RNA–Protein interactions for RNA: ENST00000292314.6

CCDC12-201, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5 BASIC

Gene CCDC12, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-201ENST00000292314 IKQ13123 557 aaPredicted RBP18.82■□□□□ 0.6
CCDC12-201ENST00000292314 ZYXQ15942 572 aaKnown RBP18.82■□□□□ 0.6
CCDC12-201ENST00000292314 LDLRAD1Q5T700 205 aa18.82■□□□□ 0.6
CCDC12-201ENST00000292314 SIAH1Q8IUQ4 282 aa18.82■□□□□ 0.6
CCDC12-201ENST00000292314 FAM184AQ8NB25 1140 aa18.82■□□□□ 0.6
CCDC12-201ENST00000292314 ZNF784Q8NCA9 323 aaPredicted RBP18.82■□□□□ 0.6
CCDC12-201ENST00000292314 SPRYD3Q8NCJ5 442 aa18.82■□□□□ 0.6
CCDC12-201ENST00000292314 WASF1Q92558 559 aa18.82■□□□□ 0.6
CCDC12-201ENST00000292314 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.82■□□□□ 0.6
CCDC12-201ENST00000292314 A0A1W2PRG0 241 aa18.81■□□□□ 0.6
CCDC12-201ENST00000292314 PTPDC1A2A3K4 754 aa18.81■□□□□ 0.6
CCDC12-201ENST00000292314 KLRF2D3W0D1 207 aa18.81■□□□□ 0.6
CCDC12-201ENST00000292314 SNHG28P0DPA3 235 aa18.81■□□□□ 0.6
CCDC12-201ENST00000292314 BMP3P12645 472 aa18.81■□□□□ 0.6
CCDC12-201ENST00000292314 IFNAR1P17181 557 aa18.81■□□□□ 0.6
CCDC12-201ENST00000292314 SLC4A3P48751 1232 aa18.81■□□□□ 0.6
CCDC12-201ENST00000292314 SSRP1Q08945 709 aaKnown RBP18.81■□□□□ 0.6
CCDC12-201ENST00000292314 ZNF543Q08ER8 600 aa18.81■□□□□ 0.6
CCDC12-201ENST00000292314 PPIL2Q13356 520 aa18.81■□□□□ 0.6
CCDC12-201ENST00000292314 MTMR2Q13614 643 aa18.81■□□□□ 0.6
CCDC12-201ENST00000292314 TMTC3Q6ZXV5 915 aa18.81■□□□□ 0.6
CCDC12-201ENST00000292314 MOB2Q70IA6 237 aa18.81■□□□□ 0.6
CCDC12-201ENST00000292314 CCDC84Q86UT8 332 aaPredicted RBP18.81■□□□□ 0.6
CCDC12-201ENST00000292314 OTUD5Q96G74 571 aa18.81■□□□□ 0.6
CCDC12-201ENST00000292314 PALM3A6NDB9 673 aaPredicted RBP18.8■□□□□ 0.6
CCDC12-201ENST00000292314 WDR46O15213 610 aaKnown RBP18.8■□□□□ 0.6
CCDC12-201ENST00000292314 PDCP20941 246 aa18.8■□□□□ 0.6
CCDC12-201ENST00000292314 SMARCA1P28370 1054 aa18.8■□□□□ 0.6
CCDC12-201ENST00000292314 CDC27P30260 824 aa18.8■□□□□ 0.6
CCDC12-201ENST00000292314 ADD1P35611 737 aaKnown RBP18.8■□□□□ 0.6
CCDC12-201ENST00000292314 FMR1Q06787 632 aaKnown RBP eCLIP18.8■□□□□ 0.6
CCDC12-201ENST00000292314 OPTNQ96CV9 577 aa18.8■□□□□ 0.6
CCDC12-201ENST00000292314 CLMNQ96JQ2 1002 aa18.8■□□□□ 0.6
CCDC12-201ENST00000292314 GPCPD1Q9NPB8 672 aa18.8■□□□□ 0.6
CCDC12-201ENST00000292314 MAD2L2Q9UI95 211 aa18.8■□□□□ 0.6
CCDC12-201ENST00000292314 AFG3L2Q9Y4W6 797 aa18.8■□□□□ 0.6
CCDC12-201ENST00000292314 PHIPQ8WWQ0 1821 aa18.79■□□□□ 0.6
CCDC12-201ENST00000292314 FRMPD2Q68DX3 1309 aaPredicted RBP18.79■□□□□ 0.6
CCDC12-201ENST00000292314 PASKQ96RG2 1323 aa18.79■□□□□ 0.6
CCDC12-201ENST00000292314 STK36Q9NRP7 1315 aa18.79■□□□□ 0.6
CCDC12-201ENST00000292314 CXCL11O14625 94 aa18.79■□□□□ 0.6
CCDC12-201ENST00000292314 PDIA4P13667 645 aaKnown RBP18.79■□□□□ 0.6
CCDC12-201ENST00000292314 HUNKP57058 714 aa18.79■□□□□ 0.6
CCDC12-201ENST00000292314 SPICE1Q8N0Z3 855 aa18.79■□□□□ 0.6
CCDC12-201ENST00000292314 NSUN7Q8NE18 718 aaKnown RBP18.79■□□□□ 0.6
CCDC12-201ENST00000292314 CHURC1Q8WUH1 139 aa18.79■□□□□ 0.6
CCDC12-201ENST00000292314 SPZ1Q9BXG8 430 aa18.79■□□□□ 0.6
CCDC12-201ENST00000292314 SLC26A6Q9BXS9 759 aa18.79■□□□□ 0.6
CCDC12-201ENST00000292314 RNF26Q9BY78 433 aaPredicted RBP18.79■□□□□ 0.6
CCDC12-201ENST00000292314 SEC63Q9UGP8 760 aaKnown RBP18.79■□□□□ 0.6
CCDC12-201ENST00000292314 FMNL1O95466 1100 aaPredicted RBP18.78■□□□□ 0.6
CCDC12-201ENST00000292314 GOLGA8HP0CJ92 632 aa18.78■□□□□ 0.6
CCDC12-201ENST00000292314 GJB2P29033 226 aa18.78■□□□□ 0.6
CCDC12-201ENST00000292314 STAT2P52630 851 aa18.78■□□□□ 0.6
CCDC12-201ENST00000292314 KCTD1Q719H9 257 aa18.78■□□□□ 0.6
CCDC12-201ENST00000292314 FAM160B2Q86V87 743 aa18.78■□□□□ 0.6
CCDC12-201ENST00000292314 RRP36Q96EU6 259 aaKnown RBP18.78■□□□□ 0.6
CCDC12-201ENST00000292314 C12orf42Q96LP6 360 aa18.78■□□□□ 0.6
CCDC12-201ENST00000292314 FAM217BQ9NTX9 383 aaPredicted RBP18.78■□□□□ 0.6
CCDC12-201ENST00000292314 ORC3Q9UBD5 711 aaPredicted RBP18.78■□□□□ 0.6
CCDC12-201ENST00000292314 FEM1BQ9UK73 627 aa18.78■□□□□ 0.6
CCDC12-201ENST00000292314 MYH6P13533 1939 aa18.77■□□□□ 0.6
CCDC12-201ENST00000292314 PLEKHA8P1O95397 391 aa18.77■□□□□ 0.6
CCDC12-201ENST00000292314 DEXIO95424 95 aa18.77■□□□□ 0.6
CCDC12-201ENST00000292314 XBP1P17861 261 aa18.77■□□□□ 0.6
CCDC12-201ENST00000292314 HMGCS2P54868 508 aa18.77■□□□□ 0.6
CCDC12-201ENST00000292314 ST3GAL1Q11201 340 aa18.77■□□□□ 0.6
CCDC12-201ENST00000292314 SNAPC2Q13487 334 aa18.77■□□□□ 0.6
CCDC12-201ENST00000292314 FAM83BQ5T0W9 1011 aa18.77■□□□□ 0.6
CCDC12-201ENST00000292314 CST9Q5W186 159 aa18.77■□□□□ 0.6
CCDC12-201ENST00000292314 FASTKD5Q7L8L6 764 aaKnown RBP18.77■□□□□ 0.6
CCDC12-201ENST00000292314 STAG2Q8N3U4 1231 aa18.77■□□□□ 0.6
CCDC12-201ENST00000292314 CCDC82Q8N4S0 544 aa18.77■□□□□ 0.6
CCDC12-201ENST00000292314 SMARCC2Q8TAQ2 1214 aa18.77■□□□□ 0.6
CCDC12-201ENST00000292314 DDX11Q96FC9 970 aa18.77■□□□□ 0.6
CCDC12-201ENST00000292314 TANGO6Q9C0B7 1094 aa18.77■□□□□ 0.6
CCDC12-201ENST00000292314 TMEM88BA6NKF7 163 aa18.76■□□□□ 0.59
CCDC12-201ENST00000292314 TMEM232C9JQI7 657 aa18.76■□□□□ 0.59
CCDC12-201ENST00000292314 VCAM1P19320 739 aa18.76■□□□□ 0.59
CCDC12-201ENST00000292314 PABPC4Q13310 644 aaKnown RBP eCLIP18.76■□□□□ 0.59
CCDC12-201ENST00000292314 TRIM29Q14134 588 aa18.76■□□□□ 0.59
CCDC12-201ENST00000292314 NTRK3Q16288 839 aa18.76■□□□□ 0.59
CCDC12-201ENST00000292314 SH3D19Q5HYK7 790 aa18.76■□□□□ 0.59
CCDC12-201ENST00000292314 PROCA1Q8NCQ7 364 aaPredicted RBP18.76■□□□□ 0.59
CCDC12-201ENST00000292314 PHKBQ93100 1093 aa18.76■□□□□ 0.59
CCDC12-201ENST00000292314 ABT1Q9ULW3 272 aaKnown RBP18.76■□□□□ 0.59
CCDC12-201ENST00000292314 CTDP1Q9Y5B0 961 aaPredicted RBP18.76■□□□□ 0.59
CCDC12-201ENST00000292314 CNTNAP5Q8WYK1 1306 aa18.75■□□□□ 0.59
CCDC12-201ENST00000292314 PRPF3O43395 683 aaKnown RBP18.75■□□□□ 0.59
CCDC12-201ENST00000292314 JAK2O60674 1132 aa18.75■□□□□ 0.59
CCDC12-201ENST00000292314 PLA2G6O60733 806 aa18.75■□□□□ 0.59
CCDC12-201ENST00000292314 CTDNEP1O95476 244 aa18.75■□□□□ 0.59
CCDC12-201ENST00000292314 ZBTB48P10074 688 aaPredicted RBP18.75■□□□□ 0.59
CCDC12-201ENST00000292314 TRAF1Q13077 416 aa18.75■□□□□ 0.59
CCDC12-201ENST00000292314 SYDE2Q5VT97 1194 aa18.75■□□□□ 0.59
CCDC12-201ENST00000292314 GADL1Q6ZQY3 521 aa18.75■□□□□ 0.59
CCDC12-201ENST00000292314 SRBD1Q8N5C6 995 aaKnown RBP18.75■□□□□ 0.59
CCDC12-201ENST00000292314 WNK4Q96J92 1243 aa18.75■□□□□ 0.59
CCDC12-201ENST00000292314 NUP88Q99567 741 aaPredicted RBP18.75■□□□□ 0.59
CCDC12-201ENST00000292314 KCNH4Q9UQ05 1017 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms