aaPredicted RBP17.08■□□□□ 0.32
CCDC116-201ENST00000292779 MTRQ99707 1265 aa17.08■□□□□ 0.32
CCDC116-201ENST00000292779 CTNND2Q9UQB3 1225 aa17.08■□□□□ 0.32
CCDC116-201ENST00000292779 GRM4Q14833 912 aa17.07■□□□□ 0.32
CCDC116-201ENST00000292779 C4orf32Q8N8J7 132 aa17.07■□□□□ 0.32
CCDC116-201ENST00000292779 RASGRP4Q8TDF6 673 aa17.07■□□□□ 0.32
CCDC116-201ENST00000292779 ANKS1AQ92625 1134 aa17.07■□□□□ 0.32
CCDC116-201ENST00000292779 SH3GLB2Q9NR46 395 aa17.07■□□□□ 0.32
CCDC116-201ENST00000292779 ADD3Q9UEY8 706 aaKnown RBP17.07■□□□□ 0.32
CCDC116-201ENST00000292779 MAD2L2Q9UI95 211 aa17.07■□□□□ 0.32
CCDC116-201ENST00000292779 DDX41Q9UJV9 622 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms