RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 GPRC5DQ9NZD1 345 aa13.54□□□□□ -0.24
SSRP1-201ENST00000278412 PARP1P09874 1014 aaKnown RBP13.54□□□□□ -0.24
SSRP1-201ENST00000278412 HEATR3Q7Z4Q2 680 aa13.54□□□□□ -0.24
SSRP1-201ENST00000278412 DEFB129Q9H1M3 183 aa13.54□□□□□ -0.24
SSRP1-201ENST00000278412 GGA3Q9NZ52 723 aa13.54□□□□□ -0.24
SSRP1-201ENST00000278412 PPP1R11O60927 126 aaPredicted RBP13.53□□□□□ -0.24
SSRP1-201ENST00000278412 CALM1P0DP23 149 aa13.53□□□□□ -0.24
SSRP1-201ENST00000278412 CALM2P0DP24 149 aa13.53□□□□□ -0.24
SSRP1-201ENST00000278412 CALM3P0DP25 149 aa13.53□□□□□ -0.24
SSRP1-201ENST00000278412 SCG2P13521 617 aa13.53□□□□□ -0.24
SSRP1-201ENST00000278412 AKAP17AQ02040 695 aaKnown RBP13.53□□□□□ -0.24
SSRP1-201ENST00000278412 GRIN1Q05586 938 aa13.53□□□□□ -0.24
SSRP1-201ENST00000278412 METTL16Q86W50 562 aaKnown RBP13.53□□□□□ -0.24
SSRP1-201ENST00000278412 FOXP4Q8IVH2 680 aaPredicted RBP13.53□□□□□ -0.24
SSRP1-201ENST00000278412 TMEM87AQ8NBN3 555 aa13.53□□□□□ -0.24
SSRP1-201ENST00000278412 RBM28Q9NW13 759 aaKnown RBP13.53□□□□□ -0.24
SSRP1-201ENST00000278412 KIF3AQ9Y496 699 aa13.53□□□□□ -0.24
SSRP1-201ENST00000278412 ATP6V1DQ9Y5K8 247 aa13.53□□□□□ -0.24
SSRP1-201ENST00000278412 DICER1Q9UPY3 1922 aaKnown RBP13.53□□□□□ -0.24
SSRP1-201ENST00000278412 MYO1BO43795 1136 aa13.53□□□□□ -0.24
SSRP1-201ENST00000278412 RCAN1P53805 252 aa13.53□□□□□ -0.24
SSRP1-201ENST00000278412 CCDC96Q2M329 555 aa13.53□□□□□ -0.24
SSRP1-201ENST00000278412 COA7Q96BR5 231 aa13.53□□□□□ -0.24
SSRP1-201ENST00000278412 GOLPH3LQ9H4A5 285 aa13.53□□□□□ -0.24
SSRP1-201ENST00000278412 USP17L10C9JJH3 530 aa13.52□□□□□ -0.24
SSRP1-201ENST00000278412 NPM3O75607 178 aaKnown RBP13.52□□□□□ -0.24
SSRP1-201ENST00000278412 INPP5BP32019 993 aa13.52□□□□□ -0.24
SSRP1-201ENST00000278412 GNL2Q13823 731 aaKnown RBP13.52□□□□□ -0.24
SSRP1-201ENST00000278412 PFKFB3Q16875 520 aaPredicted RBP13.52□□□□□ -0.24
SSRP1-201ENST00000278412 PHF20Q9BVI0 1012 aa13.52□□□□□ -0.24
SSRP1-201ENST00000278412 ZSCAN16Q9H4T2 348 aaPredicted RBP13.52□□□□□ -0.24
SSRP1-201ENST00000278412 CABP5Q9NP86 173 aa13.52□□□□□ -0.24
SSRP1-201ENST00000278412 PCDHB6Q9Y5E3 794 aa13.52□□□□□ -0.24
SSRP1-201ENST00000278412 A0A087WWV3 80 aa13.52□□□□□ -0.25
SSRP1-201ENST00000278412 SYCE3A1L190 88 aa13.52□□□□□ -0.25
SSRP1-201ENST00000278412 TRIM29Q14134 588 aa13.52□□□□□ -0.25
SSRP1-201ENST00000278412 SF3A1Q15459 793 aaKnown RBP13.52□□□□□ -0.25
SSRP1-201ENST00000278412 ZSCAN23Q3MJ62 389 aa13.52□□□□□ -0.25
SSRP1-201ENST00000278412 SPECC1Q5M775 1068 aa13.52□□□□□ -0.25
SSRP1-201ENST00000278412 ERCC4Q92889 916 aaPredicted RBP13.52□□□□□ -0.25
SSRP1-201ENST00000278412 ZMYND15Q9H091 742 aa13.52□□□□□ -0.25
SSRP1-201ENST00000278412 U2AF2P26368 475 aaKnown RBP eCLIP13.51□□□□□ -0.25
SSRP1-201ENST00000278412 KIF5BP33176 963 aa13.51□□□□□ -0.25
SSRP1-201ENST00000278412 GPR162Q16538 588 aa13.51□□□□□ -0.25
SSRP1-201ENST00000278412 CAMK4Q16566 473 aa13.51□□□□□ -0.25
SSRP1-201ENST00000278412 NOSTRINQ8IVI9 506 aa13.51□□□□□ -0.25
SSRP1-201ENST00000278412 DPF2Q92785 391 aa13.51□□□□□ -0.25
SSRP1-201ENST00000278412 CLIC6Q96NY7 704 aa13.51□□□□□ -0.25
SSRP1-201ENST00000278412 NDUFB10O96000 172 aa13.51□□□□□ -0.25
SSRP1-201ENST00000278412 ZNF543Q08ER8 600 aa13.51□□□□□ -0.25
SSRP1-201ENST00000278412 ZKSCAN4Q969J2 545 aaPredicted RBP13.51□□□□□ -0.25
SSRP1-201ENST00000278412 ZBTB21Q9ULJ3 1066 aa13.51□□□□□ -0.25
SSRP1-201ENST00000278412 PHF20L1A8MW92 1017 aa13.5□□□□□ -0.25
SSRP1-201ENST00000278412 F5H6K3 240 aa13.5□□□□□ -0.25
SSRP1-201ENST00000278412 NR1I2O75469 434 aa13.5□□□□□ -0.25
SSRP1-201ENST00000278412 SNHG28P0DPA3 235 aa13.5□□□□□ -0.25
SSRP1-201ENST00000278412 RPS12P25398 132 aaKnown RBP13.5□□□□□ -0.25
SSRP1-201ENST00000278412 KLRC3Q07444 240 aa13.5□□□□□ -0.25
SSRP1-201ENST00000278412 ADGRF4Q8IZF3 695 aa13.5□□□□□ -0.25
SSRP1-201ENST00000278412 GPC2Q8N158 579 aa13.5□□□□□ -0.25
SSRP1-201ENST00000278412 PCDHA7Q9UN72 937 aa13.5□□□□□ -0.25
SSRP1-201ENST00000278412 ME1P48163 572 aa13.5□□□□□ -0.25
SSRP1-201ENST00000278412 UBE2HP62256 183 aa13.5□□□□□ -0.25
SSRP1-201ENST00000278412 SLFN13Q68D06 897 aa13.5□□□□□ -0.25
SSRP1-201ENST00000278412 TMEM179Q6ZVK1 233 aa13.5□□□□□ -0.25
SSRP1-201ENST00000278412 LINC00301Q8NCQ3 95 aa13.5□□□□□ -0.25
SSRP1-201ENST00000278412 MAP3K14Q99558 947 aa13.5□□□□□ -0.25
SSRP1-201ENST00000278412 JMJD4Q9H9V9 463 aa13.5□□□□□ -0.25
SSRP1-201ENST00000278412 ADM5C9JUS6 153 aa13.49□□□□□ -0.25
SSRP1-201ENST00000278412 H7C1D1 291 aa13.49□□□□□ -0.25
SSRP1-201ENST00000278412 STXBP3O00186 592 aa13.49□□□□□ -0.25
SSRP1-201ENST00000278412 NLRP5P59047 1200 aa13.49□□□□□ -0.25
SSRP1-201ENST00000278412 FMR1Q06787 632 aaKnown RBP eCLIP13.49□□□□□ -0.253e-7■■■□□ 17.9
SSRP1-201ENST00000278412 PIK3AP1Q6ZUJ8 805 aa13.49□□□□□ -0.25
SSRP1-201ENST00000278412 FAM83AQ86UY5 434 aa13.49□□□□□ -0.25
SSRP1-201ENST00000278412 CCDC17Q96LX7 622 aa13.49□□□□□ -0.25
SSRP1-201ENST00000278412 KANSL2Q9H9L4 492 aa13.49□□□□□ -0.25
SSRP1-201ENST00000278412 TMEM260Q9NX78 707 aa13.49□□□□□ -0.25
SSRP1-201ENST00000278412 ANO1Q5XXA6 986 aa13.49□□□□□ -0.25
SSRP1-201ENST00000278412 TNFRSF25Q93038 417 aa13.49□□□□□ -0.25
SSRP1-201ENST00000278412 UIMC1Q96RL1 719 aa13.49□□□□□ -0.25
SSRP1-201ENST00000278412 RCOR1Q9UKL0 485 aa13.49□□□□□ -0.25
SSRP1-201ENST00000278412 POTEIP0CG38 1075 aa13.49□□□□□ -0.25
SSRP1-201ENST00000278412 POTEJP0CG39 1038 aa13.49□□□□□ -0.25
SSRP1-201ENST00000278412 SLC1A4P43007 532 aa13.49□□□□□ -0.25
SSRP1-201ENST00000278412 PTPAQ15257 358 aa13.49□□□□□ -0.25
SSRP1-201ENST00000278412 FBXO28Q9NVF7 368 aa13.49□□□□□ -0.25
SSRP1-201ENST00000278412 A0A1B0GVL5 298 aa13.48□□□□□ -0.25
SSRP1-201ENST00000278412 CAP2P40123 477 aa13.48□□□□□ -0.25
SSRP1-201ENST00000278412 BICD2Q8TD16 824 aa13.48□□□□□ -0.25
SSRP1-201ENST00000278412 WASF1Q92558 559 aa13.48□□□□□ -0.25
SSRP1-201ENST00000278412 SCAND2PQ9GZW5 306 aaPredicted RBP13.48□□□□□ -0.25
SSRP1-201ENST00000278412 DACT1Q9NYF0 836 aa13.48□□□□□ -0.25
SSRP1-201ENST00000278412 HERC5Q9UII4 1024 aaKnown RBP13.48□□□□□ -0.25
SSRP1-201ENST00000278412 SSC5DA1L4H1 1573 aa13.48□□□□□ -0.25
SSRP1-201ENST00000278412 PPP2R5BQ15173 497 aa13.48□□□□□ -0.25
SSRP1-201ENST00000278412 STK38Q15208 465 aa13.48□□□□□ -0.25
SSRP1-201ENST00000278412 CCDC178Q5BJE1 867 aa13.48□□□□□ -0.25
SSRP1-201ENST00000278412 MOB2Q70IA6 237 aa13.48□□□□□ -0.25
SSRP1-201ENST00000278412 RTEL1Q9NZ71 1219 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms