RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 HOXA7P31268 230 aaPredicted RBP11.67□□□□□ -0.54
CCDC58-201ENST00000291458 ERVK-9P63128 1117 aa11.67□□□□□ -0.54
CCDC58-201ENST00000291458 ERVK-24P63145 666 aa11.67□□□□□ -0.54
CCDC58-201ENST00000291458 CHD1LQ86WJ1 897 aa11.67□□□□□ -0.54
CCDC58-201ENST00000291458 SMC5Q8IY18 1101 aa11.67□□□□□ -0.54
CCDC58-201ENST00000291458 GPRC5AQ8NFJ5 357 aa11.67□□□□□ -0.54
CCDC58-201ENST00000291458 EVI5LQ96CN4 794 aa11.67□□□□□ -0.54
CCDC58-201ENST00000291458 C12orf42Q96LP6 360 aa11.67□□□□□ -0.54
CCDC58-201ENST00000291458 FAM227BQ96M60 508 aa11.67□□□□□ -0.54
CCDC58-201ENST00000291458 UNC93B1Q9H1C4 597 aa11.67□□□□□ -0.54
CCDC58-201ENST00000291458 PORCNQ9H237 461 aa11.67□□□□□ -0.54
CCDC58-201ENST00000291458 MKNK2Q9HBH9 465 aa11.67□□□□□ -0.54
CCDC58-201ENST00000291458 ROBO3Q96MS0 1386 aa11.67□□□□□ -0.54
CCDC58-201ENST00000291458 RLFQ13129 1914 aa11.66□□□□□ -0.54
CCDC58-201ENST00000291458 SPDYE16A6NNV3 312 aaPredicted RBP11.66□□□□□ -0.54
CCDC58-201ENST00000291458 EEF2P13639 858 aaKnown RBP11.66□□□□□ -0.54
CCDC58-201ENST00000291458 RASA1P20936 1047 aa11.66□□□□□ -0.54
CCDC58-201ENST00000291458 UBXN2AP68543 259 aa11.66□□□□□ -0.54
CCDC58-201ENST00000291458 CTDSPL2Q05D32 466 aa11.66□□□□□ -0.54
CCDC58-201ENST00000291458 NMIQ13287 307 aaPredicted RBP11.66□□□□□ -0.54
CCDC58-201ENST00000291458 PLS1Q14651 629 aa11.66□□□□□ -0.54
CCDC58-201ENST00000291458 Q3C1V9 767 aa11.66□□□□□ -0.54
CCDC58-201ENST00000291458 VPS53Q5VIR6 699 aa11.66□□□□□ -0.54
CCDC58-201ENST00000291458 POTEEQ6S8J3 1075 aa11.66□□□□□ -0.54
CCDC58-201ENST00000291458 CATSPERGQ6ZRH7 1159 aa11.66□□□□□ -0.54
CCDC58-201ENST00000291458 IFNL3Q8IZI9 196 aa11.66□□□□□ -0.54
CCDC58-201ENST00000291458 NACAP1Q9BZK3 213 aa11.66□□□□□ -0.54
CCDC58-201ENST00000291458 RNF208Q9H0X6 261 aa11.66□□□□□ -0.54
CCDC58-201ENST00000291458 RBPJLQ9UBG7 517 aa11.66□□□□□ -0.54
CCDC58-201ENST00000291458 STAP2Q9UGK3 403 aa11.66□□□□□ -0.54
CCDC58-201ENST00000291458 PATL2C9JE40 543 aaKnown RBP11.65□□□□□ -0.54
CCDC58-201ENST00000291458 CNMDO75829 334 aa11.65□□□□□ -0.54
CCDC58-201ENST00000291458 FLOT1O75955 427 aa11.65□□□□□ -0.54
CCDC58-201ENST00000291458 NUCB1Q02818 461 aa11.65□□□□□ -0.54
CCDC58-201ENST00000291458 PPARAQ07869 468 aa11.65□□□□□ -0.54
CCDC58-201ENST00000291458 TRIM32Q13049 653 aa11.65□□□□□ -0.54
CCDC58-201ENST00000291458 AAMPQ13685 434 aa11.65□□□□□ -0.54
CCDC58-201ENST00000291458 FAM47AQ5JRC9 791 aa11.65□□□□□ -0.54
CCDC58-201ENST00000291458 GPR142Q7Z601 462 aa11.65□□□□□ -0.54
CCDC58-201ENST00000291458 PLEKHM2Q8IWE5 1019 aa11.65□□□□□ -0.54
CCDC58-201ENST00000291458 LRRC47Q8N1G4 583 aaKnown RBP11.65□□□□□ -0.54
CCDC58-201ENST00000291458 CCDC17Q96LX7 622 aa11.65□□□□□ -0.54
CCDC58-201ENST00000291458 NUP88Q99567 741 aaPredicted RBP11.65□□□□□ -0.54
CCDC58-201ENST00000291458 SH2D4AQ9H788 454 aa11.65□□□□□ -0.54
CCDC58-201ENST00000291458 BTBD7Q9P203 1132 aa11.65□□□□□ -0.54
CCDC58-201ENST00000291458 MORF4L1Q9UBU8 362 aa11.65□□□□□ -0.54
CCDC58-201ENST00000291458 HTTP42858 3142 aa11.64□□□□□ -0.55
CCDC58-201ENST00000291458 SBK1Q52WX2 424 aa11.64□□□□□ -0.55
CCDC58-201ENST00000291458 FAM83BQ5T0W9 1011 aa11.64□□□□□ -0.55
CCDC58-201ENST00000291458 GIMAP6Q6P9H5 292 aa11.64□□□□□ -0.55
CCDC58-201ENST00000291458 ZNF589Q86UQ0 364 aaPredicted RBP11.64□□□□□ -0.55
CCDC58-201ENST00000291458 SIAH1Q8IUQ4 282 aa11.64□□□□□ -0.55
CCDC58-201ENST00000291458 GTF3C2Q8WUA4 911 aaPredicted RBP11.64□□□□□ -0.55
CCDC58-201ENST00000291458 SHISA4Q96DD7 197 aa11.64□□□□□ -0.55
CCDC58-201ENST00000291458 ATG4CQ96DT6 458 aa11.64□□□□□ -0.55
CCDC58-201ENST00000291458 VCPKMTQ9H867 229 aa11.64□□□□□ -0.55
CCDC58-201ENST00000291458 GOPCQ9HD26 462 aa11.64□□□□□ -0.55
CCDC58-201ENST00000291458 TOMM22Q9NS69 142 aa11.64□□□□□ -0.55
CCDC58-201ENST00000291458 FBXO28Q9NVF7 368 aa11.64□□□□□ -0.55
CCDC58-201ENST00000291458 MTMR7Q9Y216 660 aa11.64□□□□□ -0.55
CCDC58-201ENST00000291458 FOXP2O15409 715 aa11.63□□□□□ -0.55
CCDC58-201ENST00000291458 SLC34A2O95436 690 aa11.63□□□□□ -0.55
CCDC58-201ENST00000291458 TSPY3P0CV98 308 aa11.63□□□□□ -0.55
CCDC58-201ENST00000291458 TSPY8P0CW00 308 aa11.63□□□□□ -0.55
CCDC58-201ENST00000291458 MAPK4P31152 587 aa11.63□□□□□ -0.55
CCDC58-201ENST00000291458 HAND2P61296 217 aa11.63□□□□□ -0.55
CCDC58-201ENST00000291458 CCL14Q16627 93 aa11.63□□□□□ -0.55
CCDC58-201ENST00000291458 RRP12Q5JTH9 1297 aaKnown RBP11.63□□□□□ -0.55
CCDC58-201ENST00000291458 PLEKHH3Q7Z736 793 aa11.63□□□□□ -0.55
CCDC58-201ENST00000291458 ZNF444Q8N0Y2 327 aaPredicted RBP11.63□□□□□ -0.55
CCDC58-201ENST00000291458 TRIB2Q92519 343 aa11.63□□□□□ -0.55
CCDC58-201ENST00000291458 NUDT12Q9BQG2 462 aa11.63□□□□□ -0.55
CCDC58-201ENST00000291458 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.63□□□□□ -0.55
CCDC58-201ENST00000291458 KANSL2Q9H9L4 492 aa11.63□□□□□ -0.55
CCDC58-201ENST00000291458 INCENPQ9NQS7 918 aa11.63□□□□□ -0.55
CCDC58-201ENST00000291458 TMX2Q9Y320 296 aa11.63□□□□□ -0.55
CCDC58-201ENST00000291458 RABGAP1Q9Y3P9 1069 aa11.63□□□□□ -0.55
CCDC58-201ENST00000291458 PDE4DIPQ5VU43 2346 aa11.63□□□□□ -0.55
CCDC58-201ENST00000291458 LAMA4Q16363 1823 aa11.63□□□□□ -0.55
CCDC58-201ENST00000291458 WDR46O15213 610 aaKnown RBP11.62□□□□□ -0.55
CCDC58-201ENST00000291458 HMGCRP04035 888 aa11.62□□□□□ -0.55
CCDC58-201ENST00000291458 SLC3A2P08195 630 aaKnown RBP11.62□□□□□ -0.55
CCDC58-201ENST00000291458 HOXB3P14651 431 aaPredicted RBP11.62□□□□□ -0.55
CCDC58-201ENST00000291458 ZKSCAN1P17029 563 aaPredicted RBP11.62□□□□□ -0.55
CCDC58-201ENST00000291458 SLC4A3P48751 1232 aa11.62□□□□□ -0.55
CCDC58-201ENST00000291458 CCNA1P78396 465 aa11.62□□□□□ -0.55
CCDC58-201ENST00000291458 PDE4BQ07343 736 aa11.62□□□□□ -0.55
CCDC58-201ENST00000291458 IRF5Q13568 498 aa11.62□□□□□ -0.55
CCDC58-201ENST00000291458 SOCS4Q8WXH5 440 aa11.62□□□□□ -0.55
CCDC58-201ENST00000291458 LPAR1Q92633 364 aa11.62□□□□□ -0.55
CCDC58-201ENST00000291458 CEP95Q96GE4 821 aa11.62□□□□□ -0.55
CCDC58-201ENST00000291458 DEFB118Q96PH6 123 aa11.62□□□□□ -0.55
CCDC58-201ENST00000291458 DIAPH3Q9NSV4 1193 aa11.62□□□□□ -0.55
CCDC58-201ENST00000291458 CLIP2Q9UDT6 1046 aa11.62□□□□□ -0.55
CCDC58-201ENST00000291458 IVNS1ABPQ9Y6Y0 642 aa11.62□□□□□ -0.55
CCDC58-201ENST00000291458 FRMPD3Q5JV73 1810 aa11.62□□□□□ -0.55
CCDC58-201ENST00000291458 CCDC171Q6TFL3 1326 aa11.61□□□□□ -0.55
CCDC58-201ENST00000291458 NMT2O60551 498 aa11.61□□□□□ -0.55
CCDC58-201ENST00000291458 RGS2P41220 211 aa11.61□□□□□ -0.55
CCDC58-201ENST00000291458 TFAP4Q01664 338 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms