RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 LMNB1P20700 586 aa8.77□□□□□ -1.01
LIMD1-201ENST00000273317 C2CD5Q86YS7 1000 aa8.77□□□□□ -1.01
LIMD1-201ENST00000273317 ZC3H15Q8WU90 426 aaKnown RBP8.77□□□□□ -1.01
LIMD1-201ENST00000273317 AZI2Q9H6S1 392 aa8.77□□□□□ -1.01
LIMD1-201ENST00000273317 TXLNGQ9NUQ3 528 aa8.77□□□□□ -1.01
LIMD1-201ENST00000273317 CAPN7Q9Y6W3 813 aa8.77□□□□□ -1.01
LIMD1-201ENST00000273317 KDRP35968 1356 aa8.77□□□□□ -1.01
LIMD1-201ENST00000273317 ATF7P17544 494 aaPredicted RBP8.77□□□□□ -1.01
LIMD1-201ENST00000273317 TCP1P17987 556 aaKnown RBP8.77□□□□□ -1.01
LIMD1-201ENST00000273317 GNGT1P63211 74 aa8.77□□□□□ -1.01
LIMD1-201ENST00000273317 GPCPD1Q9NPB8 672 aa8.77□□□□□ -1.01
LIMD1-201ENST00000273317 RLBP1P12271 317 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 MTHFSDQ2M296 383 aaKnown RBP8.76□□□□□ -1.01
LIMD1-201ENST00000273317 KRT40Q6A162 431 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 RRAGAQ7L523 313 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 DIS3L2Q8IYB7 885 aaKnown RBP8.76□□□□□ -1.01
LIMD1-201ENST00000273317 KBTBD3Q8NAB2 608 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 EPS15L1Q9UBC2 864 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 SH3TC1Q8TE82 1336 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 ATP10DQ9P241 1426 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 WDR46O15213 610 aaKnown RBP8.76□□□□□ -1.01
LIMD1-201ENST00000273317 ADALQ6DHV7 355 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 NCAPH2Q6IBW4 605 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 TYW1BQ6NUM6 668 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 NOC2LQ9Y3T9 749 aaKnown RBP8.76□□□□□ -1.01
LIMD1-201ENST00000273317 SUN1O94901 812 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 GARSP41250 739 aaKnown RBP8.76□□□□□ -1.01
LIMD1-201ENST00000273317 RPS6KA2Q15349 733 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 TRIM11Q96F44 468 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 C16orf71Q8IYS4 520 aaPredicted RBP8.76□□□□□ -1.01
LIMD1-201ENST00000273317 STAG1Q8WVM7 1258 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 ARPP21Q9UBL0 812 aaPredicted RBP8.76□□□□□ -1.01
LIMD1-201ENST00000273317 ARHGEF5Q12774 1597 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 ARHGAP42A6NI28 874 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 TBC1D22AQ8WUA7 517 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 CCDC93Q567U6 631 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 HARSP12081 509 aaKnown RBP8.76□□□□□ -1.01
LIMD1-201ENST00000273317 ATF2P15336 505 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 RNASE9P60153 205 aaKnown RBP8.76□□□□□ -1.01
LIMD1-201ENST00000273317 BEND3Q5T5X7 828 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 RINT1Q6NUQ1 792 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 ANKRD20A4Q4UJ75 823 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 ANKRD20A8PQ5CZ79 823 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 ANKRD20A2Q5SQ80 823 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 ANKRD20A1Q5TYW2 823 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 OTUD6AQ7L8S5 288 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 TRIM50Q86XT4 487 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 PCDHB13Q9Y5F0 798 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 MED23Q9ULK4 1368 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 ASXL2Q76L83 1435 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 CDC37L1Q7L3B6 337 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 NOSTRINQ8IVI9 506 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 XPO4Q9C0E2 1151 aaKnown RBP8.76□□□□□ -1.01
LIMD1-201ENST00000273317 AFG3L2Q9Y4W6 797 aa8.76□□□□□ -1.01
LIMD1-201ENST00000273317 STAT1P42224 750 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 FAM81BQ96LP2 452 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 V9GY48 417 aaPredicted RBP8.75□□□□□ -1.01
LIMD1-201ENST00000273317 GCKP35557 465 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 PALM2Q8IXS6 379 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 CCHCR1Q8TD31 782 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 XAGE2Q96GT9 111 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 C1orf112Q9NSG2 853 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 POLKQ9UBT6 870 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 PPP2R2CQ9Y2T4 447 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 MYH9P35579 1960 aaKnown RBP8.75□□□□□ -1.01
LIMD1-201ENST00000273317 PHLPP2Q6ZVD8 1323 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 UFL1O94874 794 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 CWF19L2Q2TBE0 894 aaKnown RBP8.75□□□□□ -1.01
LIMD1-201ENST00000273317 FBXO31Q5XUX0 539 aaPredicted RBP8.75□□□□□ -1.01
LIMD1-201ENST00000273317 CABP7Q86V35 215 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 RIOK1Q9BRS2 568 aaKnown RBP8.75□□□□□ -1.01
LIMD1-201ENST00000273317 TRIM35Q9UPQ4 493 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 ADGRL2O95490 1459 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 LAD1O00515 517 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 GTPBP6O43824 516 aaPredicted RBP8.75□□□□□ -1.01
LIMD1-201ENST00000273317 OPHN1O60890 802 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 RXRAP19793 462 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 ABCD1P33897 745 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 SLC1A4P43007 532 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 PROCA1Q8NCQ7 364 aaPredicted RBP8.75□□□□□ -1.01
LIMD1-201ENST00000273317 PCP11498 1178 aaKnown RBP8.75□□□□□ -1.01
LIMD1-201ENST00000273317 DDB1Q16531 1140 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 FBXO41Q8TF61 875 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 HAUS4Q9H6D7 363 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 BAG5Q9UL15 447 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 TPCN1Q9ULQ1 816 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 TPX2Q9ULW0 747 aaKnown RBP8.75□□□□□ -1.01
LIMD1-201ENST00000273317 ADCY8P40145 1251 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 RBM6P78332 1123 aaKnown RBP8.75□□□□□ -1.01
LIMD1-201ENST00000273317 ASPHQ12797 758 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 ZNF274Q96GC6 653 aaPredicted RBP8.75□□□□□ -1.01
LIMD1-201ENST00000273317 M0QZ92 97 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 PRPF6O94906 941 aaKnown RBP8.75□□□□□ -1.01
LIMD1-201ENST00000273317 PDE6CP51160 858 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 RBBP5Q15291 538 aaKnown RBP8.75□□□□□ -1.01
LIMD1-201ENST00000273317 IP6K1Q92551 441 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 CD2APQ9Y5K6 639 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 TTC37Q6PGP7 1564 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 H7C1D1 291 aa8.75□□□□□ -1.01
LIMD1-201ENST00000273317 IL9RQ01113 521 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms