RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 PPP2R2AP63151 447 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 HP1BP3Q5SSJ5 553 aaPredicted RBP3.26□□□□□ -1.89
CHD1-201ENST00000284049 MAP1SQ66K74 1059 aaPredicted RBP3.26□□□□□ -1.89
CHD1-201ENST00000284049 RUFY4Q6ZNE9 571 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 C4orf50Q6ZRC1 276 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 SRLQ86TD4 932 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 CCDC144CPQ8IYA2 1237 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 CCDC34Q96HJ3 373 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 THG1LQ9NWX6 298 aaKnown RBP3.26□□□□□ -1.89
CHD1-201ENST00000284049 MSRB2Q9Y3D2 182 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 DTNBO60941 627 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 EFCAB14O75071 495 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 HTR3BO95264 441 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 HOXB3P14651 431 aaPredicted RBP3.26□□□□□ -1.89
CHD1-201ENST00000284049 GRM3Q14832 879 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 TM4SF20Q53R12 229 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 CNTD1Q8N815 330 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 PJA1Q8NG27 643 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 FGD4Q96M96 766 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 AARSD1Q9BTE6 412 aaKnown RBP3.26□□□□□ -1.89
CHD1-201ENST00000284049 ZDHHC3Q9NYG2 299 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 CFAP74Q9C0B2 1584 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 DEPDC5O75140 1603 aa3.26□□□□□ -1.89
CHD1-201ENST00000284049 GSTA4O15217 222 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 HSPA6P17066 643 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 HALP42357 657 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 RENBPP51606 427 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 MTMR1Q13613 665 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 ELF2Q15723 593 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 FAM209AQ5JX71 171 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 RFX8Q6ZV50 586 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 C19orf47Q8N9M1 422 aaKnown RBP3.25□□□□□ -1.89
CHD1-201ENST00000284049 ZNF280CQ8ND82 737 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 BHMTQ93088 406 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 INSM2Q96T92 566 aaPredicted RBP3.25□□□□□ -1.89
CHD1-201ENST00000284049 GAS2L1Q99501 681 aaPredicted RBP3.25□□□□□ -1.89
CHD1-201ENST00000284049 LATS2Q9NRM7 1088 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 TAGLN3Q9UI15 199 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 ASAP1Q9ULH1 1129 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 PREX2Q70Z35 1606 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 EIF2AK4Q9P2K8 1649 aaKnown RBP3.25□□□□□ -1.89
CHD1-201ENST00000284049 MMP20O60882 483 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 ALDH1A1P00352 501 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 CHGBP05060 677 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 SLFN14P0C7P3 912 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 TRIM27P14373 513 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 RPS26P62854 115 aaKnown RBP3.25□□□□□ -1.89
CHD1-201ENST00000284049 SUMO1P63165 101 aaKnown RBP3.25□□□□□ -1.89
CHD1-201ENST00000284049 PLAURQ03405 335 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 ZNF460Q14592 562 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 JAKMIP3Q5VZ66 844 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 ALG1Q9BT22 464 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 ASPSCR1Q9BZE9 553 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 ASCC2Q9H1I8 757 aaPredicted RBP3.25□□□□□ -1.89
CHD1-201ENST00000284049 EHMT1Q9H9B1 1298 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 DZANK1Q9NVP4 752 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 EPRSP07814 1512 aaKnown RBP3.25□□□□□ -1.89
CHD1-201ENST00000284049 EHBP1L1Q8N3D4 1523 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 PABPN1LA6NDY0 278 aaKnown RBP3.25□□□□□ -1.89
CHD1-201ENST00000284049 FKBP9O95302 570 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 EIF2AK2P19525 551 aaKnown RBP3.25□□□□□ -1.89
CHD1-201ENST00000284049 IREB2P48200 963 aaKnown RBP3.25□□□□□ -1.89
CHD1-201ENST00000284049 MYBPC2Q14324 1141 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 DDB1Q16531 1140 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 C4orf17Q53FE4 359 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 GGT6Q6P531 493 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 FKBP9P1Q75LS8 142 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 HDXQ7Z353 690 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 CHCHD4Q8N4Q1 142 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 ANKRD24Q8TF21 1146 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 ATP10AO60312 1499 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 PLB1Q6P1J6 1458 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 INO80DQ53TQ3 878 aaPredicted RBP3.25□□□□□ -1.89
CHD1-201ENST00000284049 CFAP58Q5T655 872 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 SPICE1Q8N0Z3 855 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 TMEM40Q8WWA1 233 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 RUBCNQ92622 972 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 HSPBAP1Q96EW2 488 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 ZSCAN31Q96LW9 406 aaPredicted RBP3.25□□□□□ -1.89
CHD1-201ENST00000284049 EFCC1Q9HA90 598 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 PTPRHQ9HD43 1115 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 ABCB6Q9NP58 842 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 FBXL21Q9UKT6 434 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 LMTK2Q8IWU2 1503 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 DCDC2BA2VCK2 349 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 TK2O00142 265 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 FBXO21O94952 628 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 CYP2E1P05181 493 aaPredicted RBP3.25□□□□□ -1.89
CHD1-201ENST00000284049 GRK2P25098 689 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 CYP2C19P33261 490 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 ADD1P35611 737 aaKnown RBP3.25□□□□□ -1.89
CHD1-201ENST00000284049 FHOD3Q2V2M9 1422 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 LSRQ86X29 649 aaPredicted RBP3.25□□□□□ -1.89
CHD1-201ENST00000284049 C3orf58Q8NDZ4 430 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 APOL5Q9BWW9 433 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 NLRC4Q9NPP4 1024 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 PCDHB5Q9Y5E4 795 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 KIF13AQ9H1H9 1805 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 A0A087X0B3 334 aa3.25□□□□□ -1.89
CHD1-201ENST00000284049 PDE2AO00408 941 aaPredicted RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms