RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 KCNJ14Q9UNX9 436 aa13.18□□□□□ -0.3
XRCC4-201ENST00000282268 CTNND1O60716 968 aaKnown RBP13.18□□□□□ -0.3
XRCC4-201ENST00000282268 BAG4O95429 457 aaKnown RBP13.18□□□□□ -0.3
XRCC4-201ENST00000282268 ASNSP08243 561 aa13.18□□□□□ -0.3
XRCC4-201ENST00000282268 IKQ13123 557 aaPredicted RBP13.18□□□□□ -0.3
XRCC4-201ENST00000282268 TTLL12Q14166 644 aaPredicted RBP13.18□□□□□ -0.3
XRCC4-201ENST00000282268 SLC35G1Q2M3R5 365 aa13.18□□□□□ -0.3
XRCC4-201ENST00000282268 TPRNQ4KMQ1 711 aa13.18□□□□□ -0.3
XRCC4-201ENST00000282268 ASPRV1Q53RT3 343 aa13.18□□□□□ -0.3
XRCC4-201ENST00000282268 MAP1SQ66K74 1059 aaPredicted RBP13.18□□□□□ -0.3
XRCC4-201ENST00000282268 MKL1Q969V6 931 aa13.18□□□□□ -0.3
XRCC4-201ENST00000282268 CDCA5Q96FF9 252 aa13.18□□□□□ -0.3
XRCC4-201ENST00000282268 GBP4Q96PP9 640 aa13.18□□□□□ -0.3
XRCC4-201ENST00000282268 PICK1Q9NRD5 415 aa13.18□□□□□ -0.3
XRCC4-201ENST00000282268 VPS54Q9P1Q0 977 aa13.18□□□□□ -0.3
XRCC4-201ENST00000282268 CYTH3O43739 400 aa13.17□□□□□ -0.3
XRCC4-201ENST00000282268 NDUFB10O96000 172 aa13.17□□□□□ -0.3
XRCC4-201ENST00000282268 VEGFAP15692 232 aaPredicted RBP13.17□□□□□ -0.3
XRCC4-201ENST00000282268 ZNF543Q08ER8 600 aa13.17□□□□□ -0.3
XRCC4-201ENST00000282268 GNL2Q13823 731 aaKnown RBP13.17□□□□□ -0.3
XRCC4-201ENST00000282268 PKN1Q16512 942 aa13.17□□□□□ -0.3
XRCC4-201ENST00000282268 KIAA1755Q5JYT7 1200 aa13.17□□□□□ -0.3
XRCC4-201ENST00000282268 KRT40Q6A162 431 aa13.17□□□□□ -0.3
XRCC4-201ENST00000282268 PNMA8AQ86V59 439 aaPredicted RBP13.17□□□□□ -0.3
XRCC4-201ENST00000282268 GPKOWQ92917 476 aaPredicted RBP eCLIP13.17□□□□□ -0.3
XRCC4-201ENST00000282268 LZTS2Q9BRK4 669 aa13.17□□□□□ -0.3
XRCC4-201ENST00000282268 ZNF408Q9H9D4 720 aa13.17□□□□□ -0.3
XRCC4-201ENST00000282268 SSC5DA1L4H1 1573 aa13.17□□□□□ -0.3
XRCC4-201ENST00000282268 GREB1LQ9C091 1923 aaPredicted RBP13.16□□□□□ -0.3
XRCC4-201ENST00000282268 USP2O75604 605 aaPredicted RBP13.16□□□□□ -0.3
XRCC4-201ENST00000282268 SNAP25P60880 206 aa13.16□□□□□ -0.3
XRCC4-201ENST00000282268 RESTQ13127 1097 aa13.16□□□□□ -0.3
XRCC4-201ENST00000282268 MOB2Q70IA6 237 aa13.16□□□□□ -0.3
XRCC4-201ENST00000282268 FBXO18Q8NFZ0 1043 aa13.16□□□□□ -0.3
XRCC4-201ENST00000282268 ZC3H15Q8WU90 426 aaKnown RBP13.16□□□□□ -0.3
XRCC4-201ENST00000282268 DCAF4Q8WV16 495 aa13.16□□□□□ -0.3
XRCC4-201ENST00000282268 PIGSQ96S52 555 aa13.16□□□□□ -0.3
XRCC4-201ENST00000282268 GOPCQ9HD26 462 aa13.16□□□□□ -0.3
XRCC4-201ENST00000282268 TRAF5O00463 557 aa13.15□□□□□ -0.3
XRCC4-201ENST00000282268 SNHG28P0DPA3 235 aa13.15□□□□□ -0.3
XRCC4-201ENST00000282268 SCG2P13521 617 aa13.15□□□□□ -0.3
XRCC4-201ENST00000282268 NF2P35240 595 aa13.15□□□□□ -0.3
XRCC4-201ENST00000282268 DNM1Q05193 864 aaKnown RBP13.15□□□□□ -0.3
XRCC4-201ENST00000282268 FMR1Q06787 632 aaKnown RBP eCLIP13.15□□□□□ -0.3
XRCC4-201ENST00000282268 DGKZQ13574 1117 aa13.15□□□□□ -0.3
XRCC4-201ENST00000282268 HEATR3Q7Z4Q2 680 aa13.15□□□□□ -0.3
XRCC4-201ENST00000282268 SCYL3Q8IZE3 742 aa13.15□□□□□ -0.3
XRCC4-201ENST00000282268 GMCL1P1Q8NEA9 526 aa13.15□□□□□ -0.3
XRCC4-201ENST00000282268 KLRG1Q96E93 195 aa13.15□□□□□ -0.3
XRCC4-201ENST00000282268 RRP36Q96EU6 259 aaKnown RBP13.15□□□□□ -0.3
XRCC4-201ENST00000282268 GDPD2Q9HCC8 539 aa13.15□□□□□ -0.3
XRCC4-201ENST00000282268 NMRK2Q9NPI5 230 aa13.15□□□□□ -0.3
XRCC4-201ENST00000282268 ZNF112Q9UJU3 913 aa13.15□□□□□ -0.3
XRCC4-201ENST00000282268 TMX2Q9Y320 296 aa13.15□□□□□ -0.3
XRCC4-201ENST00000282268 MYH4Q9Y623 1939 aa13.15□□□□□ -0.3
XRCC4-201ENST00000282268 USP17L10C9JJH3 530 aa13.15□□□□□ -0.31
XRCC4-201ENST00000282268 TMEM232C9JQI7 657 aa13.15□□□□□ -0.31
XRCC4-201ENST00000282268 PPP1R12BO60237 982 aaPredicted RBP13.15□□□□□ -0.31
XRCC4-201ENST00000282268 BMP3P12645 472 aa13.15□□□□□ -0.31
XRCC4-201ENST00000282268 XBP1P17861 261 aa13.15□□□□□ -0.31
XRCC4-201ENST00000282268 MCM4P33991 863 aa13.15□□□□□ -0.31
XRCC4-201ENST00000282268 PFKFB3Q16875 520 aaPredicted RBP13.15□□□□□ -0.31
XRCC4-201ENST00000282268 FAM83BQ5T0W9 1011 aa13.15□□□□□ -0.31
XRCC4-201ENST00000282268 ADGRF4Q8IZF3 695 aa13.15□□□□□ -0.31
XRCC4-201ENST00000282268 SPZ1Q9BXG8 430 aa13.15□□□□□ -0.31
XRCC4-201ENST00000282268 SH2D4AQ9H788 454 aa13.15□□□□□ -0.31
XRCC4-201ENST00000282268 SEC63Q9UGP8 760 aaKnown RBP13.15□□□□□ -0.31
XRCC4-201ENST00000282268 CNPY2Q9Y2B0 182 aa13.15□□□□□ -0.31
XRCC4-201ENST00000282268 WDR90Q96KV7 1748 aa13.14□□□□□ -0.31
XRCC4-201ENST00000282268 POLR2AP24928 1970 aaKnown RBP13.14□□□□□ -0.31
XRCC4-201ENST00000282268 TRIM75PA6NK02 468 aa13.14□□□□□ -0.31
XRCC4-201ENST00000282268 KIF28PB7ZC32 967 aa13.14□□□□□ -0.31
XRCC4-201ENST00000282268 PDIA4P13667 645 aaKnown RBP13.14□□□□□ -0.31
XRCC4-201ENST00000282268 PTPRAP18433 802 aa13.14□□□□□ -0.31
XRCC4-201ENST00000282268 NLRP5P59047 1200 aa13.14□□□□□ -0.31
XRCC4-201ENST00000282268 SPP2Q13103 211 aa13.14□□□□□ -0.31
XRCC4-201ENST00000282268 SAFBQ15424 915 aaKnown RBP eCLIP13.14□□□□□ -0.31
XRCC4-201ENST00000282268 GPATCH4Q5T3I0 446 aaKnown RBP13.14□□□□□ -0.31
XRCC4-201ENST00000282268 SHISA4Q96DD7 197 aa13.14□□□□□ -0.31
XRCC4-201ENST00000282268 VCPKMTQ9H867 229 aa13.14□□□□□ -0.31
XRCC4-201ENST00000282268 TFIP11Q9UBB9 837 aaKnown RBP13.14□□□□□ -0.31
XRCC4-201ENST00000282268 ATP6V1DQ9Y5K8 247 aa13.14□□□□□ -0.31
XRCC4-201ENST00000282268 ZHX2Q9Y6X8 837 aa13.14□□□□□ -0.31
XRCC4-201ENST00000282268 FIBPO43427 364 aa13.13□□□□□ -0.31
XRCC4-201ENST00000282268 MAP3K9P80192 1104 aa13.13□□□□□ -0.31
XRCC4-201ENST00000282268 KIF23Q02241 960 aaPredicted RBP13.13□□□□□ -0.31
XRCC4-201ENST00000282268 CEBPZQ03701 1054 aaKnown RBP13.13□□□□□ -0.31
XRCC4-201ENST00000282268 MTMR2Q13614 643 aa13.13□□□□□ -0.31
XRCC4-201ENST00000282268 WWC2Q6AWC2 1192 aa13.13□□□□□ -0.31
XRCC4-201ENST00000282268 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.13□□□□□ -0.31
XRCC4-201ENST00000282268 GMCL1Q96IK5 515 aa13.13□□□□□ -0.31
XRCC4-201ENST00000282268 SCN4AP35499 1836 aa13.12□□□□□ -0.31
XRCC4-201ENST00000282268 BTBD18B2RXH4 712 aa13.12□□□□□ -0.31
XRCC4-201ENST00000282268 MMP1P03956 469 aa13.12□□□□□ -0.31
XRCC4-201ENST00000282268 IREB2P48200 963 aaKnown RBP13.12□□□□□ -0.31
XRCC4-201ENST00000282268 VGLL4Q14135 290 aa13.12□□□□□ -0.31
XRCC4-201ENST00000282268 DIS3L2Q8IYB7 885 aaKnown RBP13.12□□□□□ -0.31
XRCC4-201ENST00000282268 OXER1Q8TDS5 423 aa13.12□□□□□ -0.31
XRCC4-201ENST00000282268 CNKSR2Q8WXI2 1034 aa13.12□□□□□ -0.31
XRCC4-201ENST00000282268 ZSCAN16Q9H4T2 348 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms