RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 FOXP4Q8IVH2 680 aaPredicted RBP24.14■■□□□ 1.45
YBX3-202ENST00000279550 TRPM4Q8TD43 1214 aa24.14■■□□□ 1.45
YBX3-202ENST00000279550 FOXP1Q9H334 677 aaPredicted RBP24.14■■□□□ 1.45
YBX3-202ENST00000279550 TCP11L1Q9NUJ3 509 aa24.14■■□□□ 1.45
YBX3-202ENST00000279550 SLURP2P0DP57 97 aa24.13■■□□□ 1.45
YBX3-202ENST00000279550 NDUFA8P51970 172 aa24.13■■□□□ 1.45
YBX3-202ENST00000279550 TNFAIP1Q13829 316 aa24.13■■□□□ 1.45
YBX3-202ENST00000279550 TMEM39BQ9GZU3 492 aa24.13■■□□□ 1.45
YBX3-202ENST00000279550 ASTN2O75129 1339 aaPredicted RBP24.13■■□□□ 1.45
YBX3-202ENST00000279550 TNNI2P48788 182 aa24.13■■□□□ 1.45
YBX3-202ENST00000279550 PNMA1Q8ND90 353 aa24.13■■□□□ 1.45
YBX3-202ENST00000279550 NEDD1Q8NHV4 660 aa24.13■■□□□ 1.45
YBX3-202ENST00000279550 PHF20Q9BVI0 1012 aa24.13■■□□□ 1.45
YBX3-202ENST00000279550 HACL1Q9UJ83 578 aa24.13■■□□□ 1.45
YBX3-202ENST00000279550 LMOD1P29536 600 aaPredicted RBP24.12■■□□□ 1.45
YBX3-202ENST00000279550 TRIM34Q9BYJ4 488 aa24.12■■□□□ 1.45
YBX3-202ENST00000279550 PLIN4Q96Q06 1357 aa24.11■■□□□ 1.45
YBX3-202ENST00000279550 FAM196BA6NMK8 535 aa24.11■■□□□ 1.45
YBX3-202ENST00000279550 KINO60870 393 aaKnown RBP24.11■■□□□ 1.45
YBX3-202ENST00000279550 CCDC178Q5BJE1 867 aa24.11■■□□□ 1.45
YBX3-202ENST00000279550 RRAGDQ9NQL2 400 aaPredicted RBP24.11■■□□□ 1.45
YBX3-202ENST00000279550 FAM205CA6NFA0 338 aa24.1■■□□□ 1.45
YBX3-202ENST00000279550 VEGFAP15692 232 aaPredicted RBP24.1■■□□□ 1.45
YBX3-202ENST00000279550 RASA3Q14644 834 aa24.1■■□□□ 1.45
YBX3-202ENST00000279550 GRM4Q14833 912 aa24.1■■□□□ 1.45
YBX3-202ENST00000279550 FAM43AQ8N2R8 423 aa24.1■■□□□ 1.45
YBX3-202ENST00000279550 HERC5Q9UII4 1024 aaKnown RBP24.1■■□□□ 1.45
YBX3-202ENST00000279550 SCAF8Q9UPN6 1271 aaKnown RBP24.1■■□□□ 1.45
YBX3-202ENST00000279550 PPP6R2O75170 966 aa24.1■■□□□ 1.45
YBX3-202ENST00000279550 AKR1B1P15121 316 aa24.1■■□□□ 1.45
YBX3-202ENST00000279550 CMA1P23946 247 aa24.1■■□□□ 1.45
YBX3-202ENST00000279550 NPY5RQ15761 445 aa24.1■■□□□ 1.45
YBX3-202ENST00000279550 SLC35G1Q2M3R5 365 aa24.1■■□□□ 1.45
YBX3-202ENST00000279550 ANO6Q4KMQ2 910 aa24.1■■□□□ 1.45
YBX3-202ENST00000279550 TATDN1Q6P1N9 297 aa24.1■■□□□ 1.45
YBX3-202ENST00000279550 STAG2Q8N3U4 1231 aa24.1■■□□□ 1.45
YBX3-202ENST00000279550 PIBF1Q8WXW3 757 aa24.1■■□□□ 1.45
YBX3-202ENST00000279550 TMEM47Q9BQJ4 181 aa24.1■■□□□ 1.45
YBX3-202ENST00000279550 ADARB2Q9NS39 739 aaKnown RBP24.1■■□□□ 1.45
YBX3-202ENST00000279550 PGAP2Q9UHJ9 254 aa24.1■■□□□ 1.45
YBX3-202ENST00000279550 USP25Q9UHP3 1055 aa24.1■■□□□ 1.45
YBX3-202ENST00000279550 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.09■■□□□ 1.45
YBX3-202ENST00000279550 CTAGE5O15320 804 aa24.09■■□□□ 1.45
YBX3-202ENST00000279550 HIRAP54198 1017 aaPredicted RBP24.09■■□□□ 1.45
YBX3-202ENST00000279550 CDAN1Q8IWY9 1227 aa24.09■■□□□ 1.45
YBX3-202ENST00000279550 TRIM44Q96DX7 344 aaPredicted RBP24.09■■□□□ 1.45
YBX3-202ENST00000279550 L3MBTL3Q96JM7 780 aaPredicted RBP24.09■■□□□ 1.45
YBX3-202ENST00000279550 CCDC17Q96LX7 622 aa24.09■■□□□ 1.45
YBX3-202ENST00000279550 MYH8P13535 1937 aa24.08■■□□□ 1.45
YBX3-202ENST00000279550 PFKFB1P16118 471 aa24.08■■□□□ 1.45
YBX3-202ENST00000279550 EARS2Q5JPH6 523 aaKnown RBP24.08■■□□□ 1.45
YBX3-202ENST00000279550 SHC4Q6S5L8 630 aa24.08■■□□□ 1.45
YBX3-202ENST00000279550 SASS6Q6UVJ0 657 aa24.08■■□□□ 1.45
YBX3-202ENST00000279550 FAM200AQ8TCP9 573 aa24.08■■□□□ 1.45
YBX3-202ENST00000279550 CLIC6Q96NY7 704 aa24.08■■□□□ 1.45
YBX3-202ENST00000279550 MAD2L2Q9UI95 211 aa24.08■■□□□ 1.45
YBX3-202ENST00000279550 GLTPD2A6NH11 291 aa24.07■■□□□ 1.44
YBX3-202ENST00000279550 AP5Z1O43299 807 aa24.07■■□□□ 1.44
YBX3-202ENST00000279550 KIF5BP33176 963 aa24.07■■□□□ 1.44
YBX3-202ENST00000279550 CERKLQ49MI3 558 aaPredicted RBP24.07■■□□□ 1.44
YBX3-202ENST00000279550 ANGEL2Q5VTE6 544 aaKnown RBP24.07■■□□□ 1.44
YBX3-202ENST00000279550 RASGRP2Q7LDG7 609 aa24.07■■□□□ 1.44
YBX3-202ENST00000279550 CEP95Q96GE4 821 aa24.07■■□□□ 1.44
YBX3-202ENST00000279550 SCG2P13521 617 aa24.07■■□□□ 1.44
YBX3-202ENST00000279550 XBP1P17861 261 aa24.07■■□□□ 1.44
YBX3-202ENST00000279550 KRT2P35908 639 aa24.07■■□□□ 1.44
YBX3-202ENST00000279550 NOM1Q5C9Z4 860 aaKnown RBP24.07■■□□□ 1.44
YBX3-202ENST00000279550 APOBEC3FQ8IUX4 373 aaKnown RBP24.07■■□□□ 1.44
YBX3-202ENST00000279550 DEFB129Q9H1M3 183 aa24.07■■□□□ 1.44
YBX3-202ENST00000279550 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.07■■□□□ 1.444e-26■■■□□ 16.2
YBX3-202ENST00000279550 CBX8Q9HC52 389 aa24.07■■□□□ 1.44
YBX3-202ENST00000279550 CABP5Q9NP86 173 aa24.07■■□□□ 1.44
YBX3-202ENST00000279550 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.07■■□□□ 1.44
YBX3-202ENST00000279550 GGA3Q9NZ52 723 aa24.07■■□□□ 1.44
YBX3-202ENST00000279550 STX8Q9UNK0 236 aa24.07■■□□□ 1.44
YBX3-202ENST00000279550 PCDHB6Q9Y5E3 794 aa24.07■■□□□ 1.44
YBX3-202ENST00000279550 ADAMTS3O15072 1205 aa24.06■■□□□ 1.44
YBX3-202ENST00000279550 NOVP48745 357 aa24.06■■□□□ 1.44
YBX3-202ENST00000279550 PFKFB3Q16875 520 aaPredicted RBP24.06■■□□□ 1.44
YBX3-202ENST00000279550 RILPL1Q5EBL4 403 aa24.06■■□□□ 1.44
YBX3-202ENST00000279550 JMYQ8N9B5 988 aa24.06■■□□□ 1.44
YBX3-202ENST00000279550 ERCC4Q92889 916 aaPredicted RBP24.06■■□□□ 1.44
YBX3-202ENST00000279550 TNFRSF25Q93038 417 aa24.06■■□□□ 1.44
YBX3-202ENST00000279550 TEPSINQ96N21 525 aa24.06■■□□□ 1.44
YBX3-202ENST00000279550 MTMR7Q9Y216 660 aa24.06■■□□□ 1.44
YBX3-202ENST00000279550 BAZ2BQ9UIF8 2168 aaKnown RBP24.06■■□□□ 1.44
YBX3-202ENST00000279550 A0A087WWV3 80 aa24.05■■□□□ 1.44
YBX3-202ENST00000279550 IGKV6D-41A0A0C4DH26 115 aa24.05■■□□□ 1.44
YBX3-202ENST00000279550 TBC1D12O60347 775 aa24.05■■□□□ 1.44
YBX3-202ENST00000279550 DNAJC25Q9H1X3 360 aa24.05■■□□□ 1.44
YBX3-202ENST00000279550 MTMR4Q9NYA4 1195 aa24.05■■□□□ 1.44
YBX3-202ENST00000279550 HPSEQ9Y251 543 aa24.05■■□□□ 1.44
YBX3-202ENST00000279550 MPHOSPH10O00566 681 aaKnown RBP24.04■■□□□ 1.44
YBX3-202ENST00000279550 CUTAO60888 179 aa24.04■■□□□ 1.44
YBX3-202ENST00000279550 ATP2B1P20020 1258 aa24.04■■□□□ 1.44
YBX3-202ENST00000279550 RESP18Q5W5W9 173 aa24.04■■□□□ 1.44
YBX3-202ENST00000279550 LUZP1Q86V48 1076 aa24.04■■□□□ 1.44
YBX3-202ENST00000279550 FAM237AA0A1B0GTK4 181 aa24.04■■□□□ 1.44
YBX3-202ENST00000279550 ZNF202O95125 648 aa24.04■■□□□ 1.44
YBX3-202ENST00000279550 MAP3K10Q02779 954 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms