RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 MAP2K7O14733 419 aa11.76□□□□□ -0.53
UPF3B-201ENST00000276201 RPS6KA5O75582 802 aa11.76□□□□□ -0.53
UPF3B-201ENST00000276201 PFKFB1P16118 471 aa11.76□□□□□ -0.53
UPF3B-201ENST00000276201 HDLBPQ00341 1268 aaKnown RBP11.76□□□□□ -0.53
UPF3B-201ENST00000276201 TTC39AQ5SRH9 613 aa11.76□□□□□ -0.53
UPF3B-201ENST00000276201 CARD6Q9BX69 1037 aa11.76□□□□□ -0.53
UPF3B-201ENST00000276201 FEZ2Q9UHY8 353 aaPredicted RBP11.76□□□□□ -0.53
UPF3B-201ENST00000276201 PPP2R2CQ9Y2T4 447 aa11.76□□□□□ -0.53
UPF3B-201ENST00000276201 CEP350Q5VT06 3117 aa11.76□□□□□ -0.53
UPF3B-201ENST00000276201 AKAP11Q9UKA4 1901 aa11.76□□□□□ -0.53
UPF3B-201ENST00000276201 CELF2O95319 508 aaKnown RBP11.76□□□□□ -0.53
UPF3B-201ENST00000276201 HSPD1P10809 573 aaKnown RBP11.76□□□□□ -0.53
UPF3B-201ENST00000276201 CT47A1Q5JQC4 288 aaPredicted RBP11.76□□□□□ -0.53
UPF3B-201ENST00000276201 GOLGA5Q8TBA6 731 aa11.76□□□□□ -0.53
UPF3B-201ENST00000276201 TEKT1Q969V4 418 aa11.76□□□□□ -0.53
UPF3B-201ENST00000276201 ZNF512BQ96KM6 892 aaPredicted RBP11.76□□□□□ -0.53
UPF3B-201ENST00000276201 SEC62Q99442 399 aaKnown RBP11.76□□□□□ -0.53
UPF3B-201ENST00000276201 ARFGAP3Q9NP61 516 aa11.76□□□□□ -0.53
UPF3B-201ENST00000276201 CLRN2A0PK11 232 aa11.75□□□□□ -0.53
UPF3B-201ENST00000276201 FANCGO15287 622 aa11.75□□□□□ -0.53
UPF3B-201ENST00000276201 RNF113AO15541 343 aaKnown RBP11.75□□□□□ -0.53
UPF3B-201ENST00000276201 URI1O94763 535 aaPredicted RBP11.75□□□□□ -0.53
UPF3B-201ENST00000276201 LDHBP07195 334 aaKnown RBP11.75□□□□□ -0.53
UPF3B-201ENST00000276201 TOP1P11387 765 aaKnown RBP11.75□□□□□ -0.53
UPF3B-201ENST00000276201 CASQ1P31415 396 aa11.75□□□□□ -0.53
UPF3B-201ENST00000276201 KIF23Q02241 960 aaPredicted RBP11.75□□□□□ -0.53
UPF3B-201ENST00000276201 RAD51AP2Q09MP3 1159 aa11.75□□□□□ -0.53
UPF3B-201ENST00000276201 SMC1AQ14683 1233 aaKnown RBP11.75□□□□□ -0.53
UPF3B-201ENST00000276201 SYNE3Q6ZMZ3 975 aa11.75□□□□□ -0.53
UPF3B-201ENST00000276201 DNAJC5GQ8N7S2 189 aa11.75□□□□□ -0.53
UPF3B-201ENST00000276201 KIFC2Q96AC6 838 aa11.75□□□□□ -0.53
UPF3B-201ENST00000276201 CDCA5Q96FF9 252 aa11.75□□□□□ -0.53
UPF3B-201ENST00000276201 MRIQ9BWK5 157 aa11.75□□□□□ -0.53
UPF3B-201ENST00000276201 FUT8Q9BYC5 575 aa11.75□□□□□ -0.53
UPF3B-201ENST00000276201 LRRC2Q9BYS8 371 aa11.75□□□□□ -0.53
UPF3B-201ENST00000276201 ZNF408Q9H9D4 720 aa11.75□□□□□ -0.53
UPF3B-201ENST00000276201 PAG1Q9NWQ8 432 aa11.75□□□□□ -0.53
UPF3B-201ENST00000276201 A0A087WWV3 80 aa11.75□□□□□ -0.53
UPF3B-201ENST00000276201 TUBBP07437 444 aa11.75□□□□□ -0.53
UPF3B-201ENST00000276201 OAS2P29728 719 aaKnown RBP11.75□□□□□ -0.53
UPF3B-201ENST00000276201 USP5P45974 858 aa11.75□□□□□ -0.53
UPF3B-201ENST00000276201 CCT2P78371 535 aaKnown RBP11.75□□□□□ -0.53
UPF3B-201ENST00000276201 DIXDC1Q155Q3 683 aa11.75□□□□□ -0.53
UPF3B-201ENST00000276201 SPDYE2Q495Y8 402 aa11.75□□□□□ -0.53
UPF3B-201ENST00000276201 APOBEC3FQ8IUX4 373 aaKnown RBP11.75□□□□□ -0.53
UPF3B-201ENST00000276201 GOLGA1Q92805 767 aa11.75□□□□□ -0.53
UPF3B-201ENST00000276201 ZDHHC15Q96MV8 337 aa11.75□□□□□ -0.53
UPF3B-201ENST00000276201 EFCC1Q9HA90 598 aa11.75□□□□□ -0.53
UPF3B-201ENST00000276201 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.75□□□□□ -0.53
UPF3B-201ENST00000276201 ABCF2Q9UG63 623 aa11.75□□□□□ -0.53
UPF3B-201ENST00000276201 SASH3O75995 380 aa11.74□□□□□ -0.53
UPF3B-201ENST00000276201 SYKP43405 635 aa11.74□□□□□ -0.53
UPF3B-201ENST00000276201 PPP2R3AQ06190 1150 aa11.74□□□□□ -0.53
UPF3B-201ENST00000276201 RESP18Q5W5W9 173 aa11.74□□□□□ -0.53
UPF3B-201ENST00000276201 HHIPL2Q6UWX4 724 aa11.74□□□□□ -0.53
UPF3B-201ENST00000276201 TDRD3Q9H7E2 651 aaKnown RBP11.74□□□□□ -0.53
UPF3B-201ENST00000276201 NCOA5Q9HCD5 579 aaKnown RBP11.74□□□□□ -0.53
UPF3B-201ENST00000276201 ZNF70Q9UC06 446 aaPredicted RBP11.74□□□□□ -0.53
UPF3B-201ENST00000276201 RAB21Q9UL25 225 aa11.74□□□□□ -0.53
UPF3B-201ENST00000276201 CUTAO60888 179 aa11.74□□□□□ -0.53
UPF3B-201ENST00000276201 ZFYP08048 801 aaPredicted RBP11.74□□□□□ -0.53
UPF3B-201ENST00000276201 TXLNAP40222 546 aa11.74□□□□□ -0.53
UPF3B-201ENST00000276201 PRAMEF18Q5VWM3 479 aa11.74□□□□□ -0.53
UPF3B-201ENST00000276201 APOBEC3HQ6NTF7 200 aaKnown RBP11.74□□□□□ -0.53
UPF3B-201ENST00000276201 MB21D2Q8IYB1 491 aaPredicted RBP11.74□□□□□ -0.53
UPF3B-201ENST00000276201 HPS5Q9UPZ3 1129 aa11.74□□□□□ -0.53
UPF3B-201ENST00000276201 DAGLAQ9Y4D2 1042 aa11.74□□□□□ -0.53
UPF3B-201ENST00000276201 ZAP70P43403 619 aa11.73□□□□□ -0.53
UPF3B-201ENST00000276201 PTPAQ15257 358 aa11.73□□□□□ -0.53
UPF3B-201ENST00000276201 NT5DC1Q5TFE4 455 aa11.73□□□□□ -0.53
UPF3B-201ENST00000276201 SPTY2D1Q68D10 685 aaPredicted RBP11.73□□□□□ -0.53
UPF3B-201ENST00000276201 CTR9Q6PD62 1173 aa11.73□□□□□ -0.53
UPF3B-201ENST00000276201 MSANTD4Q8NCY6 345 aa11.73□□□□□ -0.53
UPF3B-201ENST00000276201 ZNF384Q8TF68 577 aa11.73□□□□□ -0.53
UPF3B-201ENST00000276201 SMARCE1Q969G3 411 aa11.73□□□□□ -0.53
UPF3B-201ENST00000276201 VEZTQ9HBM0 779 aa11.73□□□□□ -0.53
UPF3B-201ENST00000276201 MROH7-TTC4A0A0A0MT08 1334 aa11.73□□□□□ -0.53
UPF3B-201ENST00000276201 SERPINC1P01008 464 aa11.72□□□□□ -0.53
UPF3B-201ENST00000276201 ZNF18P17022 549 aa11.72□□□□□ -0.53
UPF3B-201ENST00000276201 MECOMQ03112 1051 aa11.72□□□□□ -0.53
UPF3B-201ENST00000276201 DZIP1Q86YF9 867 aaKnown RBP11.72□□□□□ -0.53
UPF3B-201ENST00000276201 TRIML1Q8N9V2 468 aa11.72□□□□□ -0.53
UPF3B-201ENST00000276201 BAG1Q99933 345 aaPredicted RBP11.72□□□□□ -0.53
UPF3B-201ENST00000276201 NAA15Q9BXJ9 866 aaKnown RBP11.72□□□□□ -0.53
UPF3B-201ENST00000276201 DACH1Q9UI36 760 aa11.72□□□□□ -0.53
UPF3B-201ENST00000276201 ABT1Q9ULW3 272 aaKnown RBP11.72□□□□□ -0.53
UPF3B-201ENST00000276201 TLL2Q9Y6L7 1015 aa11.72□□□□□ -0.53
UPF3B-201ENST00000276201 CNTNAP1P78357 1384 aa11.72□□□□□ -0.53
UPF3B-201ENST00000276201 MYH2Q9UKX2 1941 aa11.72□□□□□ -0.53
UPF3B-201ENST00000276201 WDHD1O75717 1129 aaPredicted RBP11.72□□□□□ -0.53
UPF3B-201ENST00000276201 ATP1A3P13637 1013 aa11.72□□□□□ -0.53
UPF3B-201ENST00000276201 ENOX1Q8TC92 643 aaKnown RBP11.72□□□□□ -0.53
UPF3B-201ENST00000276201 ERCC4Q92889 916 aaPredicted RBP11.72□□□□□ -0.53
UPF3B-201ENST00000276201 KLRG1Q96E93 195 aa11.72□□□□□ -0.53
UPF3B-201ENST00000276201 PANX2Q96RD6 677 aa11.72□□□□□ -0.53
UPF3B-201ENST00000276201 DEFB129Q9H1M3 183 aa11.72□□□□□ -0.53
UPF3B-201ENST00000276201 MKRN1Q9UHC7 482 aaKnown RBP11.72□□□□□ -0.53
UPF3B-201ENST00000276201 HOOK1Q9UJC3 728 aaKnown RBP11.72□□□□□ -0.53
UPF3B-201ENST00000276201 NDUFB9Q9Y6M9 179 aa11.72□□□□□ -0.53
UPF3B-201ENST00000276201 GAKO14976 1311 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms