RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 STK10O94804 968 aaKnown RBP14.16□□□□□ -0.14
PTCD1-201ENST00000292478 PPFIA1Q13136 1202 aa14.16□□□□□ -0.14
PTCD1-201ENST00000292478 USH1GQ495M9 461 aa14.16□□□□□ -0.14
PTCD1-201ENST00000292478 GABPB2Q8TAK5 448 aaPredicted RBP14.16□□□□□ -0.14
PTCD1-201ENST00000292478 GAS7O60861 476 aa14.16□□□□□ -0.14
PTCD1-201ENST00000292478 PEX26Q7Z412 305 aa14.16□□□□□ -0.14
PTCD1-201ENST00000292478 POLR3EQ9NVU0 708 aa14.16□□□□□ -0.14
PTCD1-201ENST00000292478 KLRF2D3W0D1 207 aa14.15□□□□□ -0.14
PTCD1-201ENST00000292478 SLC39A14Q15043 492 aa14.15□□□□□ -0.14
PTCD1-201ENST00000292478 RRAGAQ7L523 313 aa14.15□□□□□ -0.14
PTCD1-201ENST00000292478 NELFCDQ8IXH7 590 aa14.15□□□□□ -0.14
PTCD1-201ENST00000292478 METTL14Q9HCE5 456 aaKnown RBP14.15□□□□□ -0.14
PTCD1-201ENST00000292478 SAR1BQ9Y6B6 198 aa14.15□□□□□ -0.14
PTCD1-201ENST00000292478 FOSP01100 380 aaPredicted RBP14.15□□□□□ -0.14
PTCD1-201ENST00000292478 HARSP12081 509 aaKnown RBP14.15□□□□□ -0.14
PTCD1-201ENST00000292478 GPT2Q8TD30 523 aa14.15□□□□□ -0.14
PTCD1-201ENST00000292478 GREM2Q9H772 168 aa14.15□□□□□ -0.14
PTCD1-201ENST00000292478 NCAPD2Q15021 1401 aa14.15□□□□□ -0.14
PTCD1-201ENST00000292478 GOLGA6BA6NDN3 693 aa14.15□□□□□ -0.14
PTCD1-201ENST00000292478 hCG_1984214I3L0E3 225 aa14.15□□□□□ -0.14
PTCD1-201ENST00000292478 FMNL1O95466 1100 aaPredicted RBP14.15□□□□□ -0.14
PTCD1-201ENST00000292478 XRCC5P13010 732 aaKnown RBP14.15□□□□□ -0.14
PTCD1-201ENST00000292478 GPBP1Q86WP2 473 aa14.15□□□□□ -0.14
PTCD1-201ENST00000292478 ZNF713Q8N859 430 aaPredicted RBP14.15□□□□□ -0.14
PTCD1-201ENST00000292478 RAB17Q9H0T7 212 aa14.15□□□□□ -0.14
PTCD1-201ENST00000292478 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.15□□□□□ -0.14
PTCD1-201ENST00000292478 DNAJC21Q5F1R6 531 aaKnown RBP14.15□□□□□ -0.14
PTCD1-201ENST00000292478 INTS8Q75QN2 995 aaKnown RBP14.15□□□□□ -0.14
PTCD1-201ENST00000292478 PCDHA12Q9UN75 941 aa14.15□□□□□ -0.14
PTCD1-201ENST00000292478 ROBO2Q9HCK4 1378 aa14.15□□□□□ -0.14
PTCD1-201ENST00000292478 PLA2R1Q13018 1463 aa14.15□□□□□ -0.14
PTCD1-201ENST00000292478 ADGRL3Q9HAR2 1447 aa14.15□□□□□ -0.14
PTCD1-201ENST00000292478 KAT6BQ8WYB5 2073 aa14.15□□□□□ -0.14
PTCD1-201ENST00000292478 hCG_1642624A0A1W2PR95 340 aa14.15□□□□□ -0.15
PTCD1-201ENST00000292478 MIER3Q7Z3K6 550 aa14.15□□□□□ -0.15
PTCD1-201ENST00000292478 RAB3IL1Q8TBN0 382 aa14.15□□□□□ -0.15
PTCD1-201ENST00000292478 IQGAP3Q86VI3 1631 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 ERVV-1B6SEH8 477 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 TRIM37O94972 964 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 TTC31Q49AM3 519 aaPredicted RBP14.14□□□□□ -0.15
PTCD1-201ENST00000292478 FYB2Q5VWT5 728 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 MCF2L2Q86YR7 1114 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 TDRD7Q8NHU6 1098 aaKnown RBP14.14□□□□□ -0.15
PTCD1-201ENST00000292478 KIFC2Q96AC6 838 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 CCDC17Q96LX7 622 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 GSDMAQ96QA5 445 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 HAUS4Q9H6D7 363 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 ZCCHC11Q5TAX3 1644 aaKnown RBP14.14□□□□□ -0.15
PTCD1-201ENST00000292478 ZNF804BA4D1E1 1349 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 PSDA5PKW4 1024 aaPredicted RBP14.14□□□□□ -0.15
PTCD1-201ENST00000292478 STAT1P42224 750 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 TCP10Q12799 353 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 GNPTABQ3T906 1256 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 KRT26Q7Z3Y9 468 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 CCDC110Q8TBZ0 833 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.14□□□□□ -0.15
PTCD1-201ENST00000292478 SDR42E1Q8WUS8 393 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 TBC1D7Q9P0N9 293 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 STIM2Q9P246 746 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 IVNS1ABPQ9Y6Y0 642 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 TMEM94Q12767 1356 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 LOC102724428A0A0B4J2F2 783 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 SIK1P57059 783 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 LACTBP83111 547 aaPredicted RBP14.14□□□□□ -0.15
PTCD1-201ENST00000292478 POLA2Q14181 598 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 CFAP157Q5JU67 520 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 LSM14BQ9BX40 385 aaKnown RBP14.14□□□□□ -0.15
PTCD1-201ENST00000292478 AMFRQ9UKV5 643 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 E7EVH7 732 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 RPN1P04843 607 aaKnown RBP14.14□□□□□ -0.15
PTCD1-201ENST00000292478 BTDP43251 543 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 AK8Q96MA6 479 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 XDHP47989 1333 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 WDR17Q8IZU2 1322 aa14.14□□□□□ -0.15
PTCD1-201ENST00000292478 BTBD18B2RXH4 712 aa14.13□□□□□ -0.15
PTCD1-201ENST00000292478 POLR2MP0CAP2 368 aa14.13□□□□□ -0.15
PTCD1-201ENST00000292478 ZYXQ15942 572 aaKnown RBP14.13□□□□□ -0.15
PTCD1-201ENST00000292478 TYW1BQ6NUM6 668 aa14.13□□□□□ -0.15
PTCD1-201ENST00000292478 NSMFQ6X4W1 530 aa14.13□□□□□ -0.15
PTCD1-201ENST00000292478 LRRC8AQ8IWT6 810 aa14.13□□□□□ -0.15
PTCD1-201ENST00000292478 ARHGAP31Q2M1Z3 1444 aa14.13□□□□□ -0.15
PTCD1-201ENST00000292478 P4HA1P13674 534 aa14.13□□□□□ -0.15
PTCD1-201ENST00000292478 PHKA1P46020 1223 aa14.13□□□□□ -0.15
PTCD1-201ENST00000292478 PROSER3Q2NL68 480 aa14.13□□□□□ -0.15
PTCD1-201ENST00000292478 MAP7D1Q3KQU3 841 aa14.13□□□□□ -0.15
PTCD1-201ENST00000292478 POTEDQ86YR6 584 aa14.13□□□□□ -0.15
PTCD1-201ENST00000292478 C2CD5Q86YS7 1000 aa14.13□□□□□ -0.15
PTCD1-201ENST00000292478 TPH2Q8IWU9 490 aa14.13□□□□□ -0.15
PTCD1-201ENST00000292478 STAMQ92783 540 aa14.13□□□□□ -0.15
PTCD1-201ENST00000292478 DDX39AO00148 427 aaKnown RBP14.13□□□□□ -0.15
PTCD1-201ENST00000292478 PPIP5K2O43314 1243 aa14.13□□□□□ -0.15
PTCD1-201ENST00000292478 ADD2P35612 726 aa14.13□□□□□ -0.15
PTCD1-201ENST00000292478 NDUFA8P51970 172 aa14.13□□□□□ -0.15
PTCD1-201ENST00000292478 DAAM2Q86T65 1068 aa14.13□□□□□ -0.15
PTCD1-201ENST00000292478 RASEFQ8IZ41 740 aa14.13□□□□□ -0.15
PTCD1-201ENST00000292478 FAM207AQ9NSI2 230 aaPredicted RBP14.13□□□□□ -0.15
PTCD1-201ENST00000292478 HYOU1Q9Y4L1 999 aa14.13□□□□□ -0.15
PTCD1-201ENST00000292478 CARMIL3Q8ND23 1372 aa14.13□□□□□ -0.15
PTCD1-201ENST00000292478 RPAP1Q9BWH6 1393 aaPredicted RBP14.13□□□□□ -0.15
PTCD1-201ENST00000292478 IKBKBO14920 756 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 192.2 ms