RNA–Protein interactions for RNA: ENST00000287701.14

HMBOX1-201, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 3,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-201ENST00000287701 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 SPEF2Q9C093 1822 aa10.99□□□□□ -0.65
HMBOX1-201ENST00000287701 CFAP73A6NFT4 308 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 PPIP5K2O43314 1243 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 TRAPPC3O43617 180 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 BUB1BO60566 1050 aaPredicted RBP10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 FERP16591 822 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 LMNB2Q03252 620 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 BLMHQ13867 455 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 CWF19L1Q69YN2 538 aaKnown RBP10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 LRIG3Q6UXM1 1119 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 EIF1ADQ8N9N8 165 aaKnown RBP10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 CCT6BQ92526 530 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 DNAJC7Q99615 494 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 RIPOR2Q9Y4F9 1068 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 CCDC61Q9Y6R9 512 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 ECM29Q5VYK3 1845 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 FRMD3A2A2Y4 597 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 PI4KAP2A4QPH2 592 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 PPP1R12BO60237 982 aaPredicted RBP10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 CCNG1P51959 295 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 TBC1D25Q3MII6 688 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 HSP90AA4PQ58FG1 418 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 OTUD7BQ6GQQ9 843 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 CREG2Q8IUH2 290 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 PI4KAP1Q8N8J0 262 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 L3MBTL3Q96JM7 780 aaPredicted RBP10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 HAUS7Q99871 368 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 NUP58Q9BVL2 599 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 ZNF233A6NK53 670 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 PIP4K2AP48426 406 aaPredicted RBP10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 GCLCP48506 637 aaPredicted RBP10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 ATP1A2P50993 1020 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 HERVK_113P62684 666 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 ROR2Q01974 943 aaKnown RBP10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 CFAP58Q5T655 872 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 TSGA10Q9BZW7 698 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 GDF3Q9NR23 364 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 SNX12Q9UMY4 172 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 HPS5Q9UPZ3 1129 aa10.98□□□□□ -0.65
HMBOX1-201ENST00000287701 E7EVH7 732 aa10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 ENC1O14682 589 aa10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 SKAP2O75563 359 aaPredicted RBP10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 RPSAP08865 295 aaKnown RBP10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 VAV2P52735 878 aa10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 C2orf54Q08AI8 447 aa10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 ACCSLQ4AC99 568 aa10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 CCDC122Q5T0U0 273 aa10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 ILDR2Q71H61 639 aa10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 VPS37DQ86XT2 251 aa10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 CCDC155Q8N6L0 562 aa10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 TEX9Q8N6V9 391 aa10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 NECTIN2Q92692 538 aa10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 NOP53Q9NZM5 478 aaKnown RBP10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 FOXN1O15353 648 aa10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 SRGAP2O75044 1071 aa10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 MEA1Q16626 185 aa10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 MSL1Q68DK7 614 aa10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 SLC30A9Q6PML9 568 aa10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 CACNA2D3Q8IZS8 1091 aa10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 SH2D3CQ8N5H7 860 aa10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 AIDAQ96BJ3 306 aa10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 NUDT16Q96DE0 195 aaKnown RBP10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 ZBTB10Q96DT7 871 aa10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 SEC16BQ96JE7 1060 aa10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 IRAK4Q9NWZ3 460 aa10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 RPS6KL1Q9Y6S9 549 aa10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 FLT4P35916 1363 aa10.97□□□□□ -0.65
HMBOX1-201ENST00000287701 PDLIM1O00151 329 aa10.96□□□□□ -0.65
HMBOX1-201ENST00000287701 IFIT3O14879 490 aaKnown RBP10.96□□□□□ -0.65
HMBOX1-201ENST00000287701 ACTN4O43707 911 aaKnown RBP10.96□□□□□ -0.65
HMBOX1-201ENST00000287701 PTPREP23469 700 aa10.96□□□□□ -0.65
HMBOX1-201ENST00000287701 SPATA4Q8NEY3 305 aa10.96□□□□□ -0.65
HMBOX1-201ENST00000287701 PIK3R5Q8WYR1 880 aa10.96□□□□□ -0.65
HMBOX1-201ENST00000287701 CAPZA3Q96KX2 299 aa10.96□□□□□ -0.65
HMBOX1-201ENST00000287701 LRRC1Q9BTT6 524 aa10.96□□□□□ -0.65
HMBOX1-201ENST00000287701 SLC12A6Q9UHW9 1150 aa10.96□□□□□ -0.65
HMBOX1-201ENST00000287701 DMGDHQ9UI17 866 aaKnown RBP10.96□□□□□ -0.65
HMBOX1-201ENST00000287701 LEMD3Q9Y2U8 911 aa10.96□□□□□ -0.65
HMBOX1-201ENST00000287701 PCDHGC5Q9Y5F6 944 aa10.96□□□□□ -0.65
HMBOX1-201ENST00000287701 KRT9P35527 623 aa10.96□□□□□ -0.66
HMBOX1-201ENST00000287701 SEC24CP53992 1094 aa10.96□□□□□ -0.66
HMBOX1-201ENST00000287701 BYSLQ13895 437 aaKnown RBP10.96□□□□□ -0.66
HMBOX1-201ENST00000287701 ZNF268Q14587 947 aaPredicted RBP10.96□□□□□ -0.66
HMBOX1-201ENST00000287701 HAUS3Q68CZ6 603 aa10.96□□□□□ -0.66
HMBOX1-201ENST00000287701 SDCCAG8Q86SQ7 713 aaPredicted RBP10.96□□□□□ -0.66
HMBOX1-201ENST00000287701 IFT20Q8IY31 132 aa10.96□□□□□ -0.66
HMBOX1-201ENST00000287701 RPUSD2Q8IZ73 545 aaKnown RBP10.96□□□□□ -0.66
HMBOX1-201ENST00000287701 KBTBD3Q8NAB2 608 aa10.96□□□□□ -0.66
HMBOX1-201ENST00000287701 WHAMMQ8TF30 809 aa10.96□□□□□ -0.66
HMBOX1-201ENST00000287701 ALS2CR12Q96Q35 445 aa10.96□□□□□ -0.66
HMBOX1-201ENST00000287701 NUP88Q99567 741 aaPredicted RBP10.96□□□□□ -0.66
HMBOX1-201ENST00000287701 TMBIM4Q9HC24 238 aa10.96□□□□□ -0.66
HMBOX1-201ENST00000287701 C9orf78Q9NZ63 289 aaPredicted RBP10.96□□□□□ -0.66
HMBOX1-201ENST00000287701 A0A1W2PQC6 194 aa10.96□□□□□ -0.66
HMBOX1-201ENST00000287701 CDKL5O76039 1030 aa10.96□□□□□ -0.66
HMBOX1-201ENST00000287701 ANP32DO95626 131 aa10.96□□□□□ -0.66
HMBOX1-201ENST00000287701 TCP1P17987 556 aaKnown RBP10.96□□□□□ -0.66
HMBOX1-201ENST00000287701 PAK2Q13177 524 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms