RNA–Protein interactions for RNA: ENST00000282878.5

RAB3C-201, Transcript of RAB3C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3C, Length 8,896 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-201ENST00000282878 SGSM3Q96HU1 749 aa4.2□□□□□ -1.74
RAB3C-201ENST00000282878 TM6SF1Q9BZW5 370 aa4.2□□□□□ -1.74
RAB3C-201ENST00000282878 BMP2KQ9NSY1 1161 aaPredicted RBP4.2□□□□□ -1.74
RAB3C-201ENST00000282878 CLIP2Q9UDT6 1046 aa4.2□□□□□ -1.74
RAB3C-201ENST00000282878 EN1Q05925 392 aaPredicted RBP4.19□□□□□ -1.74
RAB3C-201ENST00000282878 FKBP15Q5T1M5 1219 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 JAKMIP3Q5VZ66 844 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 LRRN4CLQ8ND94 238 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 TEX13AQ9BXU3 409 aaPredicted RBP4.19□□□□□ -1.74
RAB3C-201ENST00000282878 IFNKQ9P0W0 207 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 A0A087X0B3 334 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 ATL2Q8NHH9 583 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 CACTINQ8WUQ7 758 aaKnown RBP4.19□□□□□ -1.74
RAB3C-201ENST00000282878 SHTN1A0MZ66 631 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 BICDL2A1A5D9 508 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 UQCRFS1P1P0C7P4 283 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 PSMA4P25789 261 aaKnown RBP4.19□□□□□ -1.74
RAB3C-201ENST00000282878 HMGB2P26583 209 aaKnown RBP4.19□□□□□ -1.74
RAB3C-201ENST00000282878 DDR1Q08345 913 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 RAPGEF1Q13905 1077 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 UBE2SQ16763 222 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 AKNAD1Q5T1N1 836 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 TTBK2Q6IQ55 1244 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 PRR5LQ6MZQ0 368 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 TEX19Q8NA77 164 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 LINC00301Q8NCQ3 95 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 TRIM6Q9C030 488 aaPredicted RBP4.19□□□□□ -1.74
RAB3C-201ENST00000282878 CLCN1P35523 988 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 FLT3P36888 993 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 NLRP5P59047 1200 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 TMED1Q13445 227 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 KRT32Q14532 448 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 NOLC1Q14978 699 aaKnown RBP eCLIP4.19□□□□□ -1.74
RAB3C-201ENST00000282878 TMEM259Q4ZIN3 620 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 USP17L2Q6R6M4 530 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 HEATR3Q7Z4Q2 680 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 FOXP4Q8IVH2 680 aaPredicted RBP4.19□□□□□ -1.74
RAB3C-201ENST00000282878 GSDMBQ8TAX9 411 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 TRIM17Q9Y577 477 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 CARMIL3Q8ND23 1372 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 KIF5BP33176 963 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 TXNRD1Q16881 649 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 ANO1Q5XXA6 986 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.19□□□□□ -1.74
RAB3C-201ENST00000282878 DNAAF5Q86Y56 855 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 ZNF654Q8IZM8 581 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 MRPS27Q92552 414 aaKnown RBP4.19□□□□□ -1.74
RAB3C-201ENST00000282878 KCNB2Q92953 911 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 NUCKS1Q9H1E3 243 aaKnown RBP4.19□□□□□ -1.74
RAB3C-201ENST00000282878 KANSL2Q9H9L4 492 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 LY9Q9HBG7 655 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 MKNK2Q9HBH9 465 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 HOOK1Q9UJC3 728 aaKnown RBP4.19□□□□□ -1.74
RAB3C-201ENST00000282878 ERICH2A1L162 156 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 CIAO1O76071 339 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 MYL3P08590 195 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 CCDC192P0DO97 292 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 MRPS25P82663 173 aaKnown RBP4.19□□□□□ -1.74
RAB3C-201ENST00000282878 KARSQ15046 597 aaKnown RBP4.19□□□□□ -1.74
RAB3C-201ENST00000282878 RTN1Q16799 776 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 SLC35G1Q2M3R5 365 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 MAATS1Q7Z4T9 603 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 CNBD1Q8NA66 436 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 TMC2Q8TDI7 906 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 C3P01024 1663 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 VWA3AA6NCI4 1184 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 IPO5O00410 1097 aaKnown RBP4.19□□□□□ -1.74
RAB3C-201ENST00000282878 GBP2P32456 591 aaPredicted RBP4.19□□□□□ -1.74
RAB3C-201ENST00000282878 GRM1Q13255 1194 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 ZNF467Q7Z7K2 595 aaPredicted RBP4.19□□□□□ -1.74
RAB3C-201ENST00000282878 USP6NLQ92738 828 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 PPP1R9BQ96SB3 815 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 FUCA2Q9BTY2 467 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 CTNNA3Q9UI47 895 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 ZKSCAN5Q9Y2L8 839 aa4.19□□□□□ -1.74
RAB3C-201ENST00000282878 KIF1CO43896 1103 aaKnown RBP4.18□□□□□ -1.74
RAB3C-201ENST00000282878 CBX1P83916 185 aa4.18□□□□□ -1.74
RAB3C-201ENST00000282878 TYW1BQ6NUM6 668 aa4.18□□□□□ -1.74
RAB3C-201ENST00000282878 CCDC91Q7Z6B0 441 aa4.18□□□□□ -1.74
RAB3C-201ENST00000282878 PROM2Q8N271 834 aa4.18□□□□□ -1.74
RAB3C-201ENST00000282878 IGDCC4Q8TDY8 1250 aa4.18□□□□□ -1.74
RAB3C-201ENST00000282878 CCDC43Q96MW1 224 aaKnown RBP4.18□□□□□ -1.74
RAB3C-201ENST00000282878 SAMSN1Q9NSI8 373 aaKnown RBP4.18□□□□□ -1.74
RAB3C-201ENST00000282878 SETD1AO15047 1707 aaKnown RBP4.18□□□□□ -1.74
RAB3C-201ENST00000282878 RPS6KA4O75676 772 aa4.18□□□□□ -1.74
RAB3C-201ENST00000282878 CDR1P51861 262 aa4.18□□□□□ -1.74
RAB3C-201ENST00000282878 IKQ13123 557 aaPredicted RBP4.18□□□□□ -1.74
RAB3C-201ENST00000282878 TPTE2Q6XPS3 522 aa4.18□□□□□ -1.74
RAB3C-201ENST00000282878 SRBD1Q8N5C6 995 aaKnown RBP4.18□□□□□ -1.74
RAB3C-201ENST00000282878 FANCBQ8NB91 859 aa4.18□□□□□ -1.74
RAB3C-201ENST00000282878 N4BP2L2Q92802 583 aaPredicted RBP4.18□□□□□ -1.74
RAB3C-201ENST00000282878 DDX27Q96GQ7 796 aaKnown RBP4.18□□□□□ -1.74
RAB3C-201ENST00000282878 PIGSQ96S52 555 aa4.18□□□□□ -1.74
RAB3C-201ENST00000282878 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.18□□□□□ -1.74
RAB3C-201ENST00000282878 POLLQ9UGP5 575 aa4.18□□□□□ -1.74
RAB3C-201ENST00000282878 SSBP05455 408 aaKnown RBP eCLIP4.18□□□□□ -1.74
RAB3C-201ENST00000282878 SESN3P58005 492 aa4.18□□□□□ -1.74
RAB3C-201ENST00000282878 ANKRD1Q15327 319 aa4.18□□□□□ -1.74
RAB3C-201ENST00000282878 DYMQ7RTS9 669 aa4.18□□□□□ -1.74
RAB3C-201ENST00000282878 ELMO3Q96BJ8 720 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms