RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 FGD1P98174 961 aa28.75■■■□□ 2.19
SSBP4-201ENST00000270061 SLC9C1Q4G0N8 1177 aa28.75■■■□□ 2.19
SSBP4-201ENST00000270061 BRF1Q92994 677 aa28.75■■■□□ 2.19
SSBP4-201ENST00000270061 GBP4Q96PP9 640 aa28.75■■■□□ 2.19
SSBP4-201ENST00000270061 EVCP57679 992 aa28.75■■■□□ 2.19
SSBP4-201ENST00000270061 ZDHHC9Q9Y397 364 aa28.75■■■□□ 2.19
SSBP4-201ENST00000270061 PKP1Q13835 747 aa28.74■■■□□ 2.19
SSBP4-201ENST00000270061 P2RX7Q99572 595 aaKnown RBP28.74■■■□□ 2.19
SSBP4-201ENST00000270061 LRRC2Q9BYS8 371 aa28.74■■■□□ 2.19
SSBP4-201ENST00000270061 BRD1O95696 1058 aa28.73■■■□□ 2.19
SSBP4-201ENST00000270061 NBPF11Q86T75 865 aa28.73■■■□□ 2.19
SSBP4-201ENST00000270061 NECAB1Q8N987 351 aa28.73■■■□□ 2.19
SSBP4-201ENST00000270061 ARMC5Q96C12 935 aa28.73■■■□□ 2.19
SSBP4-201ENST00000270061 ANAPC4Q9UJX5 808 aa28.73■■■□□ 2.19
SSBP4-201ENST00000270061 MYPNQ86TC9 1320 aa28.73■■■□□ 2.19
SSBP4-201ENST00000270061 HERVK_113P62684 666 aa28.73■■■□□ 2.19
SSBP4-201ENST00000270061 GTF3C6Q969F1 213 aa28.73■■■□□ 2.19
SSBP4-201ENST00000270061 ZNF274Q96GC6 653 aaPredicted RBP28.73■■■□□ 2.19
SSBP4-201ENST00000270061 CNNM2Q9H8M5 875 aa28.73■■■□□ 2.19
SSBP4-201ENST00000270061 ROBO3Q96MS0 1386 aa28.72■■■□□ 2.19
SSBP4-201ENST00000270061 PRC1O43663 620 aa28.72■■■□□ 2.19
SSBP4-201ENST00000270061 PFKFB2O60825 505 aa28.72■■■□□ 2.19
SSBP4-201ENST00000270061 VCAM1P19320 739 aa28.72■■■□□ 2.19
SSBP4-201ENST00000270061 AKNAD1Q5T1N1 836 aa28.72■■■□□ 2.19
SSBP4-201ENST00000270061 STAG1Q8WVM7 1258 aa28.72■■■□□ 2.19
SSBP4-201ENST00000270061 A0A1W2PRG0 241 aa28.71■■■□□ 2.19
SSBP4-201ENST00000270061 TNPO2O14787 897 aaKnown RBP28.71■■■□□ 2.19
SSBP4-201ENST00000270061 ANTXR2P58335 489 aa28.71■■■□□ 2.19
SSBP4-201ENST00000270061 ICA1Q05084 483 aa28.71■■■□□ 2.19
SSBP4-201ENST00000270061 STK11IPQ8N1F8 1099 aa28.71■■■□□ 2.19
SSBP4-201ENST00000270061 RAET1EQ8TD07 263 aa28.71■■■□□ 2.19
SSBP4-201ENST00000270061 MKNK2Q9HBH9 465 aa28.71■■■□□ 2.19
SSBP4-201ENST00000270061 ARHGEF10LQ9HCE6 1279 aa28.71■■■□□ 2.19
SSBP4-201ENST00000270061 USP17L15C9J2P7 530 aa28.7■■■□□ 2.19
SSBP4-201ENST00000270061 USP17L13C9JLJ4 530 aa28.7■■■□□ 2.19
SSBP4-201ENST00000270061 USP17L11C9JVI0 530 aa28.7■■■□□ 2.19
SSBP4-201ENST00000270061 USP17L18D6R9N7 530 aa28.7■■■□□ 2.19
SSBP4-201ENST00000270061 USP17L22D6RA61 530 aa28.7■■■□□ 2.19
SSBP4-201ENST00000270061 USP17L17D6RBQ6 530 aa28.7■■■□□ 2.19
SSBP4-201ENST00000270061 USP17L19D6RCP7 530 aa28.7■■■□□ 2.19
SSBP4-201ENST00000270061 USP17L20D6RJB6 530 aa28.7■■■□□ 2.19
SSBP4-201ENST00000270061 PDIA4P13667 645 aaKnown RBP28.7■■■□□ 2.19
SSBP4-201ENST00000270061 USP17L24Q0WX57 530 aa28.7■■■□□ 2.19
SSBP4-201ENST00000270061 PRKCZQ05513 592 aa28.7■■■□□ 2.18
SSBP4-201ENST00000270061 CHST3Q7LGC8 479 aa28.7■■■□□ 2.18
SSBP4-201ENST00000270061 CHMP4CQ96CF2 233 aa28.7■■■□□ 2.18
SSBP4-201ENST00000270061 KRT23Q9C075 422 aa28.7■■■□□ 2.18
SSBP4-201ENST00000270061 MORF4L1Q9UBU8 362 aa28.7■■■□□ 2.18
SSBP4-201ENST00000270061 GREB1LQ9C091 1923 aaPredicted RBP28.69■■■□□ 2.18
SSBP4-201ENST00000270061 GJB2P29033 226 aa28.69■■■□□ 2.18
SSBP4-201ENST00000270061 PPARAQ07869 468 aa28.69■■■□□ 2.18
SSBP4-201ENST00000270061 CLEC10AQ8IUN9 316 aa28.69■■■□□ 2.18
SSBP4-201ENST00000270061 GTF3C2Q8WUA4 911 aaPredicted RBP28.69■■■□□ 2.18
SSBP4-201ENST00000270061 ZNF333Q96JL9 665 aa28.69■■■□□ 2.18
SSBP4-201ENST00000270061 RNF41Q9H4P4 317 aaPredicted RBP28.69■■■□□ 2.18
SSBP4-201ENST00000270061 SH2D4AQ9H788 454 aa28.69■■■□□ 2.18
SSBP4-201ENST00000270061 ZNF287Q9HBT7 754 aa28.69■■■□□ 2.18
SSBP4-201ENST00000270061 RBBP6Q7Z6E9 1792 aaKnown RBP28.69■■■□□ 2.18
SSBP4-201ENST00000270061 DDX11L8A8MPP1 907 aa28.68■■■□□ 2.18
SSBP4-201ENST00000270061 MLLT1Q03111 559 aaPredicted RBP28.68■■■□□ 2.18
SSBP4-201ENST00000270061 CTDSPL2Q05D32 466 aa28.68■■■□□ 2.18
SSBP4-201ENST00000270061 APOBRQ0VD83 1088 aa28.68■■■□□ 2.18
SSBP4-201ENST00000270061 MFSD6Q6ZSS7 791 aa28.68■■■□□ 2.18
SSBP4-201ENST00000270061 COA7Q96BR5 231 aa28.68■■■□□ 2.18
SSBP4-201ENST00000270061 NEDD4P46934 1319 aa28.68■■■□□ 2.18
SSBP4-201ENST00000270061 CATSPERGQ6ZRH7 1159 aa28.67■■■□□ 2.18
SSBP4-201ENST00000270061 SH3TC2Q8TF17 1288 aa28.67■■■□□ 2.18
SSBP4-201ENST00000270061 TMEM87BQ96K49 555 aa28.67■■■□□ 2.18
SSBP4-201ENST00000270061 LLPHQ9BRT6 129 aaKnown RBP28.67■■■□□ 2.18
SSBP4-201ENST00000270061 RPAP3Q9H6T3 665 aaPredicted RBP28.67■■■□□ 2.18
SSBP4-201ENST00000270061 KANSL2Q9H9L4 492 aa28.67■■■□□ 2.18
SSBP4-201ENST00000270061 TNRC18O15417 2968 aaPredicted RBP28.67■■■□□ 2.18
SSBP4-201ENST00000270061 SIAH1Q8IUQ4 282 aa28.67■■■□□ 2.18
SSBP4-201ENST00000270061 MTA3Q9BTC8 594 aa28.67■■■□□ 2.18
SSBP4-201ENST00000270061 GABRQQ9UN88 632 aa28.67■■■□□ 2.18
SSBP4-201ENST00000270061 TMX2Q9Y320 296 aa28.67■■■□□ 2.18
SSBP4-201ENST00000270061 MKI67P46013 3256 aaKnown RBP28.66■■■□□ 2.18
SSBP4-201ENST00000270061 B4E1Z4 1266 aa28.66■■■□□ 2.18
SSBP4-201ENST00000270061 PCP11498 1178 aaKnown RBP28.66■■■□□ 2.18
SSBP4-201ENST00000270061 RASA1P20936 1047 aa28.66■■■□□ 2.18
SSBP4-201ENST00000270061 STK3Q13188 491 aa28.66■■■□□ 2.18
SSBP4-201ENST00000270061 CYB5R4Q7L1T6 521 aa28.66■■■□□ 2.18
SSBP4-201ENST00000270061 GPRC5AQ8NFJ5 357 aa28.66■■■□□ 2.18
SSBP4-201ENST00000270061 TXNRD2Q9NNW7 524 aa28.66■■■□□ 2.18
SSBP4-201ENST00000270061 TACC3Q9Y6A5 838 aa28.66■■■□□ 2.18
SSBP4-201ENST00000270061 MYH4Q9Y623 1939 aa28.66■■■□□ 2.18
SSBP4-201ENST00000270061 BAG4O95429 457 aaKnown RBP28.65■■■□□ 2.18
SSBP4-201ENST00000270061 PDIA3P30101 505 aaKnown RBP28.65■■■□□ 2.18
SSBP4-201ENST00000270061 SCRN1Q12765 414 aa28.65■■■□□ 2.18
SSBP4-201ENST00000270061 RBPJLQ9UBG7 517 aa28.65■■■□□ 2.18
SSBP4-201ENST00000270061 SYT1P21579 422 aa28.65■■■□□ 2.18
SSBP4-201ENST00000270061 FLT3LGP49771 235 aa28.65■■■□□ 2.18
SSBP4-201ENST00000270061 ATP2B2Q01814 1243 aa28.65■■■□□ 2.18
SSBP4-201ENST00000270061 LPAR1Q92633 364 aa28.65■■■□□ 2.18
SSBP4-201ENST00000270061 PAGR1Q9BTK6 254 aa28.65■■■□□ 2.18
SSBP4-201ENST00000270061 PEX10O60683 326 aa28.64■■■□□ 2.18
SSBP4-201ENST00000270061 SLC3A2P08195 630 aaKnown RBP28.64■■■□□ 2.18
SSBP4-201ENST00000270061 FGRP09769 529 aa28.64■■■□□ 2.18
SSBP4-201ENST00000270061 EEF2P13639 858 aaKnown RBP28.64■■■□□ 2.18
SSBP4-201ENST00000270061 PTMSP20962 102 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms