RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 RAD21O60216 631 aa11.4□□□□□ -0.58
HMHB1-201ENST00000289448 EVI5O60447 810 aa11.4□□□□□ -0.58
HMHB1-201ENST00000289448 CYP2C19P33261 490 aa11.4□□□□□ -0.58
HMHB1-201ENST00000289448 PLS1Q14651 629 aa11.4□□□□□ -0.58
HMHB1-201ENST00000289448 CCDC129Q6ZRS4 1044 aa11.4□□□□□ -0.58
HMHB1-201ENST00000289448 MB21D1Q8N884 522 aa11.4□□□□□ -0.58
HMHB1-201ENST00000289448 NYAP2Q9P242 653 aa11.4□□□□□ -0.58
HMHB1-201ENST00000289448 STAP2Q9UGK3 403 aa11.4□□□□□ -0.58
HMHB1-201ENST00000289448 NR2E3Q9Y5X4 410 aa11.4□□□□□ -0.58
HMHB1-201ENST00000289448 MYH8P13535 1937 aa11.4□□□□□ -0.58
HMHB1-201ENST00000289448 A0A0G2JMZ2 1700 aa11.4□□□□□ -0.58
HMHB1-201ENST00000289448 GREB1LQ9C091 1923 aaPredicted RBP11.39□□□□□ -0.59
HMHB1-201ENST00000289448 VWA5AO00534 786 aa11.39□□□□□ -0.59
HMHB1-201ENST00000289448 STRNO43815 780 aa11.39□□□□□ -0.59
HMHB1-201ENST00000289448 NDUFB10O96000 172 aa11.39□□□□□ -0.59
HMHB1-201ENST00000289448 COL6A1P12109 1028 aa11.39□□□□□ -0.59
HMHB1-201ENST00000289448 PDE1AP54750 535 aa11.39□□□□□ -0.59
HMHB1-201ENST00000289448 LRRFIP1Q32MZ4 808 aaKnown RBP11.39□□□□□ -0.59
HMHB1-201ENST00000289448 MFSD14CQ5VZR4 134 aa11.39□□□□□ -0.59
HMHB1-201ENST00000289448 DPP9Q86TI2 863 aa11.39□□□□□ -0.59
HMHB1-201ENST00000289448 NCAPG2Q86XI2 1143 aa11.39□□□□□ -0.59
HMHB1-201ENST00000289448 REPS2Q8NFH8 660 aa11.39□□□□□ -0.59
HMHB1-201ENST00000289448 NBPF3Q9H094 633 aa11.39□□□□□ -0.59
HMHB1-201ENST00000289448 C11orf49Q9H6J7 331 aa11.39□□□□□ -0.59
HMHB1-201ENST00000289448 GOPCQ9HD26 462 aa11.39□□□□□ -0.59
HMHB1-201ENST00000289448 INCENPQ9NQS7 918 aa11.39□□□□□ -0.59
HMHB1-201ENST00000289448 PCDH10Q9P2E7 1040 aa11.39□□□□□ -0.59
HMHB1-201ENST00000289448 CLIP2Q9UDT6 1046 aa11.39□□□□□ -0.59
HMHB1-201ENST00000289448 PPP1R9AQ9ULJ8 1098 aa11.39□□□□□ -0.59
HMHB1-201ENST00000289448 TACC3Q9Y6A5 838 aa11.39□□□□□ -0.59
HMHB1-201ENST00000289448 ALPK3Q96L96 1907 aa11.39□□□□□ -0.59
HMHB1-201ENST00000289448 F5H6K3 240 aa11.38□□□□□ -0.59
HMHB1-201ENST00000289448 KLRC3Q07444 240 aa11.38□□□□□ -0.59
HMHB1-201ENST00000289448 FAM47AQ5JRC9 791 aa11.38□□□□□ -0.59
HMHB1-201ENST00000289448 VPS53Q5VIR6 699 aa11.38□□□□□ -0.59
HMHB1-201ENST00000289448 MKL1Q969V6 931 aa11.38□□□□□ -0.59
HMHB1-201ENST00000289448 CEP95Q96GE4 821 aa11.38□□□□□ -0.59
HMHB1-201ENST00000289448 MROH8Q9H579 483 aa11.38□□□□□ -0.59
HMHB1-201ENST00000289448 MTMR4Q9NYA4 1195 aa11.38□□□□□ -0.59
HMHB1-201ENST00000289448 ZNF214Q9UL59 606 aaPredicted RBP11.38□□□□□ -0.59
HMHB1-201ENST00000289448 IGHDP01880 384 aa11.37□□□□□ -0.59
HMHB1-201ENST00000289448 PGK2P07205 417 aa11.37□□□□□ -0.59
HMHB1-201ENST00000289448 CYBAP13498 195 aa11.37□□□□□ -0.59
HMHB1-201ENST00000289448 CNGA1P29973 690 aa11.37□□□□□ -0.59
HMHB1-201ENST00000289448 STAT3P40763 770 aa11.37□□□□□ -0.59
HMHB1-201ENST00000289448 PPARAQ07869 468 aa11.37□□□□□ -0.59
HMHB1-201ENST00000289448 PRAMEF19Q5SWL8 479 aa11.37□□□□□ -0.59
HMHB1-201ENST00000289448 OLFML2BQ68BL8 750 aa11.37□□□□□ -0.59
HMHB1-201ENST00000289448 RIOX2Q8IUF8 465 aa11.37□□□□□ -0.59
HMHB1-201ENST00000289448 C7orf61Q8IZ16 206 aa11.37□□□□□ -0.59
HMHB1-201ENST00000289448 ZNF444Q8N0Y2 327 aaPredicted RBP11.37□□□□□ -0.59
HMHB1-201ENST00000289448 ABRAQ8N0Z2 381 aa11.37□□□□□ -0.59
HMHB1-201ENST00000289448 NEDD1Q8NHV4 660 aa11.37□□□□□ -0.59
HMHB1-201ENST00000289448 EXOC6Q8TAG9 804 aa11.37□□□□□ -0.59
HMHB1-201ENST00000289448 EVI5LQ96CN4 794 aa11.37□□□□□ -0.59
HMHB1-201ENST00000289448 FAM227BQ96M60 508 aa11.37□□□□□ -0.59
HMHB1-201ENST00000289448 NACAP1Q9BZK3 213 aa11.37□□□□□ -0.59
HMHB1-201ENST00000289448 LNPKQ9C0E8 428 aa11.37□□□□□ -0.59
HMHB1-201ENST00000289448 NAPBQ9H115 298 aa11.37□□□□□ -0.59
HMHB1-201ENST00000289448 DDX20Q9UHI6 824 aaKnown RBP11.37□□□□□ -0.59
HMHB1-201ENST00000289448 ZMYND8Q9ULU4 1186 aaPredicted RBP11.37□□□□□ -0.59
HMHB1-201ENST00000289448 PARP14Q460N5 1801 aa11.37□□□□□ -0.59
HMHB1-201ENST00000289448 SLC25A27O95847 323 aa11.36□□□□□ -0.59
HMHB1-201ENST00000289448 FCER1AP12319 257 aa11.36□□□□□ -0.59
HMHB1-201ENST00000289448 TFAP4Q01664 338 aa11.36□□□□□ -0.59
HMHB1-201ENST00000289448 CTDSPL2Q05D32 466 aa11.36□□□□□ -0.59
HMHB1-201ENST00000289448 LRRC26Q2I0M4 334 aa11.36□□□□□ -0.59
HMHB1-201ENST00000289448 SMC5Q8IY18 1101 aa11.36□□□□□ -0.59
HMHB1-201ENST00000289448 LRRC47Q8N1G4 583 aaKnown RBP11.36□□□□□ -0.59
HMHB1-201ENST00000289448 MAML3Q96JK9 1138 aa11.36□□□□□ -0.59
HMHB1-201ENST00000289448 SLF1Q9BQI6 1058 aa11.36□□□□□ -0.59
HMHB1-201ENST00000289448 ZNF287Q9HBT7 754 aa11.36□□□□□ -0.59
HMHB1-201ENST00000289448 ZBTB47Q9UFB7 747 aaPredicted RBP11.36□□□□□ -0.59
HMHB1-201ENST00000289448 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.36□□□□□ -0.59
HMHB1-201ENST00000289448 RIPK3Q9Y572 518 aa11.36□□□□□ -0.59
HMHB1-201ENST00000289448 ZNF236Q9UL36 1845 aa11.36□□□□□ -0.59
HMHB1-201ENST00000289448 PLIN4Q96Q06 1357 aa11.36□□□□□ -0.59
HMHB1-201ENST00000289448 A0A0D9SFI3 127 aa11.35□□□□□ -0.59
HMHB1-201ENST00000289448 NMT2O60551 498 aa11.35□□□□□ -0.59
HMHB1-201ENST00000289448 TTLL1O95922 423 aa11.35□□□□□ -0.59
HMHB1-201ENST00000289448 SYN1P17600 705 aa11.35□□□□□ -0.59
HMHB1-201ENST00000289448 PDE4BQ07343 736 aa11.35□□□□□ -0.59
HMHB1-201ENST00000289448 ZNF792Q3KQV3 632 aa11.35□□□□□ -0.59
HMHB1-201ENST00000289448 ANO1Q5XXA6 986 aa11.35□□□□□ -0.59
HMHB1-201ENST00000289448 B4GALNT3Q6L9W6 998 aa11.35□□□□□ -0.59
HMHB1-201ENST00000289448 GMCL1P1Q8NEA9 526 aa11.35□□□□□ -0.59
HMHB1-201ENST00000289448 MMP19Q99542 508 aa11.35□□□□□ -0.59
HMHB1-201ENST00000289448 COL11A1P12107 1806 aaPredicted RBP11.35□□□□□ -0.59
HMHB1-201ENST00000289448 A0A0C4DFX4 3053 aa11.34□□□□□ -0.59
HMHB1-201ENST00000289448 TSPY3P0CV98 308 aa11.34□□□□□ -0.59
HMHB1-201ENST00000289448 TSPY8P0CW00 308 aa11.34□□□□□ -0.59
HMHB1-201ENST00000289448 TAL1P17542 331 aaPredicted RBP11.34□□□□□ -0.59
HMHB1-201ENST00000289448 AAMPQ13685 434 aa11.34□□□□□ -0.59
HMHB1-201ENST00000289448 GJC2Q5T442 439 aaPredicted RBP11.34□□□□□ -0.59
HMHB1-201ENST00000289448 SLFN13Q68D06 897 aa11.34□□□□□ -0.59
HMHB1-201ENST00000289448 RASGRP2Q7LDG7 609 aa11.34□□□□□ -0.59
HMHB1-201ENST00000289448 ZNF589Q86UQ0 364 aaPredicted RBP11.34□□□□□ -0.59
HMHB1-201ENST00000289448 PRPF38AQ8NAV1 312 aaKnown RBP11.34□□□□□ -0.59
HMHB1-201ENST00000289448 KIFC2Q96AC6 838 aa11.34□□□□□ -0.59
HMHB1-201ENST00000289448 CHMP4CQ96CF2 233 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms