RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 CCDC178Q5BJE1 867 aa7.68□□□□□ -1.18
CD44-204ENST00000279452 CREB3L3Q68CJ9 461 aa7.68□□□□□ -1.18
CD44-204ENST00000279452 KCTD1Q719H9 257 aa7.68□□□□□ -1.18
CD44-204ENST00000279452 RASGRP2Q7LDG7 609 aa7.68□□□□□ -1.18
CD44-204ENST00000279452 CHST3Q7LGC8 479 aa7.68□□□□□ -1.18
CD44-204ENST00000279452 OTOP1Q7RTM1 612 aa7.68□□□□□ -1.18
CD44-204ENST00000279452 GMCL1P1Q8NEA9 526 aa7.68□□□□□ -1.18
CD44-204ENST00000279452 RAET1EQ8TD07 263 aa7.68□□□□□ -1.18
CD44-204ENST00000279452 COA7Q96BR5 231 aa7.68□□□□□ -1.18
CD44-204ENST00000279452 ATG4CQ96DT6 458 aa7.68□□□□□ -1.18
CD44-204ENST00000279452 ZSCAN10Q96SZ4 725 aaPredicted RBP7.68□□□□□ -1.18
CD44-204ENST00000279452 SLF1Q9BQI6 1058 aa7.68□□□□□ -1.18
CD44-204ENST00000279452 FBXO28Q9NVF7 368 aa7.68□□□□□ -1.18
CD44-204ENST00000279452 HOXC10Q9NYD6 342 aa7.68□□□□□ -1.18
CD44-204ENST00000279452 TNKSO95271 1327 aa7.68□□□□□ -1.18
CD44-204ENST00000279452 FRMPD2Q68DX3 1309 aaPredicted RBP7.68□□□□□ -1.18
CD44-204ENST00000279452 MYPNQ86TC9 1320 aa7.68□□□□□ -1.18
CD44-204ENST00000279452 LAMA4Q16363 1823 aa7.68□□□□□ -1.18
CD44-204ENST00000279452 TMEM232C9JQI7 657 aa7.67□□□□□ -1.18
CD44-204ENST00000279452 IFIT3O14879 490 aaKnown RBP7.67□□□□□ -1.18
CD44-204ENST00000279452 DHX16O60231 1041 aaKnown RBP7.67□□□□□ -1.18
CD44-204ENST00000279452 ZBED4O75132 1171 aa7.67□□□□□ -1.18
CD44-204ENST00000279452 MYCP01106 439 aaPredicted RBP7.67□□□□□ -1.18
CD44-204ENST00000279452 ZKSCAN1P17029 563 aaPredicted RBP7.67□□□□□ -1.18
CD44-204ENST00000279452 STAT2P52630 851 aa7.67□□□□□ -1.18
CD44-204ENST00000279452 ERVK-9P63128 1117 aa7.67□□□□□ -1.18
CD44-204ENST00000279452 ERVK-24P63145 666 aa7.67□□□□□ -1.18
CD44-204ENST00000279452 FGD1P98174 961 aa7.67□□□□□ -1.18
CD44-204ENST00000279452 PRKCZQ05513 592 aa7.67□□□□□ -1.18
CD44-204ENST00000279452 PKN2Q16513 984 aaKnown RBP7.67□□□□□ -1.18
CD44-204ENST00000279452 IFIT1BQ5T764 474 aaKnown RBP7.67□□□□□ -1.18
CD44-204ENST00000279452 STOX1Q6ZVD7 989 aa7.67□□□□□ -1.18
CD44-204ENST00000279452 NCAPG2Q86XI2 1143 aa7.67□□□□□ -1.18
CD44-204ENST00000279452 CPXCR1Q8N123 301 aa7.67□□□□□ -1.18
CD44-204ENST00000279452 NKX2-3Q8TAU0 364 aa7.67□□□□□ -1.18
CD44-204ENST00000279452 MKL1Q969V6 931 aa7.67□□□□□ -1.18
CD44-204ENST00000279452 TRIM47Q96LD4 638 aa7.67□□□□□ -1.18
CD44-204ENST00000279452 TMEM47Q9BQJ4 181 aa7.67□□□□□ -1.18
CD44-204ENST00000279452 TXNRD2Q9NNW7 524 aa7.67□□□□□ -1.18
CD44-204ENST00000279452 GPCPD1Q9NPB8 672 aa7.67□□□□□ -1.18
CD44-204ENST00000279452 ZSWIM5Q9P217 1185 aa7.67□□□□□ -1.18
CD44-204ENST00000279452 BIN2Q9UBW5 565 aaPredicted RBP7.67□□□□□ -1.18
CD44-204ENST00000279452 FEM1BQ9UK73 627 aa7.67□□□□□ -1.18
CD44-204ENST00000279452 SYNPO2Q9UMS6 1093 aa7.67□□□□□ -1.18
CD44-204ENST00000279452 PTCH2Q9Y6C5 1203 aa7.67□□□□□ -1.18
CD44-204ENST00000279452 TAF6LQ9Y6J9 622 aa7.67□□□□□ -1.18
CD44-204ENST00000279452 IVNS1ABPQ9Y6Y0 642 aa7.67□□□□□ -1.18
CD44-204ENST00000279452 PTPRFP10586 1907 aa7.67□□□□□ -1.18
CD44-204ENST00000279452 CEP350Q5VT06 3117 aa7.67□□□□□ -1.18
CD44-204ENST00000279452 GREB1LQ9C091 1923 aaPredicted RBP7.66□□□□□ -1.18
CD44-204ENST00000279452 CCDC85CA6NKD9 419 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 GNRH1P01148 92 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 CTGFP29279 349 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 MAPK4P31152 587 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 NT5C2P49902 561 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 WTAPQ15007 396 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 SLC9C1Q4G0N8 1177 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 TMEM67Q5HYA8 995 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 CCDC174Q6PII3 467 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 FBXO46Q6PJ61 603 aaPredicted RBP7.66□□□□□ -1.18
CD44-204ENST00000279452 NFXL1Q6ZNB6 911 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 CYB5R4Q7L1T6 521 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 MB21D1Q8N884 522 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 ENAHQ8N8S7 591 aaPredicted RBP7.66□□□□□ -1.18
CD44-204ENST00000279452 PRPF38AQ8NAV1 312 aaKnown RBP7.66□□□□□ -1.18
CD44-204ENST00000279452 PNMA1Q8ND90 353 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 DCAF4Q8WV16 495 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 ABHD8Q96I13 439 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 GMCL1Q96IK5 515 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 PORCNQ9H237 461 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 TCP11L1Q9NUJ3 509 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 BTBD7Q9P203 1132 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 RBPJLQ9UBG7 517 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 MORF4L1Q9UBU8 362 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 SRRDQ9UH36 339 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 PPP1R9AQ9ULJ8 1098 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 NAP1L2Q9ULW6 460 aaPredicted RBP7.66□□□□□ -1.18
CD44-204ENST00000279452 HPS5Q9UPZ3 1129 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 PTPN22Q9Y2R2 807 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 RABGAP1Q9Y3P9 1069 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 GTF3C3Q9Y5Q9 886 aa7.66□□□□□ -1.18
CD44-204ENST00000279452 CCDC69A6NI79 296 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 ZSWIM8A7E2V4 1837 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 VWA5AO00534 786 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 PRC1O43663 620 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 CNMDO75829 334 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 GOLGA8HP0CJ92 632 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 PDHBP11177 359 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 CYP2B6P20813 491 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 MCM5P33992 734 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 SLC16A2P36021 539 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 FLT3LGP49771 235 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 SNAP25P60880 206 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 CAP1Q01518 475 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 KRT32Q14532 448 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 NECTIN1Q15223 517 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 Q3C1V9 767 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 SNRNP48Q6IEG0 339 aaKnown RBP7.65□□□□□ -1.18
CD44-204ENST00000279452 RCSD1Q6JBY9 416 aa7.65□□□□□ -1.18
CD44-204ENST00000279452 LBX2Q6XYB7 198 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms