RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 KRT79Q5XKE5 535 aa14.01□□□□□ -0.17
SLC6A1-201ENST00000287766 ADGRL3Q9HAR2 1447 aa14□□□□□ -0.17
SLC6A1-201ENST00000287766 MYO5BQ9ULV0 1848 aa14□□□□□ -0.17
SLC6A1-201ENST00000287766 PPP1R12BO60237 982 aaPredicted RBP14□□□□□ -0.17
SLC6A1-201ENST00000287766 PLEKHA8P1O95397 391 aa14□□□□□ -0.17
SLC6A1-201ENST00000287766 IFNAR1P17181 557 aa14□□□□□ -0.17
SLC6A1-201ENST00000287766 GCKP35557 465 aa14□□□□□ -0.17
SLC6A1-201ENST00000287766 ZNF622Q969S3 477 aaKnown RBP eCLIP14□□□□□ -0.17
SLC6A1-201ENST00000287766 FERMT2Q96AC1 680 aa14□□□□□ -0.17
SLC6A1-201ENST00000287766 CABS1Q96KC9 395 aa14□□□□□ -0.17
SLC6A1-201ENST00000287766 TECPR2O15040 1411 aa14□□□□□ -0.17
SLC6A1-201ENST00000287766 UFL1O94874 794 aa14□□□□□ -0.17
SLC6A1-201ENST00000287766 ZNF804AQ7Z570 1209 aa14□□□□□ -0.17
SLC6A1-201ENST00000287766 DPF2Q92785 391 aa14□□□□□ -0.17
SLC6A1-201ENST00000287766 CAPN7Q9Y6W3 813 aa14□□□□□ -0.17
SLC6A1-201ENST00000287766 SPATA31A3Q5VYP0 1347 aa14□□□□□ -0.17
SLC6A1-201ENST00000287766 SOWAHDA6NJG2 315 aa14□□□□□ -0.17
SLC6A1-201ENST00000287766 ZBTB16Q05516 673 aa14□□□□□ -0.17
SLC6A1-201ENST00000287766 REREQ9P2R6 1566 aa14□□□□□ -0.17
SLC6A1-201ENST00000287766 KRT83P78385 493 aa14□□□□□ -0.17
SLC6A1-201ENST00000287766 PNMA1Q8ND90 353 aa14□□□□□ -0.17
SLC6A1-201ENST00000287766 FAM207AQ9NSI2 230 aaPredicted RBP14□□□□□ -0.17
SLC6A1-201ENST00000287766 VIMP08670 466 aaKnown RBP13.99□□□□□ -0.17
SLC6A1-201ENST00000287766 SHC4Q6S5L8 630 aa13.99□□□□□ -0.17
SLC6A1-201ENST00000287766 MKRN1Q9UHC7 482 aaKnown RBP13.99□□□□□ -0.17
SLC6A1-201ENST00000287766 DIP2AQ14689 1571 aa13.99□□□□□ -0.17
SLC6A1-201ENST00000287766 PSDA5PKW4 1024 aaPredicted RBP13.99□□□□□ -0.17
SLC6A1-201ENST00000287766 TRAF5O00463 557 aa13.99□□□□□ -0.17
SLC6A1-201ENST00000287766 BUB1BO60566 1050 aaPredicted RBP13.99□□□□□ -0.17
SLC6A1-201ENST00000287766 GNA11P29992 359 aa13.99□□□□□ -0.17
SLC6A1-201ENST00000287766 MXRA7P84157 204 aa13.99□□□□□ -0.17
SLC6A1-201ENST00000287766 CYP26C1Q6V0L0 522 aa13.99□□□□□ -0.17
SLC6A1-201ENST00000287766 SLF2Q8IX21 1173 aa13.99□□□□□ -0.17
SLC6A1-201ENST00000287766 NYXQ9GZU5 481 aa13.99□□□□□ -0.17
SLC6A1-201ENST00000287766 BIN2Q9UBW5 565 aaPredicted RBP13.99□□□□□ -0.17
SLC6A1-201ENST00000287766 IKBKBO14920 756 aa13.99□□□□□ -0.17
SLC6A1-201ENST00000287766 PRR29P0C7W0 189 aa13.99□□□□□ -0.17
SLC6A1-201ENST00000287766 PLCD1P51178 756 aa13.99□□□□□ -0.17
SLC6A1-201ENST00000287766 SARM1Q6SZW1 724 aa13.99□□□□□ -0.17
SLC6A1-201ENST00000287766 PAF1Q8N7H5 531 aa13.99□□□□□ -0.17
SLC6A1-201ENST00000287766 ANKRD2Q9GZV1 360 aa13.99□□□□□ -0.17
SLC6A1-201ENST00000287766 SAMD15Q9P1V8 674 aa13.99□□□□□ -0.17
SLC6A1-201ENST00000287766 KCNJ18B7U540 433 aa13.98□□□□□ -0.17
SLC6A1-201ENST00000287766 ENC1O14682 589 aa13.98□□□□□ -0.17
SLC6A1-201ENST00000287766 NMT2O60551 498 aa13.98□□□□□ -0.17
SLC6A1-201ENST00000287766 SCG2P13521 617 aa13.98□□□□□ -0.17
SLC6A1-201ENST00000287766 RBL2Q08999 1139 aa13.98□□□□□ -0.17
SLC6A1-201ENST00000287766 MORC3Q14149 939 aa13.98□□□□□ -0.17
SLC6A1-201ENST00000287766 KCNJ12Q14500 433 aa13.98□□□□□ -0.17
SLC6A1-201ENST00000287766 TACO1Q9BSH4 297 aaKnown RBP13.98□□□□□ -0.17
SLC6A1-201ENST00000287766 ISCA1Q9BUE6 129 aa13.98□□□□□ -0.17
SLC6A1-201ENST00000287766 ERFEQ4G0M1 354 aa13.98□□□□□ -0.17
SLC6A1-201ENST00000287766 SPATA1Q5VX52 437 aa13.98□□□□□ -0.17
SLC6A1-201ENST00000287766 CCNL1Q9UK58 526 aaPredicted RBP13.98□□□□□ -0.17
SLC6A1-201ENST00000287766 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.98□□□□□ -0.17
SLC6A1-201ENST00000287766 IL6STP40189 918 aaPredicted RBP13.98□□□□□ -0.17
SLC6A1-201ENST00000287766 ANTXR2P58335 489 aa13.98□□□□□ -0.17
SLC6A1-201ENST00000287766 GOLGA6BA6NDN3 693 aa13.98□□□□□ -0.17
SLC6A1-201ENST00000287766 ANKRD65E5RJM6 399 aa13.98□□□□□ -0.17
SLC6A1-201ENST00000287766 TECP42680 631 aa13.98□□□□□ -0.17
SLC6A1-201ENST00000287766 ARMCX5Q6P1M9 558 aa13.98□□□□□ -0.17
SLC6A1-201ENST00000287766 TMTC1Q8IUR5 882 aa13.98□□□□□ -0.17
SLC6A1-201ENST00000287766 BLIDQ8IZY5 108 aa13.98□□□□□ -0.17
SLC6A1-201ENST00000287766 ACRBPQ8NEB7 543 aa13.98□□□□□ -0.17
SLC6A1-201ENST00000287766 FUCA2Q9BTY2 467 aa13.98□□□□□ -0.17
SLC6A1-201ENST00000287766 UBN2Q6ZU65 1347 aa13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 LACTBP83111 547 aaPredicted RBP13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 DYNLL2Q96FJ2 89 aa13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 FOXP1Q9H334 677 aaPredicted RBP13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 CPVLQ9H3G5 476 aa13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 LY9Q9HBG7 655 aa13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 HOMER2Q9NSB8 354 aa13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 FAM205CA6NFA0 338 aa13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 HLA-DOAP06340 250 aa13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 PTPROQ16827 1216 aa13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 SV2BQ7L1I2 683 aa13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 VSTM4Q8IW00 320 aa13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 NELFCDQ8IXH7 590 aa13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 CNBD1Q8NA66 436 aa13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 ALDH8A1Q9H2A2 487 aaPredicted RBP13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 NLRC4Q9NPP4 1024 aa13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 TTF2Q9UNY4 1162 aaKnown RBP13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 PXDNLA1KZ92 1463 aa13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 PXDNQ92626 1479 aa13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 BICDL2A1A5D9 508 aa13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 FRMD3A2A2Y4 597 aa13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 HNRNPH2P55795 449 aaKnown RBP13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 SND1Q7KZF4 910 aaKnown RBP eCLIP13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 RPAINQ86UA6 219 aa13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 CABP7Q86V35 215 aa13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 SPATA24Q86W54 205 aa13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 ANKRD13CQ8N6S4 541 aa13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 BCAS4Q8TDM0 211 aa13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 JAKMIP2Q96AA8 810 aa13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 KCNK9Q9NPC2 374 aa13.97□□□□□ -0.17
SLC6A1-201ENST00000287766 USP17L8P0C7I0 530 aa13.96□□□□□ -0.17
SLC6A1-201ENST00000287766 CYP2D6P10635 497 aa13.96□□□□□ -0.17
SLC6A1-201ENST00000287766 GPR101Q96P66 508 aaPredicted RBP13.96□□□□□ -0.17
SLC6A1-201ENST00000287766 ZC3H12CQ9C0D7 883 aaKnown RBP13.96□□□□□ -0.17
SLC6A1-201ENST00000287766 RRP15Q9Y3B9 282 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms