RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 BRAPQ7Z569 592 aa12.64□□□□□ -0.39
GGPS1-201ENST00000282841 TCP11L1Q9NUJ3 509 aa12.64□□□□□ -0.39
GGPS1-201ENST00000282841 RTEL1Q9NZ71 1219 aa12.64□□□□□ -0.39
GGPS1-201ENST00000282841 HDAC9Q9UKV0 1011 aa12.64□□□□□ -0.39
GGPS1-201ENST00000282841 CD2APQ9Y5K6 639 aa12.64□□□□□ -0.39
GGPS1-201ENST00000282841 ELP1O95163 1332 aa12.64□□□□□ -0.39
GGPS1-201ENST00000282841 ZNF541Q9H0D2 1346 aa12.64□□□□□ -0.39
GGPS1-201ENST00000282841 PALM3A6NDB9 673 aaPredicted RBP12.64□□□□□ -0.39
GGPS1-201ENST00000282841 ZNF445P59923 1031 aa12.64□□□□□ -0.39
GGPS1-201ENST00000282841 HDLBPQ00341 1268 aaKnown RBP12.64□□□□□ -0.39
GGPS1-201ENST00000282841 CCDC96Q2M329 555 aa12.64□□□□□ -0.39
GGPS1-201ENST00000282841 PIK3AP1Q6ZUJ8 805 aa12.64□□□□□ -0.39
GGPS1-201ENST00000282841 PHF20Q9BVI0 1012 aa12.64□□□□□ -0.39
GGPS1-201ENST00000282841 MYOZ2Q9NPC6 264 aa12.64□□□□□ -0.39
GGPS1-201ENST00000282841 NDUFA8P51970 172 aa12.63□□□□□ -0.39
GGPS1-201ENST00000282841 ZNF174Q15697 407 aa12.63□□□□□ -0.39
GGPS1-201ENST00000282841 LRSAM1Q6UWE0 723 aa12.63□□□□□ -0.39
GGPS1-201ENST00000282841 SIAH1Q8IUQ4 282 aa12.63□□□□□ -0.39
GGPS1-201ENST00000282841 ANKS1AQ92625 1134 aa12.63□□□□□ -0.39
GGPS1-201ENST00000282841 COA7Q96BR5 231 aa12.63□□□□□ -0.39
GGPS1-201ENST00000282841 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.63□□□□□ -0.39
GGPS1-201ENST00000282841 TMOD2Q9NZR1 351 aa12.63□□□□□ -0.39
GGPS1-201ENST00000282841 FOCADQ5VW36 1801 aa12.63□□□□□ -0.39
GGPS1-201ENST00000282841 TTLL1O95922 423 aa12.63□□□□□ -0.39
GGPS1-201ENST00000282841 PFKFB3Q16875 520 aaPredicted RBP12.63□□□□□ -0.39
GGPS1-201ENST00000282841 MICALL2Q8IY33 904 aa12.63□□□□□ -0.39
GGPS1-201ENST00000282841 MAP3K14Q99558 947 aa12.63□□□□□ -0.39
GGPS1-201ENST00000282841 MRIQ9BWK5 157 aa12.63□□□□□ -0.39
GGPS1-201ENST00000282841 IGSF3O75054 1194 aa12.63□□□□□ -0.39
GGPS1-201ENST00000282841 ECE1P42892 770 aa12.63□□□□□ -0.39
GGPS1-201ENST00000282841 RCAN1P53805 252 aa12.63□□□□□ -0.39
GGPS1-201ENST00000282841 SOGA3Q5TF21 947 aa12.63□□□□□ -0.39
GGPS1-201ENST00000282841 UIMC1Q96RL1 719 aa12.63□□□□□ -0.39
GGPS1-201ENST00000282841 CNTNAP1P78357 1384 aa12.62□□□□□ -0.39
GGPS1-201ENST00000282841 KIF13BQ9NQT8 1826 aa12.62□□□□□ -0.39
GGPS1-201ENST00000282841 KRT2P35908 639 aa12.62□□□□□ -0.39
GGPS1-201ENST00000282841 DGKZQ13574 1117 aa12.62□□□□□ -0.39
GGPS1-201ENST00000282841 ABCB5Q2M3G0 1257 aa12.62□□□□□ -0.39
GGPS1-201ENST00000282841 ILDR2Q71H61 639 aa12.62□□□□□ -0.39
GGPS1-201ENST00000282841 SECISBP2LQ93073 1101 aaKnown RBP12.62□□□□□ -0.39
GGPS1-201ENST00000282841 SYAP1Q96A49 352 aaPredicted RBP12.62□□□□□ -0.39
GGPS1-201ENST00000282841 NUP62CLQ9H1M0 184 aa12.62□□□□□ -0.39
GGPS1-201ENST00000282841 TNMDQ9H2S6 317 aa12.62□□□□□ -0.39
GGPS1-201ENST00000282841 DHX36Q9H2U1 1008 aaKnown RBP12.62□□□□□ -0.39
GGPS1-201ENST00000282841 MYH8P13535 1937 aa12.62□□□□□ -0.39
GGPS1-201ENST00000282841 IGKV6D-41A0A0C4DH26 115 aa12.62□□□□□ -0.39
GGPS1-201ENST00000282841 PTPAQ15257 358 aa12.62□□□□□ -0.39
GGPS1-201ENST00000282841 ISM2Q6H9L7 571 aa12.62□□□□□ -0.39
GGPS1-201ENST00000282841 USP49Q70CQ1 688 aa12.62□□□□□ -0.39
GGPS1-201ENST00000282841 ACER1Q8TDN7 264 aa12.62□□□□□ -0.39
GGPS1-201ENST00000282841 SPON1Q9HCB6 807 aa12.62□□□□□ -0.39
GGPS1-201ENST00000282841 POLR3EQ9NVU0 708 aa12.62□□□□□ -0.39
GGPS1-201ENST00000282841 SWAP70Q9UH65 585 aa12.62□□□□□ -0.39
GGPS1-201ENST00000282841 CNOT7Q9UIV1 285 aaKnown RBP12.62□□□□□ -0.39
GGPS1-201ENST00000282841 A0A1W2PRG0 241 aa12.61□□□□□ -0.39
GGPS1-201ENST00000282841 ICA1Q05084 483 aa12.61□□□□□ -0.39
GGPS1-201ENST00000282841 SNW1Q13573 536 aaKnown RBP12.61□□□□□ -0.39
GGPS1-201ENST00000282841 PPP2R5BQ15173 497 aa12.61□□□□□ -0.39
GGPS1-201ENST00000282841 SPDYE2Q495Y8 402 aa12.61□□□□□ -0.39
GGPS1-201ENST00000282841 GLIS2Q9BZE0 524 aaPredicted RBP12.61□□□□□ -0.39
GGPS1-201ENST00000282841 SIPA1L1O43166 1804 aa12.61□□□□□ -0.39
GGPS1-201ENST00000282841 USP17L10C9JJH3 530 aa12.61□□□□□ -0.39
GGPS1-201ENST00000282841 XBP1P17861 261 aa12.61□□□□□ -0.39
GGPS1-201ENST00000282841 NASPP49321 788 aaPredicted RBP12.61□□□□□ -0.39
GGPS1-201ENST00000282841 RASA3Q14644 834 aa12.61□□□□□ -0.39
GGPS1-201ENST00000282841 SLC39A14Q15043 492 aa12.61□□□□□ -0.39
GGPS1-201ENST00000282841 AXDND1Q5T1B0 1012 aaPredicted RBP12.61□□□□□ -0.39
GGPS1-201ENST00000282841 TSPY26PQ9H489 355 aa12.61□□□□□ -0.39
GGPS1-201ENST00000282841 MYH15Q9Y2K3 1946 aa12.61□□□□□ -0.39
GGPS1-201ENST00000282841 PDILTQ8N807 584 aa12.6□□□□□ -0.39
GGPS1-201ENST00000282841 FOXP1Q9H334 677 aaPredicted RBP12.6□□□□□ -0.39
GGPS1-201ENST00000282841 MYO3BQ8WXR4 1341 aa12.6□□□□□ -0.39
GGPS1-201ENST00000282841 MCM7P33993 719 aa12.6□□□□□ -0.39
GGPS1-201ENST00000282841 MRE11P49959 708 aa12.6□□□□□ -0.39
GGPS1-201ENST00000282841 NAPAP54920 295 aa12.6□□□□□ -0.39
GGPS1-201ENST00000282841 PLCB2Q00722 1185 aa12.6□□□□□ -0.39
GGPS1-201ENST00000282841 IKQ13123 557 aaPredicted RBP12.6□□□□□ -0.39
GGPS1-201ENST00000282841 PRKG1Q13976 671 aa12.6□□□□□ -0.39
GGPS1-201ENST00000282841 GRIPAP1Q4V328 841 aa12.6□□□□□ -0.39
GGPS1-201ENST00000282841 KIAA1755Q5JYT7 1200 aa12.6□□□□□ -0.39
GGPS1-201ENST00000282841 SHC4Q6S5L8 630 aa12.6□□□□□ -0.39
GGPS1-201ENST00000282841 CCDC73Q6ZRK6 1079 aa12.6□□□□□ -0.39
GGPS1-201ENST00000282841 AGBL3Q8NEM8 1001 aa12.6□□□□□ -0.39
GGPS1-201ENST00000282841 TMEM260Q9NX78 707 aa12.6□□□□□ -0.39
GGPS1-201ENST00000282841 CDC25AP30304 524 aa12.59□□□□□ -0.39
GGPS1-201ENST00000282841 TATDN1Q6P1N9 297 aa12.59□□□□□ -0.39
GGPS1-201ENST00000282841 FOXP4Q8IVH2 680 aaPredicted RBP12.59□□□□□ -0.39
GGPS1-201ENST00000282841 ADGRF4Q8IZF3 695 aa12.59□□□□□ -0.39
GGPS1-201ENST00000282841 EHD4Q9H223 541 aa12.59□□□□□ -0.39
GGPS1-201ENST00000282841 BIN2Q9UBW5 565 aaPredicted RBP12.59□□□□□ -0.39
GGPS1-201ENST00000282841 BRCA1P38398 1863 aaKnown RBP12.59□□□□□ -0.39
GGPS1-201ENST00000282841 FER1L6Q2WGJ9 1857 aa12.59□□□□□ -0.39
GGPS1-201ENST00000282841 STXBP3O00186 592 aa12.59□□□□□ -0.39
GGPS1-201ENST00000282841 BIN1O00499 593 aa12.59□□□□□ -0.39
GGPS1-201ENST00000282841 PPP1R11O60927 126 aaPredicted RBP12.59□□□□□ -0.39
GGPS1-201ENST00000282841 ENTPD3O75355 529 aa12.59□□□□□ -0.39
GGPS1-201ENST00000282841 PFKFB1P16118 471 aa12.59□□□□□ -0.39
GGPS1-201ENST00000282841 SLC1A4P43007 532 aa12.59□□□□□ -0.39
GGPS1-201ENST00000282841 TNIP1Q15025 636 aa12.59□□□□□ -0.39
GGPS1-201ENST00000282841 CCDC178Q5BJE1 867 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms