RNA–Protein interactions for RNA: ENST00000275080.11

CD164-201, Transcript of CD164 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD164, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-201ENST00000275080 CTCFLQ8NI51 663 aaPredicted RBP10.31□□□□□ -0.76
CD164-201ENST00000275080 TRIM47Q96LD4 638 aa10.31□□□□□ -0.76
CD164-201ENST00000275080 AGPAT5Q9NUQ2 364 aa10.31□□□□□ -0.76
CD164-201ENST00000275080 GNL3LQ9NVN8 582 aaKnown RBP10.31□□□□□ -0.76
CD164-201ENST00000275080 MCM9Q9NXL9 1143 aa10.31□□□□□ -0.76
CD164-201ENST00000275080 SAP30BPQ9UHR5 308 aaKnown RBP10.31□□□□□ -0.76
CD164-201ENST00000275080 UBR2Q8IWV8 1755 aa10.3□□□□□ -0.76
CD164-201ENST00000275080 A0A1B0GTH6 734 aa10.3□□□□□ -0.76
CD164-201ENST00000275080 TTC26A0AVF1 554 aa10.3□□□□□ -0.76
CD164-201ENST00000275080 B4DLN1 442 aa10.3□□□□□ -0.76
CD164-201ENST00000275080 KCNJ18B7U540 433 aa10.3□□□□□ -0.76
CD164-201ENST00000275080 PPP1R3GB7ZBB8 358 aa10.3□□□□□ -0.76
CD164-201ENST00000275080 USP17L8P0C7I0 530 aa10.3□□□□□ -0.76
CD164-201ENST00000275080 SARSP49591 514 aaKnown RBP10.3□□□□□ -0.76
CD164-201ENST00000275080 KCNJ12Q14500 433 aa10.3□□□□□ -0.76
CD164-201ENST00000275080 HSP90B2PQ58FF3 399 aa10.3□□□□□ -0.76
CD164-201ENST00000275080 BRMS1Q9HCU9 246 aa10.3□□□□□ -0.76
CD164-201ENST00000275080 EHD2Q9NZN4 543 aa10.3□□□□□ -0.76
CD164-201ENST00000275080 XDHP47989 1333 aa10.3□□□□□ -0.76
CD164-201ENST00000275080 USP17L3A6NCW0 530 aa10.3□□□□□ -0.76
CD164-201ENST00000275080 USP17L4A6NCW7 530 aa10.3□□□□□ -0.76
CD164-201ENST00000275080 IL17AQ16552 155 aa10.3□□□□□ -0.76
CD164-201ENST00000275080 TSR1Q2NL82 804 aaKnown RBP10.3□□□□□ -0.76
CD164-201ENST00000275080 USP17L1Q7RTZ2 530 aa10.3□□□□□ -0.76
CD164-201ENST00000275080 DHX37Q8IY37 1157 aaKnown RBP10.3□□□□□ -0.76
CD164-201ENST00000275080 GJA10Q969M2 543 aa10.3□□□□□ -0.76
CD164-201ENST00000275080 CDC23Q9UJX2 597 aa10.3□□□□□ -0.76
CD164-201ENST00000275080 EXOC5O00471 708 aa10.29□□□□□ -0.76
CD164-201ENST00000275080 ARID4AP29374 1257 aaPredicted RBP10.29□□□□□ -0.76
CD164-201ENST00000275080 EIF6P56537 245 aaKnown RBP10.29□□□□□ -0.76
CD164-201ENST00000275080 SLC7A5Q01650 507 aa10.29□□□□□ -0.76
CD164-201ENST00000275080 ARID5AQ03989 594 aa10.29□□□□□ -0.76
CD164-201ENST00000275080 PAK1Q13153 545 aa10.29□□□□□ -0.76
CD164-201ENST00000275080 FBXL16Q8N461 479 aa10.29□□□□□ -0.76
CD164-201ENST00000275080 RABGGTAQ92696 567 aa10.29□□□□□ -0.76
CD164-201ENST00000275080 SLAIN2Q9P270 581 aa10.29□□□□□ -0.76
CD164-201ENST00000275080 PAPPAQ13219 1627 aa10.29□□□□□ -0.76
CD164-201ENST00000275080 KCNQ2O43526 872 aa10.29□□□□□ -0.76
CD164-201ENST00000275080 PLEKP08567 350 aaPredicted RBP10.29□□□□□ -0.76
CD164-201ENST00000275080 NKX1-1Q15270 411 aaPredicted RBP10.29□□□□□ -0.76
CD164-201ENST00000275080 RSRC2Q7L4I2 434 aaKnown RBP10.29□□□□□ -0.76
CD164-201ENST00000275080 IQUBQ8NA54 791 aa10.29□□□□□ -0.76
CD164-201ENST00000275080 RNF41Q9H4P4 317 aaPredicted RBP10.29□□□□□ -0.76
CD164-201ENST00000275080 ABHD10Q9NUJ1 306 aa10.29□□□□□ -0.76
CD164-201ENST00000275080 NUP188Q5SRE5 1749 aa10.29□□□□□ -0.76
CD164-201ENST00000275080 ABCA3Q99758 1704 aa10.29□□□□□ -0.76
CD164-201ENST00000275080 LRRIQ3A6PVS8 624 aaPredicted RBP10.29□□□□□ -0.76
CD164-201ENST00000275080 ATP1A1P05023 1023 aaKnown RBP10.29□□□□□ -0.76
CD164-201ENST00000275080 COPB1P53618 953 aaKnown RBP10.29□□□□□ -0.76
CD164-201ENST00000275080 LETM2Q2VYF4 491 aa10.29□□□□□ -0.76
CD164-201ENST00000275080 DYMQ7RTS9 669 aa10.29□□□□□ -0.76
CD164-201ENST00000275080 APTXQ7Z2E3 356 aaKnown RBP10.29□□□□□ -0.76
CD164-201ENST00000275080 STAG1Q8WVM7 1258 aa10.29□□□□□ -0.76
CD164-201ENST00000275080 MMS19Q96T76 1030 aa10.29□□□□□ -0.76
CD164-201ENST00000275080 NAPGQ99747 312 aaPredicted RBP10.29□□□□□ -0.76
CD164-201ENST00000275080 FAM207AQ9NSI2 230 aaPredicted RBP10.29□□□□□ -0.76
CD164-201ENST00000275080 FAM53CQ9NYF3 392 aa10.29□□□□□ -0.76
CD164-201ENST00000275080 MYO5AQ9Y4I1 1855 aaKnown RBP10.28□□□□□ -0.76
CD164-201ENST00000275080 IDEP14735 1019 aa10.28□□□□□ -0.76
CD164-201ENST00000275080 UBA7P41226 1012 aa10.28□□□□□ -0.76
CD164-201ENST00000275080 CRKLP46109 303 aaKnown RBP10.28□□□□□ -0.76
CD164-201ENST00000275080 SF3A3Q12874 501 aaKnown RBP eCLIP10.28□□□□□ -0.76
CD164-201ENST00000275080 DIXDC1Q155Q3 683 aa10.28□□□□□ -0.76
CD164-201ENST00000275080 PROCA1Q8NCQ7 364 aaPredicted RBP10.28□□□□□ -0.76
CD164-201ENST00000275080 ANKRD20A12PQ8NF67 263 aa10.28□□□□□ -0.76
CD164-201ENST00000275080 CELF1Q92879 486 aaKnown RBP10.28□□□□□ -0.76
CD164-201ENST00000275080 CARD10Q9BWT7 1032 aa10.28□□□□□ -0.76
CD164-201ENST00000275080 TMEM60Q9H2L4 133 aa10.28□□□□□ -0.76
CD164-201ENST00000275080 KCPQ6ZWJ8 1503 aa10.28□□□□□ -0.76
CD164-201ENST00000275080 SSBP05455 408 aaKnown RBP eCLIP10.28□□□□□ -0.76
CD164-201ENST00000275080 IBSPP21815 317 aaPredicted RBP10.28□□□□□ -0.76
CD164-201ENST00000275080 CASP8Q14790 479 aa10.28□□□□□ -0.76
CD164-201ENST00000275080 ERFEQ4G0M1 354 aa10.28□□□□□ -0.76
CD164-201ENST00000275080 CCDC152Q4G0S7 254 aa10.28□□□□□ -0.76
CD164-201ENST00000275080 KANK3Q6NY19 840 aa10.28□□□□□ -0.76
CD164-201ENST00000275080 LEKR1Q6ZMV7 388 aa10.28□□□□□ -0.76
CD164-201ENST00000275080 TXNRD3Q86VQ6 643 aa10.28□□□□□ -0.76
CD164-201ENST00000275080 DNAAF5Q86Y56 855 aa10.28□□□□□ -0.76
CD164-201ENST00000275080 AK7Q96M32 723 aa10.28□□□□□ -0.76
CD164-201ENST00000275080 LACRTQ9GZZ8 138 aa10.28□□□□□ -0.76
CD164-201ENST00000275080 EHD4Q9H223 541 aa10.28□□□□□ -0.76
CD164-201ENST00000275080 MYO6Q9UM54 1294 aa10.28□□□□□ -0.76
CD164-201ENST00000275080 LUC7L2Q9Y383 392 aaKnown RBP10.28□□□□□ -0.76
CD164-201ENST00000275080 EPN1Q9Y6I3 576 aaPredicted RBP10.28□□□□□ -0.76
CD164-201ENST00000275080 FAM205AQ6ZU69 1335 aa10.28□□□□□ -0.76
CD164-201ENST00000275080 COL5A2P05997 1499 aaPredicted RBP10.28□□□□□ -0.76
CD164-201ENST00000275080 GOLGA6L9A6NEM1 432 aa10.27□□□□□ -0.76
CD164-201ENST00000275080 RPN1P04843 607 aaKnown RBP10.27□□□□□ -0.76
CD164-201ENST00000275080 PARP1P09874 1014 aaKnown RBP10.27□□□□□ -0.76
CD164-201ENST00000275080 FCER1AP12319 257 aa10.27□□□□□ -0.76
CD164-201ENST00000275080 FGFR2P21802 821 aa10.27□□□□□ -0.76
CD164-201ENST00000275080 TFAP4Q01664 338 aa10.27□□□□□ -0.76
CD164-201ENST00000275080 C2orf54Q08AI8 447 aa10.27□□□□□ -0.76
CD164-201ENST00000275080 TRIM28Q13263 835 aaKnown RBP10.27□□□□□ -0.76
CD164-201ENST00000275080 EZH2Q15910 746 aaKnown RBP10.27□□□□□ -0.76
CD164-201ENST00000275080 CAVIN4Q5BKX8 364 aa10.27□□□□□ -0.76
CD164-201ENST00000275080 TCP11X2Q5H9J9 407 aa10.27□□□□□ -0.76
CD164-201ENST00000275080 BEND6Q5SZJ8 279 aaPredicted RBP10.27□□□□□ -0.76
CD164-201ENST00000275080 CTR9Q6PD62 1173 aa10.27□□□□□ -0.76
CD164-201ENST00000275080 CNGA4Q8IV77 575 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms